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UnknownA comprehensive model of tomato fruit ripening regulation by the transcription factors NOR-like1, NAC-NOR, and MADS-RIN.
Not available
S-EPMC12305540 | biostudies-literature
UnknownGenome-wide identification of long non-coding RNA targets of the tomato MADS box transcription factor RIN and function analysis.
Not available
S-EPMC6377105 | biostudies-literature
TranscriptomicsTranscriptome profiling of tomato fruits of a FRUITFULL-suppressed line and rin mutant by next generation RNA sequencing
The tomato MADS-box FRUITFULL (FUL) homologs, FUL1 and FUL2, interact with the main ripening regulator RIPENING INHIBITOR (RIN). To clarify their role in fruit ripening, we generated FUL1/FUL2-suppressed transgenic lines by RNAi. We found that five transgenic lines bearing fruits that did not ripen ...
ORGANISM(S): Solanum lycopersicum 
2014-06-23 | E-GEOD-49289 | biostudies-arrayexpress
TranscriptomicsIdentification of direct target genes of the tomato fruit-ripening regulator RIN by promoter ChIP-chip
The tomato (Solanum lycopersicum) MADS-box transcription factor RIN, one of the earliest-acting fruit-ripening regulators, is required for both ethylene-dependent and -independent regulatory pathways for fruit ripeing. Here, we performed chromatin immunoprecipitation coupled with a DNA microarray (...
ORGANISM(S): Solanum lycopersicum 
2013-03-28 | E-GEOD-40257 | biostudies-arrayexpress
TranscriptomicsGlobal gene expression analysis of normal and ripening inhibitor (rin) mutant tomatoes during ripening
Ripening is an important stage of fruit development to determine its quality as a diet. A tomato (Solanum lycopersicum) MADS-box transcription factor, RIPENING INHIBITOR (RIN), has been believed to serve as a regulator of ripening lying upstream of ethylene-dependent and ethylene-independent pathway...
ORGANISM(S): Solanum lycopersicum 
2012-04-01 | E-GEOD-28564 | biostudies-arrayexpress
TranscriptomicsUnderstanding the complexity of fruit ripening by transcriptome analysis of rin mutant fruit
[original title] Understanding the complexity of fruit ripening by transcriptome analysis of rin mutant fruit and in silico analysis of promoters of differentially regulated genes A tomato MADS-box transcription factor, LeMADS-RIN, controls fruit ripening and mutation in this gene results in non-ri...
ORGANISM(S): Solanum lycopersicum 
2012-02-29 | E-GEOD-20720 | biostudies-arrayexpress
TranscriptomicsIdentification of direct target genes of the tomato FRUITFULL homologs during ripening by promoter ChIP-chip
Tomato (Solanum lycopersicum) has two MADS-box FRUITFULL homologs, FUL1 and FUL2, both of which are able to interact with the master ripening regulator RIN. Here, we performed chromatin immunoprecipitation coupled with a DNA microarray (ChIP-chip) for the 2-kb upstream putative promoters of whole t...
ORGANISM(S): Solanum lycopersicum 
2014-06-23 | E-GEOD-49125 | biostudies-arrayexpress
UnknownTransient regulation of three clustered tomato class-I small heat-shock chaperone genes by ethylene is mediated by SlMADS-RIN transcription factor.
Not available
S-EPMC5527083 | biostudies-literature
GenomicsIdentification of direct target genes of the tomato fruit-ripening regulator RIN by promoter ChIP-chip
The tomato (Solanum lycopersicum) MADS-box transcription factor RIN, one of the earliest-acting fruit-ripening regulators, is required for both ethylene-dependent and -independent regulatory pathways for fruit ripeing. Here, we performed chromatin immunoprecipitation coupled with a DNA microarray (C...
ORGANISM(S): Solanum lycopersicum 
2013-03-28 | GSE40257 | GEO
TranscriptomicsTranscriptome profiling of tomato fruits of a FRUITFULL-suppressed line and rin mutant by next generation RNA sequencing
The tomato MADS-box FRUITFULL (FUL) homologs, FUL1 and FUL2, interact with the main ripening regulator RIPENING INHIBITOR (RIN). To clarify their role in fruit ripening, we generated FUL1/FUL2-suppressed transgenic lines by RNAi. We found that five transgenic lines bearing fruits that did not ripen ...
ORGANISM(S): Solanum lycopersicum 
2014-06-23 | GSE49289 | GEO
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