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UnknownSelecting protein targets for structural genomics of Pyrobaculum aerophilum: validating automated fold assignment methods by using binary hypothesis testing.
Not available
S-EPMC15949 | biostudies-literature
ProteomicsTSAAT060c
TSAA time 60 experiment cleavable ICAT
ORGANISM(S): Saccharomyces Cerevisiae (yeast) 
2006-12-31 | PAe000159 | PeptideAtlas
ProteomicsTSAAT000c
TSAA time 0 experiment cleavable ICAT
ORGANISM(S): Saccharomyces Cerevisiae (yeast) 
2006-12-31 | PAe000148 | PeptideAtlas
ProteomicsBuilding high-quality assay libraries for targeted analysis of SWATH MS data
Targeted proteomics by selected/multiple reaction monitoring or, on a larger scale, by SWATH MS relies on spectral reference libraries for peptide identification. Quality and coverage of these libraries are therefore of critical importance. Here we present a detailed protocol that has been successfu...
ORGANISM(S): Saccharomyces Cerevisiae (ncbitaxon:4932) 
2018-06-26 | MSV000082506 | MassIVE
ProteomicsTSAAT120c
TSAA time 120 experiment cleavable ICAT
ORGANISM(S): Saccharomyces Cerevisiae (yeast) 
2006-12-31 | PAe000089 | PeptideAtlas
ProteomicsTSAAT090c
TSAA time 90 experiment cleavable ICAT
ORGANISM(S): Saccharomyces Cerevisiae (yeast) 
2006-12-31 | PAe000088 | PeptideAtlas
ProteomicsTSAAT030c
TSAA time 30 experiment cleavable ICAT
ORGANISM(S): Saccharomyces Cerevisiae (yeast) 
2006-12-31 | PAe000086 | PeptideAtlas
ProteomicsMetaproteome plasticity sheds light on the ecology of the rumen microbiome and its connection to host traits
The arsenal of genes that microbes express reflect the way in which they sense their environment. We have previously reported that the rumen microbiome composition and its coding capacity are different in animals having distinct feed efficiency states, even when fed an identical diet. Here, we revea...
ORGANISM(S): Bos taurus (Bovine) 
2022-08-25 | PXD033418 | Pride
Feed efficient animal Rumen metaproteome Rumen microbiome Lc-ms/ms 
ProteomicsImproving Precursor Selectivity in Data Independent Acquisition Using Overlapping Windows
A major goal of proteomics research is the accurate and sensitive identification and quantification of a broad range of proteins within a sample. Data Independent Acquisition (DIA) approaches that acquire MS/MS spectra independently of precursor information have been developed to overcome the reprod...
ORGANISM(S): Bos Taurus Saccharomyces Cerevisiae 
2019-02-02 | PXD011910 | panorama
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