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GenomicsBivalent Chromatin Marks Developmental Regulatory Genes in the Mouse Embryonic Germline in Vivo
We developed a ChIP protocol for the analysis of histone marks using less than 10,000 cells per IP, and used it to investigate the chromatin state of E11.5 mouse primordial germ cells (PGCs). A genome-wide ChIP-Seq analysis of E11.5 PGCs revealed a distribution of H3K4me3/H3K27me3 bivalent domains h...
ORGANISM(S): Mus musculus 
2013-05-30 | E-GEOD-46396 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of mouse eGFP/CD3-double positive splenocytes to identify imprinted genes expressed in adult CD3+ splenocytes
Identification of imprinted genes expressed in adult CD3+ splenocytes Experiment Overall Design: For analysis of imprinted gene expression of uniparental-derived cells in adult recipients we chose eGFP/CD3-double positive splenocytes as a defined cell type, and first identified imprinted genes that ...
ORGANISM(S): Mus musculus 
2008-06-15 | E-GEOD-6757 | biostudies-arrayexpress
GenomicsmodENCODE_White Lab: genome-wide ChIP data of KW3-Pcl-D2 from D.sim_WPP on Illumina Genome Analyzer.
This is a dataset generated by the Drosophila Regulatory Elements modENCODE Project led by Kevin P. White at the University of Chicago. It contains genome-wide binding profile of the factor KW3-Pcl-D2 from D.sim_WPP generated by ChIP and analyzed on Illumina Genome Analyzer. For data usage terms an...
ORGANISM(S): Drosophila simulans 
2011-02-15 | E-GEOD-25662 | biostudies-arrayexpress
GenomicsmodENCODE_White Lab: genome-wide ChIP data of H3K27me3 from D.sim_WPP on Illumina Genome Analyzer.
This is a dataset generated by the Drosophila Regulatory Elements modENCODE Project led by Kevin P. White at the University of Chicago. It contains genome-wide binding profile of the factor H3K27me3 from D.sim_WPP generated by ChIP and analyzed on Illumina Genome Analyzer. For data usage terms and ...
ORGANISM(S): Drosophila simulans 
2011-02-15 | E-GEOD-25663 | biostudies-arrayexpress
GenomicsmodENCODE_White Lab: genome-wide ChIP data of H3K27me3 from D.sim_E0-4h on Illumina Genome Analyzer.
This is a dataset generated by the Drosophila Regulatory Elements modENCODE Project led by Kevin P. White at the University of Chicago. It contains genome-wide binding profile of the factor H3K27me3 from D.sim_E0-4h generated by ChIP and analyzed on Illumina Genome Analyzer. For data usage terms an...
ORGANISM(S): Drosophila simulans 
2011-02-15 | E-GEOD-25664 | biostudies-arrayexpress
GenomicsmodENCODE_White Lab: genome-wide ChIP data of KW3-Trl-D2 from D.pse_E0-4h on Illumina Genome Analyzer.
This is a dataset generated by the Drosophila Regulatory Elements modENCODE Project led by Kevin P. White at the University of Chicago. It contains genome-wide binding profile of the factor KW3-Trl-D2 from D.pse_E0-4h generated by ChIP and analyzed on Illumina Genome Analyzer. For data usage terms ...
ORGANISM(S): Drosophila pseudoobscura 
2011-02-15 | E-GEOD-25667 | biostudies-arrayexpress
GenomicsmodENCODE_White Lab: genome-wide ChIP data of KW3-Psq-D2 from D.pse_E0-4h on Illumina Genome Analyzer.
This is a dataset generated by the Drosophila Regulatory Elements modENCODE Project led by Kevin P. White at the University of Chicago. It contains genome-wide binding profile of the factor KW3-Psq-D2 from D.pse_E0-4h generated by ChIP and analyzed on Illumina Genome Analyzer. For data usage terms ...
ORGANISM(S): Drosophila pseudoobscura 
2011-02-15 | E-GEOD-25666 | biostudies-arrayexpress
GenomicsmodENCODE_White Lab: genome-wide ChIP data of H3K27me3 from D.pse_WPP on Illumina Genome Analyzer.
This is a dataset generated by the Drosophila Regulatory Elements modENCODE Project led by Kevin P. White at the University of Chicago. It contains genome-wide binding profile of the factor H3K27me3 from D.pse_WPP generated by ChIP and analyzed on Illumina Genome Analyzer. For data usage terms and ...
ORGANISM(S): Drosophila pseudoobscura 
2011-02-15 | E-GEOD-25668 | biostudies-arrayexpress
GenomicsmodENCODE_White Lab: genome-wide ChIP data of KW3-Kr-D2 from D.yak_E0-4h on Illumina Genome Analyzer.
This is a dataset generated by the Drosophila Regulatory Elements modENCODE Project led by Kevin P. White at the University of Chicago. It contains genome-wide binding profile of the factor KW3-Kr-D2 from D.yak_E0-4h generated by ChIP and analyzed on Illumina Genome Analyzer. For data usage terms a...
ORGANISM(S): Drosophila yakuba 
2011-02-15 | E-GEOD-25654 | biostudies-arrayexpress
GenomicsmodENCODE_White Lab: genome-wide ChIP data of KW3-Psq-D2 from D.yak_E0-4h on Illumina Genome Analyzer.
This is a dataset generated by the Drosophila Regulatory Elements modENCODE Project led by Kevin P. White at the University of Chicago. It contains genome-wide binding profile of the factor KW3-Psq-D2 from D.yak_E0-4h generated by ChIP and analyzed on Illumina Genome Analyzer. For data usage terms ...
ORGANISM(S): Drosophila yakuba 
2011-02-15 | E-GEOD-25655 | biostudies-arrayexpress
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