Mars - OmicsDI

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Unknown (2203)
Genomics (288)
Transcriptomics (204)
Proteomics (123)
Metabolomics (14)
Other (4)
Models (2)

Organisms

Homo sapiens (57)
Mus musculus (51)
Bifidobacterium breve UCC2003 (8)
Arabidopsis thaliana (8)
Bifidobacterium longum (5)
Bacillus subtilis subsp. subtilis str. 168 (4)
Bifidobacterium bifidum (3)
Lactobacillus johnsonii (3)
Schizosaccharomyces pombe (3)
Clostridium ljungdahlii (3)
Candida albicans (2)
Sus scrofa (2)
Saccharomycetaceae (1)
Apilactobacillus kunkeei (1)
Leuconostoc gasicomitatum LMG 18811 (1)
Trichinella spiralis (1)
Bifidobacterium sp. (1)
Bifidobacterium adolescentis (1)
Bifidobacterium animalis subsp. lactis BB-12 (1)
Bifidobacterium breve (1)
Lactococcus garvieae (1)
Lactobacillus helveticus (1)
Lactobacillus acidophilus NCFM (1)
Clostridium ljungdahlii DSM 13528 (1)
Oenococcus oeni (1)
Vitis riparia x Vitis berlandieri (1)
Clostridium beijerinckii NCIMB 8052 (1)
Xenopus laevis (1)
Bacillus amyloliquefaciens (1)
Aspergillus fumigatus (1)

Organisms

Mus musculus (48)
Homo sapiens (45)
food fermentation metagenome (5)
soil metagenome (5)
Gallus gallus (4)
Danio rerio (3)
Arabidopsis thaliana (3)
Arachis duranensis (2)
Komagataeibacter oboediens (2)
Novacetimonas hansenii (2)
saline spring metagenome (2)
Rhinocladiella similis (2)
indoor metagenome (2)
Theobroma cacao (2)
uncultured prokaryote (2)
Plasmodium falciparum (2)
Nematostella vectensis (2)
Priestia megaterium (2)
Methanosarcina barkeri MS (1)
Serratia liquefaciens ATCC 27592 (1)
Carnobacterium inhibens subsp. gilichinskyi (1)
Paenibacillus whitsoniae (1)
Nostoc sp. CCCryo 231-06 (1)
Niallia endozanthoxylica (1)
Paenibacillus spiritus (1)
Theobroma umbraticum (1)
Arachis cardenasii (1)
Lysinibacillus odysseyi 34hs-1 = NBRC 100172 (1)
Xenoturbella bocki (1)
Arachis stenosperma (1)

Repository

ENA (272)
biostudies-arrayexpress (149)
pride (106)
geo (68)
MetaboLights (13)
MassIVE (8)
PeptideAtlas (5)
jPOST (4)
EGA (3)
BioModels (2)
NODE (2)
EVA (1)
GNPS (1)
GPMDB (1)

Tissue

Blood plasma (32)
Blood serum (17)
Cerebrospinal fluid (13)
Plasma Non-glyco (5)
Brain (5)
Follicular fluid (4)
Heart (4)
Lung (3)
Kidney (3)
B cell (3)
Liver (3)
Blood (2)
Large intestine (2)
Small intestine (2)
Vitreous humor (2)
Stomach (2)
Pancreas (2)
Adipose tissue (2)
Skin (2)
Muscle (2)
Spleen (2)
Blood cell (2)
Cell culture (2)
Lung (1)
Mammary gland tumor cell (1)
Bone tissue (1)
Synovial tissue (1)
Glioblastoma cell (1)
Synovia (1)
Female reproductive system (1)

Disease

Lung disease (2)
Lung cancer (2)
Lymphoma (2)
Glioblastoma (2)
Colon cancer (2)
Autoimmune disorder (1)
Pre-diabetic (1)
Not Available (1)
Obesity (1)
Epiretinal membrane (1)
Urinary tract infection (1)
Female reproductive system (1)
Major depressive disorder (1)
Septic shock (1)
Stroke (1)
Age related macular degeneration (1)
Parkinsonism (1)
Stomach cancer (1)
Diffuse gastric cancer (1)
Type 1 diabetes mellitus (1)
Plasmodium falciparum malaria (1)
Brain glioblastoma multiforme (1)
Gastric adenocarcinoma (1)
Proliferative diabetic retinopathy (1)
Pancreatic ductal adenocarcinoma (1)
Cervix carcinoma (1)
Cardiovascular system disease (1)
Pancreatic cancer (1)
Osteoarthritis (1)
Alzheimer's disease (1)

Technology Type

Mass Spectrometry (106)
Shotgun proteomics (60)
Bottom-up proteomics (31)
SWATH MS (11)
Mass spectrometry (9)
Data-dependent acquisition (8)
Affinity purification coupled with mass spectrometry proteomics (7)
Data-independent acquisition (6)
Gel-based experiment (6)
HDMSE (4)
SRM/MRM (4)
NMR spectroscopy (3)
All-ion fragmentation (3)
Mass spectrometry assay (2)
PAcIFIC (1)
Mass spectrometry imaging (1)
RNA mass spectrometry (1)
MSE (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)

Instrument Platform

Illumina HiSeq 2500 (6)
NextSeq 500 (5)
MS:1000031 (5)
LTQ Orbitrap (5)
Illumina NovaSeq 6000 (3)
Q Exactive (3)
Nuclear Magnetic Resonance (NMR) - (3)
Liquid Chromatography MS - negative - reverse phase (3)
Illumina HiSeq 2000 (2)
Illumina HiSeq 4000 (2)
Flow injection analysis MS - negative (2)
Gas Chromatography MS - Positive (GC-MS (Positive)) (2)
Bravo automated liquid handling robot station (Agilent) (1)
Computer Workstation (1)
UMI small RNA library preparation kit (BGI) (1)
Handheld homogenizer, centrifuge (1)
Incubator at 35 °C, centrifuge (1)
AB SOLiD 4 System (1)
Illumina Hiseq 2000 (1)
NextSeq 2000 (1)
DNBSEQ-G400 (1)
Illumina MiSeq (1)
AB 5500xl Genetic Analyzer (1)
- (1)
Instrument (1)
Waters M Class NanoAcquity UPLC, Thermo Orbitrap Velos with ETD (1)
TripleTOF 6600 (1)
Orbitrap Fusion Lumos (1)
Gas Chromatography MS - positive - medium polarity - Flame ionisation detector MS - positive (1)
Gas Chromatography MS - positive (1)

Publication Date

2025 (33)
2022 (28)
2021 (24)
2010 (24)
2024 (23)
2013 (22)
2018 (21)
2014 (21)
2012 (20)
2023 (19)
2020 (18)
2015 (18)
2026 (17)
2011 (16)
2019 (13)
2016 (11)
2009 (11)
2017 (7)
2008 (4)
2004 (1)
2006 (1)

UNIPROT ID/AC

Q5UGI6 (5)
P22792 (5)
P08603 (5)
P04217 (5)
P04196 (5)
P02790 (5)
P02652 (5)
P01042 (5)
P00751 (5)
P00736 (5)
P00734 (5)
P19652 (5)
P02763 (5)
P00747 (5)
P00450 (5)
P05155 (5)
P02774 (5)
H7C5R1 (5)
H7C5H1 (5)
E9PFZ2 (5)
E7ETN3 (5)
C9JV77 (5)
P02787 (5)
P02765 (5)
B7Z556 (5)
Q8TCD0 (5)
Q8NEJ1 (5)
Q8N5F4 (5)
Q8N355 (5)
Q6PJF2 (5)

ENSEMBL ID

ENSG00000229353 (1)
ENSG00000170477 (1)

CHEBI ID

CHEBI:17268 (6)
CHEBI:15428 (6)
CHEBI:26806 (5)
CHEBI:17568 (5)
CHEBI:32816 (5)
CHEBI:16449 (5)
CHEBI:17234 (5)
CHEBI:18186 (5)
CHEBI:16610 (4)
CHEBI:16530 (4)
CHEBI:17148 (4)
CHEBI:15891 (4)
CHEBI:7916 (4)
CHEBI:18012 (4)
CHEBI:17596 (4)
CHEBI:16958 (4)
CHEBI:17754 (4)
CHEBI:28300 (4)
CHEBI:27266 (4)
CHEBI:17368 (4)
CHEBI:25017 (4)
CHEBI:25094 (4)
CHEBI:28044 (4)
CHEBI:78320 (4)
CHEBI:30776 (3)
CHEBI:48093 (3)
CHEBI:45441 (3)
CHEBI:70984 (3)
CHEBI:132966 (3)
CHEBI:15689 (3)

Metabolite Name

5-oxoproline (3)
Fructose (3)
Glycerol (3)
Spermidine (3)
Myo-inositol (3)
L-Tyrosine (3)
Uracil (3)
Phenylalanine (3)
Lactate (3)
Glycine (3)
Glucose (3)
Beta-alanine (3)
Uracil (3)
Glycine (3)
L-Histidine (3)
L-Threonine (3)
Harmane (2)
Guanosine-2',3'-cyclic monophosphate (2)
N6-carboxyethyllysine (2)
Ergosterol (2)
Dimethylmalonic acid (2)
O-Phospho-L-serine (2)
Indole-3-acetamide (2)
Succinimide (2)
N-alpha-acetylornithine (2)
4-hydroxycinnamate (2)
N-acetylproline (2)
Gentisate (2)
Agmatine (2)
Mevalonate (2)

First Public Date

2020 (34)
2021 (33)
2025 (30)
2026 (26)
2023 (26)
2024 (24)
2022 (24)
2019 (18)
2018 (18)
2017 (15)
2014 (8)
2016 (7)
2013 (5)
2015 (4)

Modelling Approach

Constraint-based model (2)

Lab affiliation

PROBE (7)
Proteomics Team, Nestlé Institute of Health Sciences, Lausanne, Switzerland (3)
Vanderbilt University Department of Chemistry Nashville, TN, USA (2)
Institute for Systems Biology, Seattle, WA, USA (2)
Laboratory of Biopolymer Structure, Intercollegiate Faculty of Biotechnology UG-MUG, University of Gdansk, Gdansk, Poland (2)
Head of Microbiology Unit, SCKCEN (2)
Microbial Evolution Laboratory, Centro de Astrobiologia (CSIC-INTA), 28850 Torrejón de Ardoz, Madrid, Spain (2)
Max Planck Institute of Immunobiology and Epigenetics Proteomics Unit Stuebeweg 51 79108 Freiburg Germany (2)
Prometabio Research Institute, prometabio co., ltd. (2)
Pacific Northwest National Laboratory (2)
Head Microbiology Unit, SCK CEN, Belgium (1)
Division of Infection Medicine, Department of Clinical Sciences, Lund, Lund University, Biomedical Center, Tornavägen 10, SE-22184 Lund, Sweden (1)
School of Biosciences Deputy Director Faculty of Science Mass Spectrometry Centre School of Biosciences University of Sheffield Sheffield, S10 2TN United Kingdom (1)
Deputy of the Department of Biophysical Chemistry Head of Space Biochemistry Group Elisa Richter Fellow Representative of Austria and Executive Council Member of the European Astrobiological Network EANA (1)
Proteomics Team Leader, Nestlé Institute of Health Sciences SA (1)
Laboratory of Neuroproteomics - Unicamp (1)
Guangzhou Women and Children’s Medical Center (1)
Laboratory of Neuroproteomics, Unicamp, Brazil (1)
The Australian Proteome Analysis Facility (APAF) is a service and research facility which is part of the Macquarie Analytical and Fabrication Facility (MAFF) within Macquarie University. (1)
Department of Neurology School of Medicine Oregon Health & Science University Portland, OR, USA (1)
Department of Applied Chemistry College of Applied Sciences, Kyung Hee University (1)
State Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, Huazhong Agricultural University, Wuhan, Hubei 430070, PRC (1)
Professor at Department of Microbiology and Cell Biology, Indian Institute of Science, Bangalore, India (1)
Scientist C, Biochemistry and Phytochemistry Research Division, Jubilee Centre For Medical Research, Jubilee Mission Medical Colege and Research Institute, Thrissur 680005,Kerala, India (1)
Walter and Eliza Hall Institute of medical research (1)
Grupo de Proteómica-PBR2-ProteoRed/ISCIII-Grupo de Investigación de Reumatología (GIR), Instituto de Investigación Biomédica de A Coruña (INIBIC), Complexo Hospitalario Universitario de A Coruña (CHUAC), Sergas. Universidade da Coruña, A Coruña, Spain. (1)
Sahlgrenska Center for Cancer Research, Department of Surgery, Institute of Clinical Sciences, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden (1)
Graduate Institute of Biomedical Sciences, department of Cell and Molecular Biology, College of Medicine, and Molecular Medicine Research Center, Chang Gung University, Taoyuan 33302, Taiwan. Liver Research Center, Chang Gung Memorial Hospital and Chang Gung University, Taoyuan 33302, Taiwan. (1)
Department of Obstetrics, Gynecology, and Reproductive Sciences, Center for Reproductive Sciences, University of California, San Francisco, CA 94143, USA Eli and Edythe Broad Center for Regeneration Medicine and Stem Cell Research, University of California, San Francisco, CA 94143, USA Department of Anatomy, University of California, San Francisco, CA 94143, USA (1)
Department of Molecular Medicine and Biopharmaceutical Sciences, Graduate School of Convergence Science and Technology, and College of Medicine or College of Pharmacy, Seoul National University, Seoul, Korea (1)

IsPrivate

False (2)

Submitter Keywords

FROG (2)

Classification

bacteria (3)
protozoa (2)

Modification

-17.026549 (1)
15.994915 (1)
57.021464 (1)
Not available (1)

Study type

Transcription profiling by array (77)
RNA-seq of coding RNA (30)
Comparative genomic hybridization by array (12)
MicroRNA profiling by array (4)
RNA-seq of coding RNA from single cells (4)
Unknown experiment type (3)
Transcription profiling by tiling array (3)
Other (3)
ChIP-seq (3)
Cell line - High-throughput sequencing (2)
Methylation profiling by high throughput sequencing (2)
RNA-seq of non coding RNA (2)
Cell line - Single-cell sequencing (1)
ChIP-chip by tiling array (1)
DNA-seq (1)
Methylation profiling by array (1)

Release Date

2022 (269)
2025 (255)
2021 (243)
2023 (232)
2020 (207)
2024 (199)
2019 (161)
2018 (130)
2017 (103)
2015 (83)
2016 (72)
2014 (61)
2013 (61)
2012 (51)
2010 (50)
2011 (47)
2026 (36)
2009 (34)
2008 (15)
2006 (8)
2007 (7)
2003 (7)
2001 (6)
2002 (4)
2004 (3)
1999 (3)
2005 (2)
2000 (1)
1998 (1)

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Bacillus subtilis spores, PROTECT experiment, Space-exposed and Mars-exposed vs. Earth-control

Because of their ubiquity and resistance to spacecraft decontamination, bacterial spores are considered likely potential forward contaminants on robotic missions to Mars. Thus it is important to understand their global responses to long-term exposure to space or Mars environments. As part of the PRO...

ORGANISM(S): Bacillus subtilis subsp. subtilis str. 168

2012-05-31 | E-GEOD-37124 | biostudies-arrayexpress

Root transcriptome remodeling of Arabidopsis in response to high levels of magnesium sulfate

Martian regolith (unconsolidated surface material) is a potential medium for plant growth in bioregenerative life support systems during manned missions on Mars. However, hydrated magnesium sulfate mineral levels in the regolith of Mars can reach as high as 10 wt%, and would be expected to be highly...

ORGANISM(S): Arabidopsis thaliana

2010-09-17 | E-GEOD-20109 | biostudies-arrayexpress

In Vivo Mapping of Arabidopsis Scaffold/Matrix Attachment Regions Reveals Link to Nucleosome-Disfavoring Poly(dA:dT) Tracts

Scaffold or matrix attachment regions (S/MARs) are found in all eukaryotes. The pattern of distribution and genomic context of S/MARs is thought to be important for processes such as chromatin organization and modulation of gene expression. Despite the importance of such processes, much is unknown a...

ORGANISM(S): Arabidopsis thaliana

2014-02-03 | E-GEOD-45549 | biostudies-arrayexpress

Method DNA extraction Mars simulant soil

DNA extraction method for synthetic Mars soil

PRJEB68335 | ENA

Dynamic nature of epigenetic patterns observed during the Mars 520-d mission simulation

Interplanetary human spaceflight represents a formidable medical challenge, but also provides a unique platform for investigating human adaptation to extreme environmental changes. Understanding the long-term effects of isolation has relevance in a range of scenarios and it is well recognized that a...

ORGANISM(S): Homo sapiens

2015-01-14 | E-GEOD-64950 | biostudies-arrayexpress

Wind-Driven Erosion and Exposure Potential at Mars 2020 Rover Candidate-Landing Sites.

Not available

S-EPMC5859260 | biostudies-literature

The MARS PETCARE BIOBANK protocol: establishing a longitudinal study of health and disease in dogs and cats.

Not available

S-EPMC10433631 | biostudies-literature

MARS-seq Version 2

PRJEB71494 | ENA

Additions to the "Martian Flora": new botanical records from the Mars Desert Research Station, Utah.

Not available