Mates M M - OmicsDI

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Unknown (493)
Transcriptomics (54)
Genomics (11)
Proteomics (6)
Metabolomics (4)

Organisms

Mus musculus (39)
Homo sapiens (14)
Dictyostelium discoideum (3)
Triticum aestivum (2)
Pseudomonas syringae pv. syringae B728a (1)
Schizophyllum commune (1)
Heliconius melpomene melpomene (1)
Tribolium castaneum (1)
mouse gut metagenome (1)
Bos taurus (1)
Escherichia coli K-12 (1)
Rattus norvegicus (1)
Drosophila melanogaster (1)
Danio rerio (1)
Arabidopsis thaliana (1)

Repository

biostudies-arrayexpress (64)
pride (5)
MetaboLights (4)
MassIVE (1)
ENA (1)

Tissue

Kidney (2)
Epithelial cell (1)
Flower (1)
Heart (1)

Disease

Breast cancer (1)

Technology Type

Mass Spectrometry (5)
Mass spectrometry (4)
Shotgun proteomics (4)
Chemical cross-linking coupled with mass spectrometry proteomics (1)

Instrument Platform

NextSeq 500 (6)
NextSeq 550 (2)
Illumina HiSeq 2000 (2)
Liquid Chromatography MS - positive - reverse phase (2)
HiSeq 2000 (1)
Covaris E220evolution (1)
Illumina HiSeq 1500 (1)
Illumina HiSeq 2500 (1)
Illumina NovaSeq 6000 (1)
Illumina HiSeq 4000 (1)
Orbitrap Fusion Lumos (1)
5975C Series GC/MSD (Agilent) (1)
Exactive Plus (Thermo Scientific) (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2014 (13)
2015 (10)
2013 (9)
2012 (6)
2010 (6)
2022 (4)
2021 (4)
2016 (4)
2023 (3)
2024 (2)
2018 (2)
2009 (2)
2019 (1)
2011 (1)
2008 (1)
2007 (1)
2006 (1)
2005 (1)
2025 (1)
2017 (1)
2020 (1)

CHEBI ID

CHEBI:15611 (2)
CHEBI:16027 (2)
CHEBI:16695 (2)
CHEBI:16704 (2)
CHEBI:16750 (2)
CHEBI:16811 (2)
CHEBI:16856 (2)
CHEBI:18211 (2)
CHEBI:24898 (2)
CHEBI:25017 (2)
CHEBI:26271 (2)
CHEBI:26986 (2)
CHEBI:27897 (2)
CHEBI:28044 (2)
CHEBI:29016 (2)
CHEBI:30769 (2)
CHEBI:6650 (2)
CHEBI:10072 (1)
CHEBI:10093 (1)
CHEBI:1157 (1)
CHEBI:134365 (1)
CHEBI:138395 (1)
CHEBI:14314 (1)
CHEBI:15350 (1)
CHEBI:15356 (1)
CHEBI:15428 (1)
CHEBI:15573 (1)
CHEBI:15584 (1)
CHEBI:156381 (1)
CHEBI:15652 (1)

Metabolite Name

2'-deoxycytidine (1)
2,3-Dihydroxybenzoate (1)
2-Aminoadipate (1)
2-Dehydro-D-gluconate (1)
2-Deoxyribose phosphate (1)
2-Hydroxy-2-methylsuccinate (1)
2-Isopropylmalate (1)
2-Oxo-4-methylthiobutanoate (1)
2-Oxoisovalerate (1)
2-sulfolactic acid (1)
3,4-dihydroxybenzaldehyde (1)
3-O-feruloylquinic acid (1)
3-Phosphoglycerate (1)
3-Phosphoserine (1)
3-sulfolactic acid (1)
4-Pyridoxate (1)
4-amino-5-aminomethyl-2-methylpyrimidine (1)
4-aminobenzoic acid (1)
5-Deoxyribose phosphate (1)
5-hydroxy-pipecolic acid (1)
6-Phospho-D-gluconate (1)
ADP (1)
AMP (1)
Acetyllysine (1)
Acetylphosphate (1)
Aconitate (1)
Alanine (1)
Allantoin (1)
Arginine (1)
Ascorbate (1)

First Public Date

2020 (1)

Study type

Transcription profiling by array (22)
RNA-seq of coding RNA (14)
ChIP-seq (6)
RNA-seq of non coding RNA (5)
Unknown experiment type (4)
Methylation profiling by high throughput sequencing (4)
Hi-C (3)
CUT&RUN (2)
MNase-seq (1)
Animal - High-throughput sequencing (1)
4C (1)
Comparative genomic hybridization by array (1)

Release Date

2021 (48)
2019 (46)
2022 (44)
2025 (38)
2018 (37)
2016 (37)
2017 (37)
2023 (36)
2015 (35)
2024 (33)
2020 (33)
2014 (32)
2013 (23)
2012 (21)
2010 (17)
2011 (9)
2009 (9)
2007 (6)
2008 (5)
2006 (4)
2005 (3)
2026 (3)
2004 (1)

Lab affiliation

University Hospital Cologne (2)
1. Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands 2. Netherlands Proteomics Centre, Padualaan 8, 3584 CH Utrecht, The Netherlands (1)
Head of Proteomics (1)
Medical University of Vienna (1)

Tags

xref:EuropePMC:PMC7793254 (1)

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An effective approach for identification of in vivo proteinM-bM-^@M-^SDNA binding sites from paired-end ChIP-Seq data

ChIP-Seq, which combines chromatin immunoprecipitation (ChIP) with high-throughput massively parallel sequencing, is increasingly being used for identification of proteinM-bM-^@M-^SDNA interactions in-vivo in the genome. In general, current algorithms for ChIP-seq reads employ artificial estimation ...

ORGANISM(S): Arabidopsis thaliana

2010-06-04 | E-GEOD-16940 | biostudies-arrayexpress

Transcriptome Analysis of Exercise Ancestry

Transcriptome analysis of gastrocnemius muscle RNA samples from exercise and sedentary ancestries Early life and pre-conception environmental stimuli can affect adult health-related phenotypes. Exercise training is an environmental stimulus affecting many systems throughout the body and appears to a...

ORGANISM(S): Mus musculus

2012-08-30 | E-GEOD-40469 | biostudies-arrayexpress

Predation risk regulates prey assortative mating by reducing the expected reproductive value of mates.

Not available

S-EPMC10078229 | biostudies-literature

Oncolytic viruses expressing MATEs facilitate target-independent T-cell activation in tumors.

Not available

S-EPMC11821991 | biostudies-literature

Or47b plays a role in Drosophila males' preference for younger mates.

Not available

S-EPMC4929943 | biostudies-literature

Characterization and expression analysis of MATEs in Cannabis sativa L. reveals genes involving in cannabinoid synthesis.