Mayo K K - OmicsDI

OmicsDI

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Unknown (7896)
Proteomics (59)
Transcriptomics (17)
Genomics (15)
Metabolomics (6)
Genomic (4)
Models (1)

Organisms

Andropogon gerardi (54)
Bacteria (54)
Bartonella quintana JK 31 (54)
Canis lupus familiaris (54)
Cnidaria (54)
Ectopseudomonas oleovorans CECT 5344 (54)
Ensifer adhaerens (54)
Halictus scabiosae (54)
Human immunodeficiency virus 1 (54)
Mesocricetus auratus (54)
Miscanthus x giganteus (54)
Morchella importuna (54)
Mus musculus (54)
Panicum virgatum (54)
Pseudomonas aeruginosa PA103 (54)
Pseudomonas aeruginosa SJTD-1 (54)
Rabies virus Nishigahara RCEH (54)
Rattus norvegicus (54)
Rattus rattus (54)
Rhodococcus jostii RHA1 (54)
Rhodopseudomonas palustris (54)
Shigella (54)
Sorghastrum nutans (54)
Streptococcus dysgalactiae subsp. equisimilis SK1249 (54)
Streptococcus pneumoniae (54)
Streptomyces coelicolor A3(2) (54)
Homo sapiens (19)
Mus musculus (4)
Clostridium perfringens (1)
Danio rerio (1)

Organisms

Homo sapiens (4)
Mus musculus (3)

Repository

pride (54)
biostudies-arrayexpress (20)
ENA (8)
MassIVE (5)
MetaboLights (5)
dbGaP (4)
EGA (4)
BioModels (1)
MetabolomicsWorkbench (1)

Tissue

Cell culture (20)
Blood (4)
Epithelial cell (4)
Liver (4)
Blood cell (3)
Blood plasma (3)
Fibroblast (3)
B cell (2)
Blood serum (2)
Brain (2)
Heart (2)
Kidney (2)
Leukocyte (2)
Lung (2)
Ovary (2)
Peripheral blood mononuclear cell (2)
Prostate gland (2)
Urine (2)
Feces (1)
Adipose tissue (1)
Adrenal gland (1)
B-lymphocyte (1)
Bile duct (1)
Bladder (1)
Blood platelet (1)
Bodily fluid (1)
Bone (1)
Cardiac muscle (1)
Cartilage (1)
Colon (1)

Disease

Acute leukemia (2)
Breast cancer (2)
Severe acute respiratory syndrome (2)
Irritable bowel syndrome (1)
Alpha thalassemia (1)
COVID-19 (1)
Cholangiocarcinoma (1)
Chronic myeloid leukemia (1)
Congenital disorder of glycosylation Iq (1)
Disease free (1)
Fatty liver disease (1)
Gastric adenocarcinoma (1)
Genetic disease (1)
Hemoglobinopathy (1)
Joint inflammation (1)
Malignant neoplasm of ovary (1)
Multiple myeloma (1)
Neck carcinoma (1)
Non-small cell lung carcinoma (1)
Osteogenesis imperfecta type 3 (1)
Osteogenesis imperfecta type 4 (1)
Pancreatic ductal adenocarcinoma (1)
Prostate adenocarcinoma (1)
Type 2 diabetes mellitus (1)

Technology Type

Mass Spectrometry (55)
Shotgun proteomics (24)
Bottom-up proteomics (17)
Gel-based experiment (7)
Data-dependent acquisition (6)
Mass spectrometry (3)
Affinity purification coupled with mass spectrometry proteomics (3)
Top-down proteomics (3)
NMR spectroscopy (2)
SRM/MRM (2)
Illumina Genome Analyzer II (1)
ESI (1)
Glycoproteomics (1)
SWATH MS (1)

Instrument Platform

Illumina HiSeq 2000 (3)
Liquid Chromatography MS - positive - reverse phase (3)
QExactive (2)
Bruker (2)
Liquid Chromatography MS - negative - reverse phase (2)
HP desktop (1)
Fluidics workstation (1)
Orbitrap Exploris 480 (1)
Orbitrap Fusion Lumos (1)
Q Exactive (1)
Liquid Chromatography MS – negative - reverse phase (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)
LTQ-Orbitrap (1)

Publication Date

2021 (13)
2026 (12)
2015 (10)
2024 (8)
2023 (6)
2025 (6)
2022 (5)
2014 (4)
2018 (4)
2016 (3)
2013 (3)
2012 (3)
2017 (3)
2011 (1)
2010 (1)
2009 (1)
2006 (1)
2020 (1)

CHEBI ID

CHEBI:24933 (1)
CHEBI:14484 (1)
CHEBI:6074 (1)
CHEBI:24932 (1)
CHEBI:1687 (1)
CHEBI:42317 (1)
CHEBI:1567 (1)
CHEBI:23616 (1)
CHEBI:20097 (1)
CHEBI:13960 (1)
CHEBI:23093 (1)
CHEBI:3593 (1)
CHEBI:57884 (1)
CHEBI:23094 (1)
CHEBI:3588 (1)
CHEBI:1566 (1)
CHEBI:20095 (1)
CHEBI:14734 (1)
CHEBI:25843 (1)
CHEBI:3590 (1)
CHEBI:57802 (1)
CHEBI:13961 (1)
CHEBI:46136 (1)
CHEBI:23096 (1)
CHEBI:872 (1)
CHEBI:28907 (1)
CHEBI:11417 (1)
CHEBI:19325 (1)
CHEBI:19306 (1)
CHEBI:41885 (1)

Metabolite Name

Very-low density lipoprotein (1)
High-density lipoprotein (1)
Forrnate (1)
Chitosan (1)
5,10-Methylene-THF (1)
Butyrate (1)
Propionate (1)
Vitamin K2 (1)
Riboflavin reduced (1)
10-Formyltetrahydrofolate (1)
Oxytocin (1)
QH2 (1)
L(-)-Nicotine (1)
DTDP-D-glucose (1)
Rhamnose (1)
1-Hexanol (1)
N-Formyl-L-glutamic acid (1)
Amylopectin (1)
Cysteic acid (1)
Tryptophanol (1)
Adenosine phosphosulfate (1)
Cytidine triphosphate (1)
Dimethylsulfide (1)
Farnesyl pyrophosphate (1)
Naphthalene (1)
Citicoline (1)
Ubiquinone-1 (1)
Cyclic GMP (1)
Dolichol-20 (1)
Androsterone (1)

IsPrivate

False (1)

Submitter Keywords

Not Peer Reviewed (1)

First Public Date

2020 (2)
2026 (1)
2024 (1)
2022 (1)
2021 (1)
2019 (1)
2015 (1)

Modelling Approach

Constraint-based model (1)

Modification

2x(15)N labeled L-lysine (2)
4x(15)N labeled L-arginine (2)
15.994915 (1)
4 (1)
42.010565 (1)
57.021464 (1)

Study type

Transcription profiling by array (9)
RNA-seq of coding RNA (4)
ChIP-seq (3)
Cell line - High-throughput sequencing (1)
Transcription profiling by RT-PCR (1)
Bisulfite-seq (1)
Comparative genomic hybridization by array (1)

Release Date

2022 (862)
2021 (842)
2025 (833)
2023 (806)
2024 (721)
2020 (623)
2019 (465)
2018 (464)
2017 (394)
2015 (354)
2016 (342)
2014 (257)
2013 (178)
2012 (174)
2011 (148)
2026 (134)
2010 (114)
2009 (86)
2008 (47)
2007 (25)
2006 (10)
2005 (10)
2004 (6)
2003 (5)
2002 (5)
2000 (4)
2001 (3)
1998 (2)
1999 (1)
1997 (1)

Lab affiliation

Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota 55905, United States (6)
McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, Maryland 21205 USA (4)
McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University, Baltimore, Maryland 21205 USA (3)
Department of Laboratory Medicine and Pathology & Center for Individualized Medicine Mayo Clinic Rochester MN 55905, USA (2)
Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN, USA (2)
Mayo Clinic (2)
Mayo Clinic, Department of Oncology (2)
Research Unit Protein Science, Helmholtz Center Munich, German Research Center for Environmental Health GmbH, Germany (2)
9McKusick-Nathans Institute of Genetic Medicine, 10Departments of Biological Chemistry, and 11Pathology, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA. (1)
Akhilesh Pandey, M.D., Ph.D. Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota 55905, United States (1)
College of Pharmacy, Sookmyung Women’s University, Seoul 04310, Republic of Korea. (1)
Committee on Cancer Biology, The University of Chicago, Chicago, IL, USA Department of Pathology, The University of Chicago, Chicago, IL, USA Department of Pediatrics, The University of Chicago, Chicago, IL, USA The University of Chicago Medicine Comprehensive Cancer Center, University of Chicago, Chicago, IL, USA (1)
Consultant Medical oncology (1)
Department of Biochemistry and Molecular Biology Department of Urology, Mayo clinic, Rochester MN, US (1)
Department of Biochemistry and Molecular Biology, Mayo Clinic, Rochester, MN, USA. (1)
Department of Biological Chemistry, Johns Hopkins University School of Medicine, Baltimore, MD, USA ( lab head ) (1)
Department of Laboratory Medicine and Pathology Mayo Clinic 200 First Street SW Rochester, MN 55905, USA (1)
Department of Laboratory Medicine and Pathology Mayo Clinic Rochester Minnesota (1)
Department of Laboratory Medicine and Pathology Mayo Clinic Rochester Minnesota, USA (1)
Department of Laboratory Medicine and Pathology Mayo Clinic Rochester, Minnesota 55905 United States (1)
Department of Laboratory Medicine and Pathology Mayo Clinic, Rochester, Minnesota 55905 United States (1)
Department of Laboratory Medicine and Pathology, Center for Individualized Medicine, Mayo Clinic, Rochester, MN 55905, USA (1)
Department of Laboratory Medicine and Pathology, Mayo Clinic (1)
Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN 55905 (1)
Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN 55905, USA Center for Individualized Medicine, Mayo Clinic, Rochester, MN 55905, USA (1)
Department of Molecular Genetics and Cell Biology, The University of Chicago, Chicago IL, USA (1)
Department of Molecular Genetics and Cell Biology, University of Chicago, Chicago, IL, 60637, USA (1)
Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, Minnesota, USA (1)
Endocrine Research Unit, Mayo Clinic, Rochester MN (1)
Institute of Genetic Medicine, Johns Hopkins University School of Medicine (1)