Metastatic colonization

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Unknown (702)
Genomics (281)
Transcriptomics (280)
Proteomics (27)
Other (12)
Metabolomics (7)
Clinical (1)

Organisms

Homo sapiens (221)
Mus musculus (94)
Schizophyllum commune H4-8 (18)
Mycobacterium tuberculosis SP7 (18)
Salmonella enterica subsp. enterica serovar Typhimurium str. T000240 (18)
Oryza sativa Japonica Group (18)
Rabbit calicivirus (18)
Crotalus durissus terrificus (18)
Eriocheir sinensis (18)
Candidatus Endoriftia persephonae (18)
Mycobacterium tuberculosis SP10 (18)
Mycobacterium tuberculosis SP13 (18)
Cotesia typhae (18)
Mycobacterium tuberculosis SP22 (18)
Cepaea nemoralis (18)
Enterobacter ludwigii (18)
Campylobacter jejuni (4)
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 (2)
Escherichia coli (2)
Rattus norvegicus (2)
Bacteroides fragilis NCTC 9343 (1)
Aspergillus fumigatus (1)
Neisseria meningitidis (1)
Pseudomonas putida (1)
Solanum lycopersicum (1)
Canis lupus familiaris (1)
Sus scrofa (1)
Homo (1)
Staphylococcus aureus (1)
Mus (1)

Organisms

Homo sapiens (137)
Mus musculus (73)
Homo (1)
unidentified (1)
Mus (1)
Canis lupus familiaris (1)
Staphylococcus aureus (1)
Rattus norvegicus (1)

Repository

ENA (251)
geo (223)
biostudies-arrayexpress (97)
pride (18)
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Tissue

Cell culture (7)
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Astrocyte (1)
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Bone marrow (1)
Blood serum (1)
Brain (1)
Blood plasma (1)

Disease

Brain cancer (2)
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Communicable Diseases (1)
Bone cancer (1)
Lung adenocarcinoma (1)
Cholangiocarcinoma (1)
Breast cancer (1)
Lung cancer (1)

Technology Type

Mass Spectrometry (18)
Shotgun proteomics (13)
Mass spectrometry (5)
Mass spectrometry assay (3)
Bottom-up proteomics (2)
Top-down proteomics (2)
Illumina HiSeq 2000, ILLUMINA (1)
NMR spectroscopy (1)
Gel-based experiment (1)
Data-dependent acquisition (1)
Affinity purification coupled with mass spectrometry proteomics (1)
Data-independent acquisition (1)
SWATH MS (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (3)
Illumina NovaSeq 6000 (2)
Liquid Chromatography MS - negative - reverse-phase (2)
Liquid Chromatography MS - positive - reverse phase (2)
10X Genomics Chromium v3.1 with multiplexing kit (1)
GenePix Personal 4100A [Axon Instruments] (1)
Illumina MiSeq (1)
Illumina HiSeq 2500 (1)
Illumina HiSeq 2000 (1)
Illumina HiSeq 4000 (1)
Q-Exactive (1)
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Flow injection analysis MS – POS (1)
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Liquid Chromatography MS – POS (1)
Liquid Chromatography MS - alternating - HILIC (1)
Nuclear Magnetic Resonance (NMR) - (1)
Gas Chromatography MS - (1)
Liquid Chromatography MS - positive - reverse-phase (1)

Publication Date

2026 (42)
2014 (32)
2023 (30)
2021 (26)
2022 (25)
2024 (25)
2020 (22)
2015 (21)
2013 (19)
2025 (18)
2019 (18)
2018 (14)
2011 (13)
2017 (10)
2012 (9)
2016 (8)
2010 (8)
2009 (8)
2008 (3)
2007 (1)
2005 (1)
2004 (1)

CHEBI ID

CHEBI:18243 (4)
CHEBI:30745 (3)
CHEBI:17847 (3)
CHEBI:16135 (3)
CHEBI:30746 (3)
CHEBI:30768 (3)
CHEBI:16411 (3)
CHEBI:16811 (3)
CHEBI:17768 (3)
CHEBI:15940 (3)
CHEBI:28484 (3)
CHEBI:17368 (3)
CHEBI:15887 (3)
CHEBI:15971 (3)
CHEBI:17895 (3)
CHEBI:17295 (3)
CHEBI:17053 (3)
CHEBI:15756 (3)
CHEBI:16737 (3)
CHEBI:17750 (3)
CHEBI:15354 (3)
CHEBI:16015 (3)
CHEBI:17724 (3)
CHEBI:15428 (3)
CHEBI:18183 (3)
CHEBI:37024 (3)
CHEBI:17596 (3)
CHEBI:15741 (3)
CHEBI:25017 (3)
CHEBI:30769 (3)

Metabolite Name

4-Guanidinobutanoic acid (2)
UDP-GlcNAc (2)
O-adipoylcarnitine (2)
Xanthurenic acid (2)
Kynurenic acid (2)
Quinolinic acid (2)
Cholic acid (2)
Pyruvic acid (2)
Citric acid (2)
Palmitic acid (2)
Pantothenic Acid (2)
1alpha-hydroxy-22-(3-hydroxyphenyl)-23,24,25,26,27-pentanorvitamin D3 (1)
8,12-dihydroxy-11-chloro-5Z,9Z,14Z,17Z-eicosatetraenoic acid (1)
Isoscutellarein 4'-methyl ether 8-(2'',4''-disulfatoglucuronide) (1)
9,10-Dihydro-10-(3,4-dihydroxyphenyl)-pyrano[2,3-h]catechin-8-one (1)
Hydroxyphthioceranic acid (C48) (1)
2,3-DIHYDROXY-6,7-DICHLOROQUINOXALINE (1)
Alpha-Doradexanthin/ (3S,3'S,6'R)-4-Ketolutein (1)
Monodesmethylpheniramine (1)
PI(20:5(5Z,8Z,11Z,14Z,17Z)/20:3(8Z,11Z,14Z)) (1)
1,3-(8R,9R-epoxy-octadec-13Z,15Z-dien-4,6-diynoyl)-2-(stearoyl)-sn-glycerol (1)
(¡À)-Pandamarine (1)
6-{[2-(3,4-dihydroxyphenyl)-4-oxo-6,8-bis[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]-7-[(3,4,5-trihydroxy-6-methyloxan-2-yl)oxy]-4H-chromen-5-yl]oxy}-3,4,5-trihydroxyoxane-2-carboxylic acid (1)
13,17-Dimethyltritetracontane (1)
Petunidin 3-gentiotrioside (1)
Apigenin 7-glucuronide-4'-(6''-malonylglucoside) (1)
Pyronaridine (1)
PG(21:0/22:1(11Z)) (1)
N-arachidonoyl vanillylamine (1)
Gamma-Hydroxyphenylbutazone glucuronide (1)

First Public Date

2026 (39)
2022 (31)
2024 (26)
2025 (23)
2023 (23)
2014 (22)
2020 (19)
2019 (16)
2021 (14)
2018 (14)
2017 (9)
2015 (9)
2016 (3)
2013 (3)

Classification

bacteria (1)

Study status

Completed (1)

Study type

Transcription profiling by array (73)
RNA-seq of coding RNA (8)
Other (3)
Unknown experiment type (2)
Comparative genomic hybridization by array (2)
MicroRNA profiling by array (2)
RNA-seq of total RNA (2)
High-throughput sequencing (1)
Genotyping by array (1)
Transcription profiling by RT-PCR (1)
DNA-seq (1)
RNA-seq of coding RNA from single cells (1)
Interventional (1)

Release Date

2022 (73)
2023 (72)
2021 (66)
2025 (59)
2020 (58)
2015 (54)
2016 (53)
2024 (52)
2014 (51)
2017 (48)
2019 (48)
2018 (36)
2013 (32)
2011 (23)
2012 (22)
2010 (14)
2009 (13)
2026 (10)
2007 (5)
2008 (4)
2001 (2)
2005 (1)
2004 (1)
2006 (1)
2002 (1)

Lab affiliation

Department of Human Genetics and Biochemistry Sackler School of Medicine Tel Aviv University Tel-Aviv, Israel 69978 (2)
Cancer Center and Research Institute of Intestinal Diseases, Shanghai Tenth People's Hospital, School of Medicine, Tongji University (2)
Department of Cellular & Molecular Physiology Milton S. Hershey Medical Center Penn State College of Medicine Hershey, PA, USA (1)
BioOrganic Mass Spectrometry laboratory (LSMBO) Institut Plurisciplinaire Hubert Curien University of Strasbourg. France (1)
Department of Molecular Biolgy, Princeton University, USA (1)
Department of Pathology, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Hong Kong (1)
Weill Cornell Medicine (1)
Tumour Host Interaction laboratory, The Francis Crick Institute, 1 Midland Road, NW1 1AT London (1)
Laboratory of Systems Cancer Biology, The Rockefeller University, New York, NY, USA (1)
Indiana University School of Medicine, Dept of Pediatrics; Herman B Wells Center for Pediatric Research (1)
Associate Professor, Centre for Biosystems Science and Engineering, IISC Bangalore, India (1)
Prof. Dr. Hellmut Augustin Vascular Oncology and Metastasis Deutsches Krebsforschungszentrum (DKFZ) Heidelberg (1)
Institute of Functional Genomics, University of Regensburg, Germany (1)
Spanish National Cancer Research Center (CNIO) (1)
Biozentrum, University of Basel, Switzerland (1)
Proteomics Center, Erasmus MC (1)

Location

China (1)

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Amplification of RANK- and c-Met-mediated signaling promotes metastatic colonization

We found that RANKL, expressed by cancer cells or derived from exogenous sources, consistently induced human prostate, breast, kidney, lung and liver cancer cells to colonize or metastasize to bone in an animal model of cancer bone metastasis. RANK-mediated signaling established a premetastatic nich...

ORGANISM(S): Homo sapiens

2014-02-06 | E-GEOD-48432 | biostudies-arrayexpress

Modelling organ-specific metastatic colonization of cholangiocarcinoma organoids in decellularized lung and lymph nodes

Cholangiocarcinoma (CCA) is a type of liver cancer with an aggressive phenotype and dismal outcome in patients. Current treatment options are limited, with surgical resection or transplantation the only possibility with curative intent. This becomes unavailable if CCA metastasizes to distant organs,...

ORGANISM(S): Homo sapiens (Human)

2023-01-11 | PXD038191 | Pride

SMAD4 represses FOSL1 expression and pancreatic cancer metastatic colonization

PRJNA623590 | ENA

Menin inhibition impairs metastatic colonization of Ewing sarcoma

PRJNA1493014 | ENA

Metastatic Canine Mammary Carcinomas

[original title] Metastatic Canine Mammary Carcinomas can be Identified by a Gene Expression Profile that partly Overlaps with Human Breast Cancer Profiles. Introduction: Similar to human breast cancer mammary tumors of the female dog are commonly associated with a fatal outcome due to the develop...

ORGANISM(S): Canis lupus familiaris

2010-12-01 | E-GEOD-20718 | biostudies-arrayexpress

ACSL4 and polyunsaturated lipids support metastatic extravasation and colonization

PRJNA1174147 | ENA

Tissue-derived extracellular matrix hydrogels instruct epigenetic adaptation in metastatic colonization

PRJNA1438164 | ENA

Mesenchymal cancer cell-stromal crosstalk promotes niche activation, epithelial reversion and metastatic colonization

The experiment was design to address the intrinsic differences between metastatic cancer stem cells in the primary tumour and during metastatic colonization in the mouse mammary gland tumour model MMTV-pyMT. Total RNA was prepared from the indicated cancer cells freshly isolated, stained and FACS ...

ORGANISM(S): Mus musculus

2015-11-21 | E-GEOD-63558 | biostudies-arrayexpress

Autophagic turnover of NBR1 restricts metastatic colonization during mammary tumor progression

PRJNA510992 | ENA

Metastatic medulloblastoma remodels the local leptomeningeal microenvironment to promote further metastatic colonization and growth

PRJNA1101974 | ENA

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1310 Results

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