Metazoa - OmicsDI

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Transcriptomics (12489)
Genomics (1188)
Unknown (757)
Proteomics (400)
Metabolomics (147)
Other (28)
Models (7)
Multiomics (2)

Organisms

Mus musculus (4799)
Homo sapiens (2559)
Rattus norvegicus (1181)
Drosophila melanogaster (842)
Caenorhabditis elegans (639)
Arabidopsis thaliana (404)
Sus scrofa (259)
Bos taurus (230)
Saccharomyces cerevisiae (210)
Danio rerio (178)
Gallus gallus (118)
Macaca mulatta (87)
Ovis aries (67)
Schizosaccharomyces pombe (64)
Escherichia coli (57)
Xenopus laevis (52)
Canis lupus familiaris (46)
Macaca fascicularis (38)
Zea mays (37)
Oncorhynchus mykiss (37)
Rattus rattus (33)
Triticum aestivum (32)
Oryza sativa (28)
Staphylococcus aureus (27)
Escherichia coli str. K-12 substr. MG1655 (25)
Salmo salar (21)
Schmidtea mediterranea (20)
Streptomyces coelicolor (20)
Solanum lycopersicum (20)
Mycobacterium tuberculosis (19)

Organisms

Drosophila melanogaster (23)
marine Metazoa environmental sample (8)
Homo sapiens (7)
Oscheius tipulae (4)
Caenorhabditis elegans (4)
Cylas formicarius (3)
Metazoa (3)
Rattus norvegicus (3)
Ascaris suum (2)
Milnesium tardigradum (2)
Parascaris univalens (2)
freshwater Metazoa environmental sample (2)
Mus musculus (2)
Metazoa environmental sample (1)
Condylostylus luteicoxa (1)
Trypanosoma brucei (1)
Nuclearia simplex (1)
Amoebidium parasiticum (1)
Thyreophagus entomophagus (1)
Ahypophyllus sinensis (1)
Bizionia sp. APA-3 (1)
Spinibdella lignicola (1)
Mnemiopsis leidyi (1)
Dreissena rostriformis (1)
Aurelia aurita complex sp. Pacific (1)
Sphaeroforma arctica (1)
Chelonus formosanus (1)
Harpiocephalus harpia (1)
Murina shuipuensis (1)
Morbakka virulenta (1)

Repository

biostudies-arrayexpress (13454)
MassIVE (198)
ENA (170)
MetaboLights (147)
geo (55)
PeptideAtlas (55)
EGA (48)
EVA (42)
jPOST (29)
PAXDB (29)
pride (21)
PanoramaPublic (13)
iProX (11)
GPMDB (10)
Cell Collective (7)

Tissue

Whole body (4)
Cell culture (3)
Ciliary body (2)
Permanent cell line cell (2)
Multicellular organism (1)
Dentin (1)
Haploid cell (1)
Bone (1)
Venom sac (1)
Venom (1)
Fibroblast (1)
Cell suspension culture (1)
Epithelial cell (1)

Disease

Normal (69)
Glioblastoma (4)
Adenocarcinoma (4)
Healthy (3)
Burn injury (2)
None (2)
Apparently healthy (2)
Normal (2)
Temporal lobe epilepsy (2)
Megakaryoblastic leukemia (2)
Cancer (2)
Murine hereditary hemochromatosis (2)
N/a (2)
Prostate cancer (2)
Lung cancer (2)
Breast carcinoma (2)
Control (2)
H9N2 infected (2)
Invasive ductal carcinoma (2)
Wilms tumour (2)
Breast cancer (2)
"obesity, diabetes" (1)
Inoculated with P. syringae pv. tomato strain DC3000 + avrRps4 (1)
Astrocytomas (1)
Radiation-induced DNA damage (1)
Retinoblastoma (1)
Toxicity (1)
Septic peritonitis (1)
Arrhythmias and right ventricular dysfunction (1)
Pulmonary hypertension (1)

Technology Type

Mass spectrometry (95)
Mass spectrometry assay (40)
Mass Spectrometry (21)
Shotgun proteomics (11)
NMR spectroscopy (9)
NMR spectroscopy assay (4)
Bottom-up proteomics (4)
Data-dependent acquisition (4)
Gel-based experiment (3)
Affinity purification coupled with mass spectrometry proteomics (3)
Infinium_OmniExpress-24v1.0 (1)
Illumina HiSeq 4000, ILLUMINA (1)
Applied Biosystems 3100 automated sequencer-GeneMarker v.1.6 (Softgenetics) (1)
ILLUMINA, Illumina HiSeq 2000 (1)
Illumina HiSeq 2000 (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)

Instrument Platform

Illumina NovaSeq 6000 (255)
Illumina HiSeq 2500 (180)
Illumina HiSeq 2000 (151)
NextSeq 500 (127)
Illumina HiSeq 4000 (126)
Illumina MiSeq (39)
NextSeq 550 (34)
NextSeq 2000 (31)
Axon GenePix 4000B scanning hardware (28)
- (27)
Illumina Genome Analyzer IIx (22)
Illumina HiSeq 1500 (22)
Illumina Genome Analyzer II (19)
Scanning hardware (19)
Illumina NovaSeq X (17)
Illumina HiSeq 3000 (17)
AB SOLiD 4 System (9)
GenePix 4000B [Axon Instruments] (9)
HiSeq X Ten (9)
BGISEQ-500 (8)
ScanArray 5000 [PerkinElmer] (7)
ArrayWoRx Biochip Reader [Applied Precision] (7)
DNBSEQ-G400 (7)
NucleoSpin RNA/Protein kit lysis buffer (350 µL per tube; Macherey‑Nagel). (6)
Dell PowerEdge R750; CPU: 2 × Intel Xeon Gold 6346 (32 Cores / 64 Threads); RAM: 188 GB (6)
GenePix 4000A [Axon Instruments] (6)
See manuscript (5)
PromethION (5)
Affymetrix GeneChip Scanner 3000 7G (5)
Ion Torrent Proton (5)

Publication Date

2013 (1837)
2010 (1591)
2014 (1495)
2012 (1344)
2011 (1326)
2015 (1239)
2008 (953)
2016 (808)
2009 (650)
2007 (429)
2005 (327)
2006 (228)
2023 (202)
2020 (200)
2021 (187)
2017 (184)
2018 (176)
2022 (170)
2024 (162)
2025 (146)
2019 (143)
2026 (141)
2004 (81)
2003 (12)
2002 (5)
2027 (1)

UNIPROT ID/AC

A0A1D5QWS0_MACMU (16)
TPIS_MACMU (16)
I0FUX3_MACMU (16)
F7HRN7_MACMU (16)
F7HT55_MACMU (16)
H9Z5Y2_MACMU (16)
H9FPI0_MACMU (16)
F6SPY0_MACMU (16)
A0A1D5Q3Q0_MACMU (16)
F7EDG2_MACMU (16)
I0FSL5_MACMU (16)
H9Z0R8_MACMU (16)
F6PUU7_MACMU (16)
F7FLQ1_MACMU (16)
F7E2S4_MACMU (16)
A0A1D5QLT3_MACMU (16)
A0A1D5QZ63_MACMU (16)
H9G0C4_MACMU (16)
F6QRE8_MACMU (16)
F6RLH5_MACMU (16)
F6RKI4_MACMU (16)
F6SDI5_MACMU (16)
H9EM10_MACMU (16)
9544.ENSMMUP00000014596 (16)
F7EHQ6_MACMU (16)
F7H6T9_MACMU (16)
G7N355_MACMU (16)
F7HI21_MACMU (16)
F7H0C6_MACMU (16)
H9EPW4_MACMU (16)

ENSEMBL ID

ENSECAP00000007368 (49)
ENSECAG00000021580 (49)
ENSECAG00000014414 (49)
ENSECAG00000009556 (49)
ENSECAG00000006095 (49)
ENSECAG00000004960 (49)
ENSECAP00000013223 (48)
ENSECAP00000003495 (48)
ENSECAG00000021499 (48)
ENSECAG00000019927 (48)
ENSECAG00000011847 (48)
ENSECAG00000009752 (48)
ENSECAG00000004973 (48)
ENSECAG00000001810 (48)
ENSECAG00000014858 (47)
ENSECAG00000010481 (46)
ENSECAG00000000207 (46)
ENSECAP00000007504 (44)
ENSECAG00000000548 (44)
ENSECAG00000024571 (42)
ENSECAG00000016475 (42)
ENSECAG00000012096 (42)
ENSECAG00000004201 (42)
ENSECAG00000019900 (40)
ENSECAG00000021882 (39)
ENSECAG00000015581 (39)
ENSECAG00000010107 (39)
ENSECAG00000021116 (38)
ENSECAG00000020397 (38)
ENSECAG00000014197 (38)

CHEBI ID

CHEBI:17368 (35)
CHEBI:30769 (33)
CHEBI:17596 (32)
CHEBI:15891 (31)
CHEBI:17568 (31)
CHEBI:16919 (30)
CHEBI:15428 (30)
CHEBI:16737 (29)
CHEBI:16708 (28)
CHEBI:15354 (27)
CHEBI:16704 (27)
CHEBI:15727 (26)
CHEBI:17895 (26)
CHEBI:7916 (26)
CHEBI:17295 (25)
CHEBI:16015 (25)
CHEBI:18257 (25)
CHEBI:18132 (24)
CHEBI:16750 (24)
CHEBI:16335 (24)
CHEBI:18012 (23)
CHEBI:17154 (23)
CHEBI:18050 (23)
CHEBI:17268 (23)
CHEBI:17750 (23)
CHEBI:15741 (23)
CHEBI:16040 (22)
CHEBI:18211 (22)
CHEBI:16828 (22)
CHEBI:17822 (22)

Metabolite Name

Hypoxanthine (28)
Inosine (26)
Uracil (25)
Taurine (24)
L-Tyrosine (23)
Creatinine (23)
Choline (21)
Xanthine (21)
Creatine (20)
Adenine (20)
Guanosine (20)
L-Phenylalanine (19)
Carnosine (19)
L-Tryptophan (18)
Citric acid (18)
L-Glutamine (17)
Ornithine (17)
Cytidine (17)
Uridine (17)
L-Threonine (16)
Cytosine (16)
Glycine (16)
Betaine (16)
Azelaic acid (16)
Spermidine (15)
Hexadecanedioic acid (15)
Glutathione (15)
L-Arginine (15)
L-Histidine (15)
Thymine (15)

First Public Date

2022 (21)
2026 (19)
2018 (18)
2024 (17)
2025 (14)
2014 (13)
2023 (11)
2020 (11)
2017 (11)
2021 (10)
2015 (8)
2013 (7)
2019 (6)
2016 (4)

Classification

helminths (2)
protozoa (1)

Study type

Transcription profiling by array (8489)
RNA-seq of coding RNA (1418)
ChIP-seq (689)
Unknown experiment type (498)
ChIP-chip by tiling array (491)
RNA-seq of non coding RNA (287)
Comparative genomic hybridization by array (217)
Other (166)
Methylation profiling by array (160)
RNA-seq of coding RNA from single cells (155)
Methylation profiling by high throughput sequencing (151)
Transcription profiling by tiling array (120)
DNA-seq (69)
ChIP-chip by array (62)
Animal - High-throughput sequencing (59)
Proteomic profiling by array (48)
RNA-seq of total RNA (40)
MicroRNA profiling by array (33)
Animal - One-color microarray (31)
Transcription profiling by RT-PCR (29)
Genotyping by array (28)
Transcription profiling by SAGE (21)
Cell line - High-throughput sequencing (14)
ATAC-seq (14)
RNAi profiling by array (11)
MicroRNA profiling by high throughput sequencing (11)
Bisulfite-seq (10)
Single nucleus RNA sequencing (10)
Human - One-color microarray (8)
High-throughput sequencing (7)

Release Date

2013 (1873)
2010 (1631)
2014 (1475)
2012 (1372)
2011 (1348)
2015 (1247)
2008 (978)
2016 (838)
2009 (666)
2007 (441)
2005 (335)
2006 (242)
2020 (204)
2017 (196)
2021 (189)
2023 (178)
2018 (178)
2022 (170)
2019 (154)
2024 (137)
2025 (132)
2026 (99)
2004 (86)
2003 (16)
2002 (12)
2001 (8)
1997 (2)
2000 (1)
1999 (1)
1998 (1)

Lab affiliation

Proteomics & Metabolomics Facility, Center for Open Research Resources & Equipment University of Connecticut Storrs, CT 06269 (2)
North Carolina State University (2)
Johannes Gutenberg University, Mainz, Germany (1)
Mark C. Field Professor of Cell Biology and Parasitology Division of Biological Chemistry & Drug Discovery School of Life Sciences University of Dundee Dundee United Kingdom (1)
Developmental Biology Unit, European Molecular Biology Laboratory, 69117 Heidelberg, Germany. (1)
Genome Biology Unit, European Molecular Biology Laboratory, 69117 Heidelberg, Germany. (1)
Developmental Biology Unit, European Molecular Biology Laboratory, 69117 Heidelberg, Germany Proteomics Core Facility, European Molecular Biology Laboratory, 69117 Heidelberg, Germany (1)
Metazoa Phylogenomics & Genome Evolution Lab, Institute of Evolutionary Biology (CSIC-UPF) (1)
Center for Molecular Biology of Heidelberg University (ZMBH), DKFZ-ZMBHAlliance, Im Neuenheimer Feld 282, D-69120 Heidelberg, Germany (1)
Metazoa Phylogenomics & Genome Evolution Lab, Institute of Evolutionary Biology (CSIC-UPF). Passeig Marítim de la Barceloneta 37-49; 08003 Barcelona; Spain (1)
Bioanalytical Mass Spectrometry, Max Planck Institute for Multidisciplinary Sciences, Göttingen, Germany University Medical Center Göttingen, Institute of Clinical Chemistry, Bioanalytics Group, Göttingen, Germany Cluster of Excellence "Multiscale Bioimaging: from Molecular Machines to Networks of Excitable Cells" (MBExC), University of Göttingen, Germany (1)
ProGenTomics, Laboratory of Pharmaceutical Biotechnology, Faculty of Pharmaceutical Sciences, Ghent University, Belgium (1)
Network pharmacology, Institute of Pharmaceutical Sciences, University of Graz, Austria (1)
Max Planck Research Group Leader, Quantitative RNA Biology OWL, MPIMG Berlin, Germany (1)
Proteomics Unit, Centre de Regulació Genòmica, Dr. Aiguader 88, 08003 Barcelona (1)
Department of Chemistry, School of Physical SciencesUniversity of Adelaide, Adelaide Australia, 5005 (1)
CNIO (1)
Proteomics Unit Max Planck Institute of Immunobiology and Epigenetics (1)
Proteome Dynamics Group, Max Delbrueck Center, Berlin, Germany (1)

15046 Results

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Organisms

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CHEBI ID

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