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TranscriptomicsTranscription profiling of Methanosarcina mazei grown with trimethylamine or methanol to investigate the expression pattern of methyltransferase genes
The genomic expression patterns of Methansarcina mazei growing with trimethylamine or methanol were measured.
ORGANISM(S): Methanosarcina mazei 
2009-08-05 | E-MEXP-2108 | biostudies-arrayexpress
ProteomicsMtr complex and MtrI quantification from Methanosarcina mazei
This dataset contains LC-MS/MS data from multiple experiments investigating the N⁵-methyltetrahydromethanopterin:CoM-S-methyltransferase (Mtr) complex of Methanosarcina mazei, with quantitative analysis performed using MaxQuant. Experiment 1: Strep-Tactin-based purification of the native Mtr comple...
ORGANISM(S): Methanosarcina mazei Go1 
2026-01-19 | PXD064689 | Pride
Archaea Methanogen Methanosarcina Mtr complex Maxquant Small protein 
TranscriptomicsTranscription profiling of Methanosarcina mazei Goe1 in response to bismuth nitrate.
Pattern of gene expression of M. mazei in response to 10 uM bismuth nitrate was analyzed relative to gene expression pattern of M. mazei grown in the presence of 30 uM potassium nitrate (control cultures). Therefore, five pre-cultures of M. mazei was grown to mid-exponential growth-phase. Then, the ...
ORGANISM(S): Methanosarcina mazei 
2011-10-01 | E-MTAB-787 | biostudies-arrayexpress
ProteomicsSmall ORF16 modulates the Mtr complex activity in Methanosarcina mazei depending on the molecular hydrogen availability
Small open reading frame (small ORF)-encoded proteins, with less than 100 amino acids in length, have attracted increasing attention over the past decade after being largely overlooked due to limitations in classical bioinformatics and biochemical methodologies. For the mesophilic archaeal model sys...
ORGANISM(S): Methanosarcina mazei Go1 
2026-09-07 | PXD064332 | Pride
Tetrahydrosarcinapterin s-methyltransferase (mtr) Small orf encoded proteins Methanosarcina mazei Lc msms 
GenomicsMethanosarcina mazei strain:JL01
Methanosarcina mazei strain:JL01 Genome sequencing
PRJNA471916 | ENA
ProteomicsQuantitative analsysis of short open reading frame encoded proteins from Methanosarcina mazei under stress conditions via bottom up proteomics
In the present work we have analysed Methanosarcina mazei grown under different stressor conditions via quantitative bottom-up proteomic workflows to determine which SEP are differenitally abundant in responce to stress conditions
ORGANISM(S): Methanosarcina mazei Go1 
2024-09-24 | PXD055748 | Pride
Quantitative bottom-up proteomics Methanosarcina mazei Lc-ms/ms 
GenomicsMethanosarcina mazei strain:TMA
Genome sequencing of methanogenic archaeon Methanosarcina mazei TMA
PRJDB8302 | ENA
ProteomicsExploring the hidden world of Methanosarcina mazei: Unravelling the secrets of its small proteome and its nitrogen-dependent regulation
The mesophilic methanogenic archaeal model organism Methanosarcina mazei strain Gö1, is crucial for climate and environmental research due to its ability to produce methane from H2 plus CO2, acetate, and methylamines. Here, we established the first Ribo-seq protocol for M. mazei strain Gö1 under two...
ORGANISM(S): Methanosarcina mazei Go1 
2024-08-02 | PXD045039 | Pride
Archaea  methanoarchaea  ribosome profiling  ribo-seq  small proteome  sorf  nitrogen  dual function srna 
GenomicsMethanosarcina mazei strain:zm-15
Methanosarcina mazei strain:zm-15 Raw sequence reads
PRJNA1175459 | ENA
GenomicsMethanosarcina mazei Tuc01
Methanosarcina mazei Tuc01 Genome sequencing
PRJNA176295 | ENA
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