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Unknown
(140420)
Transcriptomics
(12727)
Genomics
(8959)
Proteomics
(8129)
Metabolomics
(2046)
Clinical
(502)
Genomic
(80)
Other
(67)
Methylation profiling
(38)
Models
(26)
Multiomics
(7)
Organisms
Homo sapiens
(7636)
Mus musculus
(5397)
Rattus norvegicus
(1250)
Arabidopsis thaliana
(785)
Saccharomyces cerevisiae
(616)
Drosophila melanogaster
(344)
Escherichia coli
(339)
Caenorhabditis elegans
(284)
Bos taurus
(249)
Danio rerio
(203)
Gallus gallus
(136)
Sus scrofa
(129)
Oryza sativa
(105)
Staphylococcus aureus
(83)
Zea mays
(78)
Thermus thermophilus HB8
(71)
Schizosaccharomyces pombe
(62)
Candida albicans
(60)
Oncorhynchus mykiss
(51)
Macaca mulatta
(46)
Salmo salar
(42)
Escherichia coli str. K-12 substr. MG1655
(38)
Trypanosoma brucei
(35)
Oryza sativa Japonica Group
(32)
Mycobacterium tuberculosis
(29)
Escherichia coli K-12
(23)
Nicotiana tabacum
(8)
cellular organisms
(8)
Mus sp.
(2)
Rattus
(2)
Organisms
Mus musculus
(2582)
Homo sapiens
(1119)
Rattus norvegicus
(566)
phyllosphere metagenome
(136)
soil metagenome
(96)
Danio rerio
(89)
Arabidopsis thaliana
(62)
Sus scrofa
(41)
Saccharomyces cerevisiae
(39)
Bos taurus
(36)
Drosophila melanogaster
(35)
Escherichia coli
(29)
Macaca mulatta
(26)
Lotus japonicus
(23)
Oncorhynchus mykiss
(22)
mouse gut metagenome
(22)
insect metagenome
(22)
Caenorhabditis elegans
(21)
Ovis aries
(20)
Pimephales promelas
(20)
Macaca fascicularis
(16)
feces metagenome
(16)
Oryza sativa
(16)
Gallus gallus
(16)
activated sludge metagenome
(15)
Glycine max
(15)
Canis lupus familiaris
(15)
Solanum lycopersicum
(14)
mosquito metagenome
(12)
Escherichia coli str. K-12 substr. MG1655
(12)
Repository
biostudies-arrayexpress
(11719)
ENA
(7984)
pride
(7579)
geo
(1997)
MetaboLights
(1826)
MassIVE
(243)
iProX
(155)
MetabolomicsWorkbench
(150)
EGA
(135)
jPOST
(85)
dbGaP
(80)
GNPS
(58)
NODE
(28)
BioModels
(25)
PeptideAtlas
(22)
PanoramaPublic
(14)
GPMDB
(10)
LINCS
(5)
PAXDB
(4)
EVA
(3)
ExpressionAtlas
(1)
Cell Collective
(1)
Tissue
Blood
(43)
Liver
(16)
Cultured cells
(13)
Eye tissue
(10)
Muscle
(10)
Adipose tissue
(8)
Macrophages
(8)
Brain
(7)
Unspecified
(6)
Feces
(5)
Bacterial cells
(4)
Colon
(3)
Kidney
(3)
Heart
(2)
Intestine
(2)
Mesenteric lymph
(2)
Urine
(2)
Whole animals
(2)
Breast milk
(1)
Cells
(1)
Cyst fluid
(1)
Diet
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(1)
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(1)
Fibroblast cells
(1)
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(1)
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(1)
Lung
(1)
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(1)
Neurons
(1)
Disease
Breast cancer
(184)
Colon cancer
(105)
Normal
(92)
Melanoma
(45)
Lung cancer
(39)
Parkinson's disease
(33)
Lymphoma
(32)
Neuroblastoma
(21)
Obesity
(21)
Glioblastoma
(20)
Prostate cancer
(6)
Rheumatoid arthritis
(4)
Reference
(4)
Carcinoma
(4)
Primary tumor
(3)
Chronic lymphocytic leukemia
(3)
Wilms tumour
(3)
Tumor
(2)
Hypertension
(2)
Squamous Cell Carcinoma
(2)
Breast adenocarcinoma
(2)
Porphyria NOS
(2)
Acute lymphoblastic leukemia
(2)
Leukemia
(2)
Megakaryoblastic leukemia
(2)
Chronic myelogenous leukemia
(2)
Cancer
(2)
Sarcoma
(2)
Mammary tumor
(2)
Cholesterol ester storage disease
(1)
Technology Type
Mass Spectrometry
(7728)
Shotgun proteomics
(4043)
Bottom-up proteomics
(1474)
Mass spectrometry
(1163)
Affinity purification coupled with mass spectrometry proteomics
(1013)
Data-dependent acquisition
(902)
Mass spectrometry assay
(588)
Gel-based experiment
(432)
ESI
(136)
NMR spectroscopy
(75)
EI
(16)
NMR spectroscopy assay
(10)
Illumina 15K
(8)
Affymetrix OncoScan FFPE Express
(1)
ILLUMINA, NextSeq 500
(1)
ISelect Beadchip
(1)
Illumina Genome Analyzer II, Illumina HiSeq 2000
(1)
Illumina Genome Analyzer IIx, Illumina HiSeq 2000
(1)
Illumina HiSeq 2000
(1)
Illumina HiSeq 2000, Illumina Genome Analyzer IIx
(1)
Infinium Omni2.5M
(1)
Chemiluminescence
(1)
DNA sequencing
(1)
ELISA
(1)
Fluorescence intensity
(1)
KiNativ
(1)
Mass spectrometry
(1)
PCR
(1)
RNA-seq
(1)
NMR
(1)
Instrument Platform
Illumina NovaSeq 6000
(356)
NextSeq 500
(230)
Illumina HiSeq 2500
(180)
Illumina HiSeq 2000
(170)
Illumina HiSeq 4000
(129)
NextSeq 550
(60)
NextSeq 2000
(44)
Illumina NovaSeq X
(37)
Illumina MiSeq
(34)
Illumina HiSeq 1500
(28)
Illumina Genome Analyzer IIx
(20)
GenePix 4000B [Axon Instruments]
(20)
Axon GenePix 4000B scanning hardware
(20)
Illumina HiSeq 3000
(20)
Axon GenePix 4000A scanning hardware
(17)
Illumina Genome Analyzer II
(16)
Scanning hardware
(16)
Axon- GenePix4000B
(14)
G2565BA DNA microarray scanner [Agilent]
(14)
HiSeq X Ten
(14)
N/A
(13)
DNBSEQ-G400
(13)
GenePix 4000A [Axon Instruments]
(12)
418 [Affymetrix]
(11)
BGISEQ-500
(11)
G2565AA DNA microarray scanner [Agilent]
(10)
Ion Torrent Proton
(9)
Illumina HiSeq 1000
(9)
Maxwell RSC Instrument
(7)
ScanArray 5000 [PerkinElmer]
(7)
Publication Date
2026
(1936)
2025
(1922)
2010
(1459)
2024
(1451)
2013
(1424)
2022
(1412)
2014
(1412)
2023
(1361)
2015
(1272)
2021
(1211)
2012
(1176)
2020
(1046)
2011
(1046)
2016
(983)
2019
(905)
2008
(792)
2018
(721)
2009
(577)
2017
(571)
2007
(415)
2006
(244)
2005
(215)
2004
(119)
2003
(35)
2027
(5)
2002
(1)
UNIPROT ID/AC
P01130
(1)
P04180
(1)
P06858
(1)
P07522
(1)
P10113
(1)
P11345
(1)
P11597
(1)
P21708
(1)
P25427
(1)
P35739
(1)
P36506
(1)
P47196
(1)
P47197
(1)
P47736
(1)
P50904
(1)
P63086
(1)
P98155
(1)
Q00341
(1)
Q01986
(1)
Q05469
(1)
Q62636
(1)
Q63484
(1)
Q63531
(1)
Q6PIU2
(1)
Q8WTV0
(1)
Q99MC6
(1)
Q9QX70
(1)
Q9QYV3
(1)
Q9Z1I1
(1)
Q9Z1I2
(1)
ENSEMBL ID
ENSG00000147251
(8)
ENSG00000170477
(8)
ENSG00000247315
(3)
ENSRNOP00000009359
(1)
CHEBI ID
CHEBI:32816
(189)
CHEBI:16761
(5)
CHEBI:15422
(4)
CHEBI:6801
(4)
CHEBI:16108
(3)
CHEBI:16908
(3)
CHEBI:14314
(2)
CHEBI:15361
(2)
CHEBI:15765
(2)
CHEBI:15846
(2)
CHEBI:16001
(2)
CHEBI:16474
(2)
CHEBI:16526
(2)
CHEBI:16905
(2)
CHEBI:17234
(2)
CHEBI:17665
(2)
CHEBI:17754
(2)
CHEBI:17794
(2)
CHEBI:17835
(2)
CHEBI:18009
(2)
CHEBI:18021
(2)
CHEBI:18367
(2)
CHEBI:25212
(2)
CHEBI:28013
(2)
CHEBI:29052
(2)
CHEBI:15343
(1)
CHEBI:15699
(1)
CHEBI:15721
(1)
CHEBI:15836
(1)
CHEBI:15946
(1)
Metabolite Name
Hypoxanthine
(306)
Uridine
(287)
Adenine
(275)
Uracil
(273)
Adenosine
(268)
Inosine
(268)
Creatine
(266)
Guanosine
(251)
Taurine
(249)
L-Phenylalanine
(241)
L-Tyrosine
(239)
Guanine
(227)
Choline
(224)
L-Tryptophan
(222)
Xanthine
(219)
Creatinine
(216)
Cytosine
(213)
L-Histidine
(213)
Citric acid
(211)
Betaine
(207)
L-Proline
(200)
Azelaic acid
(195)
Riboflavin
(193)
Xanthosine
(190)
Ornithine
(188)
L-Glutamine
(187)
Cytidine
(186)
L-Valine
(185)
L-Threonine
(184)
Thymine
(182)
First Public Date
2014
(1153)
2025
(1094)
2026
(1011)
2024
(971)
2023
(691)
2022
(522)
2021
(471)
2018
(459)
2020
(449)
2017
(382)
2019
(337)
2015
(223)
2016
(137)
2013
(80)
2012
(3)
2011
(1)
Modelling Approach
Ordinary differential equation model
(20)
Physiologically based pharmacokinetic model
(6)
Delayed differential equation model
(1)
Study status
Completed
(252)
Recruiting
(97)
Not provided
(48)
Active, not recruiting
(44)
Not yet recruiting
(32)
Terminated
(12)
Ongoing
(7)
Withdrawn
(6)
Enrolling by invitation
(2)
Suspended
(2)
Lab affiliation
Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA., Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA
(68)
Department of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461, United States
(34)
Amsterdam UMC, Vrije Universiteit Amsterdam, Medical Oncology, Cancer Center Amsterdam, OncoProteomics Laboratory, Amsterdam, Netherlands
(25)
Head of the Curie Institute Mass Spectrometry Platform
(25)
EDyP
(24)
University of Oxford
(24)
University of Vienna, Faculty of Chemistry, Department of Analytical Chemistry
(18)
Institute for Research in Immunology and Cancer, Department of Biochemistry, Department of Chemistry, Université de Montréal, Québec, Canada H3T 1J4
(16)
The University of Melbourne
(15)
CRUK - Beatson Institute for Cancer Research - Switchback Rd, Bearsden, Glasgow G61 1BD - United Kingdom
(14)
Department of Biochemistry and Functional Proteomics, Institute of Biology II, Faculty of Biology and BIOSS Centre for Biological Signalling Studies, University of Freiburg, 79104 Freiburg im Breisgau, Germany
(14)
Institute of Molecular Biology (IMB), Mainz, Germany
(14)
Moffitt Cancer Center Tampa, FL, USA
(14)
iBET – Instituto de Biologia Experimental e Tecnológica, Av. da República, Oeiras, 2780-157, Portugal
(14)
Harvard Medical School
(13)
OncoProteomics Laboratory, Dept of Medical Oncology, VU University Medical Center, Amsterdam, The Netherlands
(13)
University of Washington
(12)
Wageningen University
(12)
Basic Immune System of Plants / Protein Mass Spectrometry Max Planck Institute for Plant Breeding Research Carl-von-Linne-Weg 10, 50829 Cologne, Germany
(11)
Department of Microbiology and Immunology, University of Melbourne at the Peter Doherty Institute for Infection and Immunity, Melbourne 3000, Australia
(11)
The University of Sydney
(11)
Chair of Biochemistry II, Theodor Boveri-Institute, Biocenter, University of Würzburg, Würzburg, Germany
(10)
IRCCS Istituto G Gaslini
(10)
NCI/NIH CSB
(10)
Proteomics facility, Central Science Laboratory, University of Tasmania
(10)
Michigan State University
(9)
University of Edinburgh
(9)
Chair of Proteomics and Bioanalytics, Technische Universität München, Germany
(8)
Department of Neurobiology, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA
(8)
Instituto de Investigaciones Sanitarias de Santiago de Compostela
(8)
Tags
pathogen
(167)
pathogen:bacterium
(133)
pathogen:fungus
(24)
xref:PubMed:38102116
(10)
xref:PubMed:32904430
(9)
wastewater
(9)
xref:PubMed:19417177
(7)
xref:PubMed:26377693
(7)
xref:PubMed:28763742
(6)
xref:PubMed:41397953
(6)
xref:PubMed:19265543
(6)
xref:PubMed:30744511
(6)
xref:PubMed:21503142
(6)
xref:PubMed:29069476
(6)
xref:PubMed:37709764
(5)
xref:PubMed:37142692
(5)
xref:PubMed:36109165
(5)
xref:PubMed:22461453
(5)
xref:PubMed:26361796
(5)
xref:PubMed:23028787
(5)
xref:PubMed:33125892
(5)
xref:PubMed:33761883
(5)
xref:PubMed:38954486
(5)
xref:PubMed:26730594
(5)
xref:PubMed:31211793
(5)
xref:PubMed:29625381
(5)
pathogen:protozoan
(5)
xref:PubMed:35440735
(4)
xref:PubMed:37248279
(4)
xref:PubMed:39805955
(4)
Keyword
Oxaliplatin
(30)
Bevacizumab
(28)
Leucovorin
(27)
Fluorouracil
(22)
Capecitabine
(21)
Irinotecan
(16)
Cetuximab
(12)
Aspirin
(8)
Levoleucovorin
(8)
Lanreotide
(7)
Panitumumab
(7)
Pembrolizumab
(6)
Folic Acid
(5)
CRC
(4)
Chemotherapy
(4)
Colorectal
(3)
Durvalumab
(3)
FOLFIRI
(3)
GIST
(3)
MCRC
(3)
Metastatic Colorectal Cancer
(3)
Sunitinib
(3)
Trombyl
(3)
5-fluorouracil
(2)
Adiro 100 mg
(2)
Anti-EGFR antibody
(2)
Antibodies
(2)
Antibodies, Monoclonal
(2)
BRAF
(2)
Colorectal cancer,
(2)
IsPrivate
False
(25)
Model Flag
Non Kinetic
(2)
Submitter Keywords
TransQST
(2)
Immuno-oncology
(1)
Classification
bacteria
(133)
fungi
(24)
protozoa
(5)
helminths
(3)
viruses
(2)
Modification
2x(15)N labeled L-lysine
(29)
4x(15)N labeled L-arginine
(29)
4-tetrahydrothiazine-3-carboxylic acid
(22)
N6
(15)
Not available
(14)
15.994915
(9)
57.021464
(9)
N6-dimethyl-L-lysine
(8)
+3amu)
(5)
4x(2)H labeled dimethylated residue
(5)
15.99491
(4)
42.010565
(4)
57.02146
(4)
79.966331
(4)
-17.026549
(3)
4
(3)
-17.0266
(1)
-18.010565
(1)
0.984
(1)
0.984016
(1)
0.9840160012245178
(1)
14.01565
(1)
15.994915008544922
(1)
19.989829
(1)
27.994915
(1)
28.0313
(1)
3.994915
(1)
3x(2)H labeled N6-acetyl-L-lysine
(1)
4-dinitrophenyl modified residue
(1)
43.00581
(1)
Study type
Transcription profiling by array
(7833)
RNA-seq of coding RNA
(1187)
ChIP-seq
(560)
ChIP-chip by tiling array
(239)
RNA-seq of coding RNA from single cells
(220)
Comparative genomic hybridization by array
(216)
Methylation profiling by array
(174)
Other
(151)
ChIP-chip by array
(129)
RNA-seq of non coding RNA
(113)
Unknown experiment type
(110)
Methylation profiling by high throughput sequencing
(88)
RNA-seq of total RNA
(63)
Transcription profiling by tiling array
(50)
DNA-seq
(49)
MicroRNA profiling by array
(41)
Animal - High-throughput sequencing
(40)
Transcription profiling by RT-PCR
(32)
High-throughput sequencing
(28)
Proteomic profiling by array
(25)
RNAi profiling by array
(24)
Cell line - High-throughput sequencing
(23)
Genotyping by array
(23)
RIP-seq
(23)
MicroRNA profiling by high throughput sequencing
(17)
ATAC-seq
(17)
Single nucleus RNA sequencing
(16)
Animal - One-color microarray
(15)
Transcription profiling by SAGE
(13)
Bisulfite-seq
(10)
Release Date
2022
(17315)
2023
(15476)
2021
(14898)
2025
(14461)
2024
(12869)
2020
(12132)
2019
(9150)
2018
(8289)
2017
(6893)
2016
(6487)
2015
(6137)
2014
(5557)
2013
(4455)
2012
(3589)
2010
(3076)
2011
(2966)
2026
(2382)
2009
(1697)
2008
(1575)
2007
(815)
2006
(538)
2005
(421)
2004
(284)
2003
(159)
2002
(127)
2000
(123)
2001
(106)
1999
(77)
1998
(54)
1997
(13)
Location
Japan
(136)
India
(51)
United States
(44)
China
(36)
Italy
(29)
Australia
(28)
Spain
(23)
France
(22)
Iran
(22)
Germany
(20)
Netherlands
(19)
United Kingdom
(16)
South Korea
(15)
Canada
(14)
Taiwan
(14)
Belgium
(13)
Greece
(11)
New Zealand
(10)
Austria
(9)
Brazil
(8)
Thailand
(8)
Egypt
(7)
Hungary
(7)
Poland
(7)
Sweden
(7)
Denmark
(6)
Mexico
(6)
Switzerland
(6)
Argentina
(5)
Czechia
(5)
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Streptomyces sp. MG strain:MG
Streptomyces sp. MG strain:MG Genome sequencing and assembly
PRJNA448823
|
ENA
Cite
Methanogenium sp. MK-MG
Methanogenium sp. MK-MG Genome sequencing and assembly
PRJNA557565
|
ENA
Cite
Virgibacillus sp. MG-45
Virgibacillus sp. MG-45 Genome sequencing and assembly
PRJNA1047330
|
ENA
Cite
Pseudomonas sp. MG-9
Pseudomonas sp. MG-9 Genome sequencing and assembly
PRJNA732435
|
ENA
Cite
Enterobacter sp. MG-EB028
Enterobacter sp. MG-EB028 Genome sequencing
PRJNA1278930
|
ENA
Cite
Micrococcus sp. MG-2010-D12
Micrococcus sp. MG-2010-D12 Genome sequencing
PRJNA280803
|
ENA
Cite
Acidithiobacillus ferrianus strain:MG
Acidithiobacillus ferrianus strain:MG Genome sequencing and assembly
PRJNA590957
|
ENA
Cite
Actinomyces oris strain:MG-1
Actinomyces oris strain:MG-1 Genome sequencing and assembly
PRJNA327886
|
ENA
Cite
Brevibacterium sediminis strain:MG-1
Brevibacterium sediminis strain:MG-1 Genome sequencing and assembly
PRJNA546498
|
ENA
Cite
Micromonospora fiedleri strain:MG-37
Micromonospora fiedleri strain:MG-37 Genome sequencing and assembly
PRJNA693505
|
ENA
Cite
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