Mi Z Z - OmicsDI

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Proteomics (375)
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Homo sapiens (233)
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Repository

pride (331)
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Technology Type

Mass Spectrometry (331)
Shotgun proteomics (168)
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MSE (3)
SRM/MRM (3)
All-ion fragmentation (2)
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Instrument Platform

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Illumina NovaSeq 6000 (7)
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Gas Chromatography MS - Positive (GC-MS (Positive)) (5)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (5)
Liquid Chromatography MS - positive - reverse-phase (5)
Bruker (4)
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- (1)
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Publication Date

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2019 (14)
2009 (13)
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2007 (5)
2004 (4)
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UNIPROT ID/AC

547559.Nmag_1187 (2)
6PGD_HALVD (2)
AGL10_HALVD (2)
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P07663 (1)
Q59E16 (1)
Q9TW49 (1)
Q9VMS4 (1)

CHEBI ID

CHEBI:30769 (48)
CHEBI:28044 (46)
CHEBI:15756 (45)
CHEBI:15428 (42)
CHEBI:15741 (40)
CHEBI:17268 (40)
CHEBI:28842 (39)
CHEBI:18012 (38)
CHEBI:17568 (36)
CHEBI:24898 (36)
CHEBI:26271 (36)
CHEBI:16811 (35)
CHEBI:18186 (35)
CHEBI:27266 (35)
CHEBI:27897 (35)
CHEBI:28300 (35)
CHEBI:17754 (34)
CHEBI:17822 (34)
CHEBI:17992 (34)
CHEBI:25094 (34)
CHEBI:16704 (33)
CHEBI:17351 (33)
CHEBI:22660 (33)
CHEBI:25017 (33)
CHEBI:16449 (32)
CHEBI:16958 (32)
CHEBI:17596 (32)
CHEBI:15996 (2)
CHEBI:17552 (2)
CHEBI:18367 (2)

Metabolite Name

Phenylalanine (23)
Proline (20)
Hypoxanthine (19)
Inosine (19)
Adenosine (18)
Glutamine (18)
L-Phenylalanine (18)
Sucrose (18)
Uracil (18)
Valine (18)
Citric acid (17)
Creatine (17)
Isoleucine (17)
Alanine (16)
Creatinine (16)
Glycine (16)
Leucine (16)
Methionine (16)
Taurine (16)
Uridine (16)
Cytosine (15)
Malic acid (15)
Ornithine (15)
Pantothenic acid (15)
Tryptophan (15)
Xanthine (15)
Asparagine (14)
Betaine (14)
Choline (14)
L-Leucine (14)

First Public Date

2014 (2)
2023 (1)
2020 (1)
2017 (1)

Modelling Approach

Ordinary differential equation model (18)

Lab affiliation

Centre for Proteome Research, University of Liverpool, Liverpool, UK (9)
Bioplatforms Australia (7)
DZNE Munich, Neuroproteomics, Feodor-Lynen Str. 17, 81377 Munich, Germany (5)
Biotechnology Research Center, No.2 Tiansheng Road, BeiBei District, Chongqing, 400715,P.R.China (4)
University of Alabama at Birmingham, O'Neal Mass Spectrometry Proteomics Shared Facility (4)
Department of Biology, University of Pennsylvania (3)
Head of System Biology Lab. at Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Russia (3)
Markus Ralser, Prof. Dr. Einstein Professor of Biochemistry Head, Institute of Biochemistry, Charité University Medicine, Berlin markus.ralser@charite.de Senior Group Leader, The Francis Crick Institute, London markus.ralser@crick.ac.uk (3)
Biological Sciences Division, Pacific Northwest National Laboratory (2)
Chemistry and Biochemistry Department, Montana State University, Bozeman, MT 59717 (2)
Department of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461, United States (2)
Department of Chemistry, Michigan State University, 578 S Shaw Lane, East Lansing, MI 48824, United States. (2)
Max Planck Institute for Terrestrial Microbiology Karl-von-Frisch Str. 10 35043 Marburg Germany (2)
School of Life Sciences, Tsinghua University, China (2)
Section of Paediatric Infectious Diseases, Faculty of Medicine, Imperial College London, UK (2)
Translational Research in Inflammation and Immunology Research Unit (TRIRU), Department of Mi-crobiology, Faculty of Medicine, Chulalongkorn University, 1873 Rama 4 Road, Pathumwan, Bangkok 10330, Thailand (2)
University of Modena and Reggio Emilia (2)
1 Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, University of Utrecht, Padualaan 8, 3584 CH Utrecht, The Netherlands 2 Netherlands Proteomics Center, Padualaan 8, 3584 CH Utrecht, The Netherlands (1)
1 Dept Neuroscience, Imaging and Clinical Sciences, “G. d’Annunzio” University Chieti-Pescara, Italy 2 Interuniversity Institute of Myology, Italy; lorenzo.marramiero@unich.it; es.difilippo@unich.it; tiziana@pietrangelo@unich.it; stefania.fulle@unich.it; rosa.mancinelli@unich.it 3 Functional Evaluation Laboratory, “G. d’Annunzio” University Chieti-Pescara, Italy (1)
1. Lineberger Comprehensive Cancer Center, University of North Carolina, Chapel Hill, NC, USA 2. UPMC Hillman Cancer Center, Pittsburgh, PA, USA 3. Department of Neurology, University of Pittsburgh, Pittsburgh, PA, USA 4. Department of Neurology, University of North Carolina, Chapel Hill, NC, USA (1)
1. Peripheral Neuropathy Research Group, Department of Biomedical Sciences, University of Antwerp, Antwerp, Belgium 2. Laboratory of Neuromuscular Pathology, Institute Born Bunge, Antwerp, Belgium (1)
1Laboratory of Cytometry, Nencki Institute of Experimental Biology, Polish Academy of Sciences, Warsaw, Poland (1)
2011 Collaborative Innovation Center of Tianjin for Medical Epigenetics, Tianjin Key Laboratory of Medical Epigenetics, Key Laboratory of Immune Microenvironment and Disease (Ministry of Education), Department of Biochemistry and Molecular Biology, School of Basic Medical Sciences, Tianjin Medical University, Tianjin 300070, China. (1)
2Departments of Internal Medicine, University of Michigan, Ann Arbor MI 48109, USA. (1)
Aalborg University (1)
Aging and Cardiovascular Discovery Center, Lewis Katz School of Medicine, Temple University, Philadelphia, PA 19140, USA (1)
Aix-Marseille univ, CNRS, Inserm, Institut Paoli-Calmettes, CRCM, Marseille Protéomique (1)
Assistant Professor of Neurology and Angela Dobson and Lyndon Welch Professor of Neurology Department of Neurology | University of Michigan Health System 109 Zina Pitcher Place, 5015 BSRB | Ann Arbor, MI | 48109 (1)
Associate Professor Director of Proteomics and Mass Spectrometry Facility School of Biological Sciences Nanyang Technological University 60 Nanyang Drive, Singapore 637551 Tel: (65) 6514-1006; Fax: (65) 6791-3856 Email: sksze@ntu.edu.sg Web: http://proteomics.sbs.ntu.edu.sg/ (1)
Associate Professor of Chemistry Dow Early Career Professor of Chemistry Associate Director of the Program in Chemical Biology Co-Director the Chemical Biology Interface Training Program University of Michigan 930 N University Ann Arbor, MI 48109 (1)

IsPrivate

False (18)

Model Flag

Non Kinetic (2)

Modification

15.994915 (1)
42.010565 (1)
57.021464 (1)
Not available (1)

Study type

Transcription profiling by array (99)
ChIP-seq (10)
RNA-seq of coding RNA (9)
RNA-seq of coding RNA from single cells (7)
RNA-seq of non coding RNA (7)
Unknown experiment type (3)
Comparative genomic hybridization by array (3)
MicroRNA profiling by array (3)
ChIP-chip by tiling array (2)
Other (2)
Animal - Single-cell sequencing (1)
Methylation profiling by array (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2023 (907)
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2000 (3)
1998 (2)
2002 (1)
2001 (1)

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Sex comb on midleg (Scm) is a functional link between PcG repressive complexes in Drosophila

We profiled Sex comb on midleg (Scm), Pc and E(z) in fly embryos and S2 based on BioTAP-XL ChIP-seq. ChIP-seq revealed that Scm is co-localized with PRC1, PRC2, and H3K27me3 in both S2 cells and embryos. Genomic binding/occupancy profiling of Scm, Pc and E(z) by high throughput sequencing

ORGANISM(S): Drosophila melanogaster

2015-07-09 | E-GEOD-66183 | biostudies-arrayexpress

Genome-wide analysis of gene expression response to MI-2 and z-VRPR-fmk in ABC-DLBCL cell lines

MALT1 Small Molecule Inhibitors Specifically Suppress ABC-DLBCL In Vitro and In Vivo Total RNA was obtained from HBL-1 and TMD8 cell lines subjected to 8 hours treatment with MI-2, z-VRPR-fmk or vehicle.

ORGANISM(S): Homo sapiens

2012-12-11 | E-GEOD-40003 | biostudies-arrayexpress

Incorporation of CC steps into Z-DNA: interplay between B-Z junction and Z-DNA helical formation.

Not available

S-EPMC3676945 | biostudies-literature

Homo sapiens

Genome-wide analysis of gene expression response to MI-2 and z-VRPR-fmk in ABC-DLBCL cell lines

PRJNA172299 | ENA

Z-score growth reference data for Saudi preschool children.

Not available

S-EPMC6148975 | biostudies-literature

Synthesis of 2,6-trans-disubstituted 5,6-dihydropyrans from (Z)-1,5-syn-endiols.