Mite - OmicsDI

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Unknown (2622)
Genomics (696)
Transcriptomics (289)
Proteomics (54)
Methylation profiling (7)
Other (6)
Metabolomics (5)

Organisms

Mus musculus (149)
Homo sapiens (69)
Tetranychus urticae (38)
Apis mellifera (9)
Solanum lycopersicum (9)
Arabidopsis thaliana (8)
Panonychus citri (5)
Ovis aries (4)
Tetranychus cinnabarinus (4)
Zea mays (4)
Triticum aestivum (3)
Oryza sativa (3)
Oryza sativa Japonica Group (3)
Canis lupus familiaris (3)
Dermatophagoides pteronyssinus (3)
Bos taurus (2)
Orientia tsutsugamushi (2)
Hordeum vulgare (2)
Drosophila melanogaster (2)
Caenorhabditis briggsae (2)
Caenorhabditis elegans (2)
Litomosoides sigmodontis (1)
Rickettsia conorii (1)
Rhipicephalus microplus (1)
Deformed wing virus (1)
Musca domestica (1)
Hordeum vulgare subsp. vulgare (1)
Sus scrofa (1)
Phaseolus lunatus (1)
Citrus unshiu x Citrus sinensis (1)

Organisms

Mus musculus (129)
Homo sapiens (47)
Tetranychus urticae (45)
Varroa destructor (9)
Tetranychus cinnabarinus (8)
mite metagenome (7)
Apis mellifera (7)
Dermatophagoides pteronyssinus (6)
Panonychus citri (6)
Solanum lycopersicum (6)
Rhizoglyphus robini (5)
Orientia tsutsugamushi (4)
Dermanyssus gallinae (4)
Arabidopsis thaliana (4)
Polyphagotarsonemus latus (3)
Sarcoptes scabiei (3)
Stutzerimonas chloritidismutans (3)
Zea mays (3)
Wolbachia endosymbiont of Tetranychus urticae (2)
Fragariocoptes setiger (2)
Neoseiulus cucumeris (2)
Neoseiulus californicus (2)
Leptotrombidium pallidum (2)
Aculops lycopersici (2)
Carpoglyphus lactis (2)
Tetranychidae (2)
Deformed wing virus (2)
Caenorhabditis briggsae (2)
Tetranychus kanzawai (2)
Phytoseiulus persimilis (2)

Repository

ENA (669)
geo (223)
biostudies-arrayexpress (105)
pride (27)
iProX (8)
jPOST (7)
MassIVE (7)
MetaboLights (5)
ExpressionAtlas (3)
PAXDB (2)
EGA (1)
PanoramaPublic (1)

Tissue

Whole body (4)
Head (3)
Leaf (3)
Saliva (3)
Abdomen (2)
Hemolymph (2)
Plant cell (2)
Bronchoalveolar lavage (1)
Cell culture (1)
Egg (1)
Epithelial cell (1)
Excretion (1)
Fat body (1)
Lung (1)
Protein secretion (1)
Shoot meristem (1)

Disease

Asthma (2)
Multibacillary (1)
Non-infected (1)
Psoroptes ovis infestation (1)
Allergic asthma (1)
Parasitic infectious disease (1)
Scabies (1)

Technology Type

Mass Spectrometry (27)
Shotgun proteomics (14)
Data-dependent acquisition (6)
Bottom-up proteomics (5)
Mass spectrometry (3)
HDMSE (2)
Top-down proteomics (2)
450K (1)
NMR spectroscopy (1)
Mass spectrometry assay (1)
Affinity purification coupled with mass spectrometry proteomics (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Gel-based experiment (1)
MSE (1)

Instrument Platform

Illumina HiSeq 2000 (6)
Illumina NovaSeq 6000 (5)
Orbitrap Fusion (5)
NextSeq 500 (4)
Cellranger (1)
FACS BD Aria II & III (1)
Agilent 2100 Bioanalyzer. (1)
RNeasy mini kit (1)
MagNA lyser (1)
Element AVITI (1)
10X Chromium (1)
DNBSEQ-G400 (1)
Illumina HiSeq 1000 (1)
NextSeq 550 (1)
Illumina HiSeq 2500 (1)
Illumina HiSeq 4000 (1)
Q Exactive (1)
TripleTOF 5600 (1)
Capillary electrophoresis MS - positive (1)
Xevo G2 QTOF (Waters) (1)
Nuclear Magnetic Resonance (NMR) - (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Liquid Chromatography MS - negative - reverse-phase (1)
Liquid Chromatography MS - positive - hilic (1)
Liquid Chromatography MS - positive - reverse phase (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2025 (44)
2026 (30)
2019 (27)
2024 (25)
2023 (25)
2015 (24)
2021 (22)
2013 (22)
2020 (21)
2022 (20)
2018 (19)
2014 (18)
2017 (17)
2016 (16)
2011 (16)
2012 (15)
2009 (9)
2010 (8)
2008 (6)
2007 (3)

UNIPROT ID/AC

14331_ORYSJ (1)
14332_ORYSJ (1)
14333_ORYSJ (1)
14334_ORYSJ (1)
14335_ORYSJ (1)
14336_ORYSJ (1)
14337_ORYSJ (1)
40C1_ORYSJ (1)
40G2_ORYSJ (1)
65489.OBART01G05830.1 (1)
65489.OBART01G12280.1 (1)
65489.OBART01G35120.1 (1)
65489.OBART03G02780.1 (1)
65489.OBART04G08210.1 (1)
65489.OBART04G23010.1 (1)
65489.OBART04G25560.1 (1)
65489.OBART05G19430.1 (1)
65489.OBART06G24180.1 (1)
65489.OBART06G26430.1 (1)
65489.OBART07G18050.1 (1)
65489.OBART08G10770.1 (1)
65489.OBART09G18960.1 (1)
65489.OBART09G20080.1 (1)
65489.OBART10G12670.1 (1)
65489.OBART11G11440.1 (1)
6PGD1_ORYSJ (1)
6PGD2_ORYSJ (1)
6PGL3_ORYSJ (1)
6PGL4_ORYSJ (1)
A0A0D3EIN4_9ORYZ (1)

CHEBI ID

CHEBI:15891 (3)
CHEBI:17895 (3)
CHEBI:80713 (2)
CHEBI:28229 (2)
CHEBI:35012 (2)
CHEBI:16279 (2)
CHEBI:27631 (2)
CHEBI:28595 (2)
CHEBI:28254 (2)
CHEBI:74795 (2)
CHEBI:9347 (2)
CHEBI:28931 (2)
CHEBI:15765 (2)
CHEBI:17660 (2)
CHEBI:17287 (2)
CHEBI:17858 (2)
CHEBI:36313 (2)
CHEBI:16040 (2)
CHEBI:37084 (2)
CHEBI:17802 (2)
CHEBI:16977 (2)
CHEBI:17929 (2)
CHEBI:17780 (2)
CHEBI:18086 (2)
CHEBI:7916 (2)
CHEBI:18019 (2)
CHEBI:18050 (2)
CHEBI:16857 (2)
CHEBI:16414 (2)
CHEBI:27897 (2)

Metabolite Name

Thiodiacetic acid (2)
Indole-3-acetaldehyde (2)
Valine (2)
5-Hydroxy-L-tryptophan (2)
Pantothenate (2)
Taurine (2)
Cytosine (2)
Glycerophosphocholine (2)
Tetracosenoyl-CoA (1)
Alpha-D-Galactosyl-diphosphoundecaprenol (1)
Alpha-D-Mannosylchitobiosyldiphosphodolichol (1)
(6Z,9Z,12Z,15Z,18Z)-Tetracosapentaenoyl-CoA (1)
Docosenoyl-CoA (1)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysyl-D-alanine (1)
3-Oxostearoyl-CoA (1)
Icosenoyl-CoA (1)
Gitonin (1)
OPC6-CoA (1)
Alpha-Galactosyl-(1-6)-alpha-galactosyl-(1-6)-alpha-galactosyl-(1-6)-alpha-galactosyl-(1-6)-alpha-glucosyl-(1-2)-beta-fructose (1)
Zn-Bacteriochlorophyll a (1)
Hentriacontan-1-ol (1)
LDS-751 (1)
Fluoroacetyl-CoA (1)
Obtusol (1)
Octachlorocamphene (1)
Alphazurine FG (1)
Patellamide D (1)
3alpha,12alpha-Dihydroxy-7-oxo-5beta-cholanate (1)
Long-chain acyl-CoA (1)
Disophenol (1)

First Public Date

2025 (98)
2024 (83)
2026 (80)
2023 (66)
2022 (60)
2020 (47)
2019 (45)
2021 (42)
2014 (32)
2013 (30)
2017 (26)
2018 (23)
2015 (22)
2016 (14)
2011 (1)

Classification

bacteria (8)
viruses (2)

Study type

Transcription profiling by array (58)
RNA-seq of coding RNA (24)
RNA-seq of non coding RNA (10)
RNA-seq of coding RNA from single cells (5)
Unknown experiment type (1)
Human - Single-cell sequencing (1)
Plant - High-throughput sequencing (1)
Transcription profiling by RT-PCR (1)
Methylation profiling by array (1)
Proteomic profiling by array (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2021 (274)
2022 (272)
2023 (257)
2025 (243)
2020 (206)
2024 (203)
2018 (190)
2019 (183)
2016 (149)
2017 (148)
2015 (137)
2014 (106)
2013 (92)
2012 (58)
2011 (56)
2010 (37)
2026 (35)
2009 (24)
2008 (21)
2007 (11)
2005 (6)
2001 (5)
2000 (5)
2006 (3)
2004 (2)
2003 (1)
1999 (1)
1998 (1)
1997 (1)

Lab affiliation

1 SaBio, Instituto de Investigación en Recursos Cinegéticos (IREC), Consejo Superior de Investigaciones Científicas (CSIC), Universidad de Castilla-La Mancha (UCLM)-Junta de Comunidades de Castilla-La Mancha (JCCM), Ronda de Toledo 12, 13005 Ciudad Real, Spain (1)
1Institute of Plant Protection, Agricultural Research Organization, The Volcani Center, Rishon LeZion, Israel (1)
Associate Professor Dept. of Pathology and Laboratory Medicine HSRF 218, University of Vermont Larner College of Medicine Burlington, Vermont, 05405, USA (1)
BioBix, Lab for Bioinformatics and Computational Genomics, Ghent University, Belgium (1)
Biological Sciences and Health Center, University of Taquari Valley - Univates, Lajeado, RS, Brazil (1)
Biology Department, University of Firenze. Italy. (1)
CR, University Grenoble Alpes, IAB Inserm 1209, CNRS UMR5309, 38000 Grenoble, France. Plateforme BioPark d'Archamps, 74160 Archamps, France. (1)
Chair in Infection and Global Health, Department of Infection Biology, Institute of Infection and Global Health, University of Liverpool, ic2 Building, Liverpool, L3 5RF, UK. (1)
Core Unit Proteomics, Berlin Institute of Health at Charite- Universitaetsmedizin Berlin and Max Delbrueck Center for Molecular Medicine (MDC), 13125 Berlin, Germany (1)
Department of Biology, Maynooth University, Maynooth, Co. Kildare, Ireland. (1)
Department of Biosciences, University of Salzburg, Salzburg, Austria (1)
Department of Chemistry, University of California, Riverside, CA 92502, USA (1)
Department of Crop Protection Faculty of Bioscience Engineering Ghent University Coupure Links 653, 9000 Ghent, Belgium (1)
Department of Entomology, Nanjing Agricultural University, Nanjing, Jiangsu 210095, China (1)
Department of Experimental Biology, Faculty of Science, Masaryk University, Brno, Czech Republic (1)
Department of Infection Biology, Institute of Infection and Global Health, University of Liverpool, UK (1)
Faculty of Veterinary and Agricultural Sciences, The University of Melbourne, Australia (1)
Faculty of Veterinary and Agricultural Sciences, The University of Melbourne, Parkville, Victoria, Australia (1)
Institute of Apicultural Research, Chinese Academy of Agricultural Sciences (1)
Key Laboratory of Entomology and Pest Control Engineering, College of Plant Protection, Southwest University, Chongqing 400716, China (1)
Lab Head, Medical Mycology Lab (1)
Laboratory of Applied Biology St Aloysius College (Autonomous) Mangalore 575003, INDIA (1)
Plateforme BioPark Archamps (1)
SaBio, Instituto de Investigación en Recursos Cinegéticos (IREC), Consejo Superior de Investigaciones Científicas (CSIC), Universidad de Castilla-La Mancha (UCLM)-Junta de Comunidades de Castilla-La Mancha (JCCM), Ronda de Toledo 12, 13005 Ciudad Real, Spain (1)
SaBio, Instituto de Investigación en Recursos Cinegéticos (IREC), Consejo Superior de Investigaciones Científicas (CSIC), Universidad de Castilla-La Mancha (UCLM)-Junta de Comunidades de Castilla-La Mancha (JCCM), Ronda de Toledo 12, 13005 Ciudad Real, Spain. (1)
Universidade Federal de Pelotas (UFPel), Programa de Pós-Graduação em Fisiologia Vegetal (PPGFV), Prédio 14, Sala 305, Bairro Campus Universitário, Capão do Leão, RS - CEP: 96.160-000 (1)
nstitute of Plant Protection, Agricultural Research Organization, The Volcani Center, Rishon LeZion, Israel (1)

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Brain metabolomic profiling of eastern honey bee (Apis cerana) infested with the mite Varroa destructor

The mite Varroa destructor is currently the greatest threat to apiculture as it is causing a global decrease in honey bee colonies. However, it rarely causes serious damage to its native hosts, the eastern honey bees Apis cerana. To better understand the mechanism of resistance of A. cerana against ...

2017-10-27 | MTBLS379 | MetaboLights

Developmental stage-specific small RNA composition in the two-spotted spider mite (Tetranychus urticae)

We generated 38-bp Illumina reads from single messenger RNA libraries from three diverse developmental stages of the two-spotted spider mite to capture small RNA diversity across development. Adult, nymphal+larvae and embryonic stages were separated using sieves of various pore sizes, and mites of v...

ORGANISM(S): Tetranychus urticae

2011-11-23 | E-GEOD-32005 | biostudies-arrayexpress

Spider mite preliminary feeding experiment with mites reared on bean and two Arabidopsis thaliana accessions

We sequenced messenger RNA from mixed stages of the two-spotted spider mite (Tetranychus urticae) reared on bean (Phaseolus vulgaris cv California Red Kidney; the laboratory host plant for mites) and two Arabidopsis thaliana accessions which were considered to either be susceptible (Kondara) or resi...

ORGANISM(S): Tetranychus urticae

2011-11-23 | E-GEOD-31525 | biostudies-arrayexpress

Developmental stage-specific gene expression in the two-spotted spider mite (Tetranychus urticae)

We generated 77-bp Illumina reads from single messenger RNA libraries from four diverse developmental stages of the two-spotted spider mite to maximally capture the complement of transcribed sequences across development. Adult, nymphal, larvae and embryonic stages were separated using sieves of vari...

ORGANISM(S): Tetranychus urticae

2011-11-23 | E-GEOD-31527 | biostudies-arrayexpress

The genome of Tetranychus urticae reveals herbivorous pest adaptations

This SuperSeries is composed of the following subset Series: GSE31525: Spider mite preliminary feeding experiment with mites reared on bean and two Arabidopsis thaliana accessions GSE31527: Developmental stage-specific gene expression in the two-spotted spider mite (Tetranychus urticae) GSE32005: De...

ORGANISM(S): Tetranychus urticae

2011-11-23 | E-GEOD-32342 | biostudies-arrayexpress

Host plant shift and acaricide resistance effects on gene expression in the two-spotted spider mite, T. urticae

The goal of our microarray experiments was twofold: 1) Compare the gene expression profile of acaricide resistant spider mite strains (MAR-AB and MR-VP) with that of a susceptible spider mite strain (London); 2) Study gene expression changes in spider mites from the London strain upon transfer from ...

ORGANISM(S): Tetranychus urticae

2012-12-04 | E-GEOD-39869 | biostudies-arrayexpress

Effect of Deformed wing virus (DWV) and Varroa destructor (mite) on gene expression in honeybee (Apis mellifra) pupae

Experiment was designed to study the effect of Deformed wing virus (DWV) and the mite Varroa destructor on global gene expression using microarray transcriptional profiling in developing worker honeybee (Apis mellifera). Newly hatched bee larvae (day 3 of bee development) were transferred from a Var...

ORGANISM(S): Apis mellifera

2013-06-01 | E-MTAB-1285 | biostudies-arrayexpress

Effects of Deformed wing virus infection and the mite Varroa destructor on siRNA and miRNA composition in the honeybee (Apis mellifera)

Experiment was designed to study the effect of Deformed wing virus (DWV) and the mite Varroa destructor on on siRNA and miRNA composition using high-throughput sequencing of small RNA in developing worker honeybee (Apis mellifera). Newly hatched bee larvae (day 3 of bee development) were transferre...

ORGANISM(S): Apis mellifera

2013-09-01 | E-MTAB-1671 | biostudies-arrayexpress

Digital gene expression analysis reveals genes associated with hexythiazox resistance in citrus red mite, Panonychus citri

We compared a miticides resistant strain and a susceptible strain's gene expression profile to reveal genes associated with miticide resistance in Panonychus citri.

ORGANISM(S): Panonychus citri

2013-06-11 | E-MTAB-1193 | biostudies-arrayexpress

Spirodiclofen resistance in the spider mite Tetranychus urticae

The goal of our microarray experiments was to compare the gene expression profile of two spirodiclofen resistant spider mite strains (SR-VP and SR-TK) with that of a susceptible spider mite strain (LS-VL) 5 samples were analyzed: 3 biological replicates for SR-VP, 2 biological replicates for SR-TK

ORGANISM(S): Tetranychus urticae

2013-06-26 | E-GEOD-43538 | biostudies-arrayexpress

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