Mitochondrial unfolded protein response

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Unknown (650)
Transcriptomics (152)
Genomics (139)
Proteomics (49)
Other (3)
Metabolomics (3)

Organisms

Homo sapiens (59)
Mus musculus (49)
Schizophyllum commune H4-8 (44)
Mycobacterium tuberculosis SP7 (44)
Oryza sativa Japonica Group (44)
Crotalus durissus terrificus (44)
Eriocheir sinensis (44)
Candidatus Endoriftia persephonae (44)
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Mycobacterium tuberculosis SP22 (44)
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Lama (44)
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Enterococcus mundtii CRL35 (44)
Pongo pygmaeus (44)
Oncorhynchus tshawytscha (44)
Pseudomonas canadensis (44)
Caenorhabditis elegans (37)
Arabidopsis thaliana (5)
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Danio rerio (2)
Drosophila melanogaster (2)
Neurospora crassa OR74A (1)
Acropora palmata (1)
Mytilus edulis (1)
Sparus aurata (1)

Organisms

Homo sapiens (47)
Caenorhabditis elegans (31)
Mus musculus (30)
Cryptococcus neoformans H99 (2)
Arabidopsis thaliana (2)
Danio rerio (2)
Rattus norvegicus (2)
Drosophila melanogaster (2)
Sparus aurata (1)
Saccharomyces cerevisiae (1)

Repository

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pride (44)
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Tissue

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Disease

Cervix carcinoma (2)
Brain cancer (2)
Disease free (2)
Severe acute respiratory syndrome coronavirus 2 (1)
Allergic asthma (1)
Coronavirus infectious disease (1)
Type 1 diabetes mellitus (1)
Neurodegenerative disease (1)
COVID-19 (1)
Type 2 diabetes mellitus (1)
Acute leukemia (1)

Technology Type

Mass Spectrometry (44)
Shotgun proteomics (17)
Bottom-up proteomics (11)
Data-independent acquisition (8)
Data-dependent acquisition (5)
Affinity purification coupled with mass spectrometry proteomics (5)
SWATH MS (3)
Mass spectrometry (2)
Gel-based experiment (2)
Mass spectrometry assay (1)
SRM/MRM (1)
Top-down proteomics (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)

Instrument Platform

Illumina NovaSeq 6000 (3)
Q Exactive (2)
MagNA Lyser (1)
Ion Torrent Proton (1)
Illumina MiSeq (1)
Illumina HiSeq 2000 (1)
NextSeq 500 (1)
Liquid Chromatography MS - alternating - hilic (1)
Gas Chromatography MS - (1)

Publication Date

2026 (39)
2025 (31)
2024 (23)
2020 (17)
2016 (14)
2022 (13)
2021 (11)
2019 (11)
2017 (10)
2015 (9)
2023 (9)
2014 (7)
2018 (6)
2010 (5)
2013 (3)
2009 (2)
2008 (2)
2012 (1)

CHEBI ID

CHEBI:22605 (2)
CHEBI:37654 (2)
CHEBI:27226 (2)
CHEBI:13389 (2)
CHEBI:17568 (2)
CHEBI:15940 (2)
CHEBI:17148 (2)
CHEBI:4170 (2)
CHEBI:15741 (2)
CHEBI:32816 (2)
CHEBI:16908 (2)
CHEBI:18012 (2)
CHEBI:30769 (2)
CHEBI:30915 (2)
CHEBI:60784 (1)
CHEBI:140004 (1)
CHEBI:57345 (1)
CHEBI:16155 (1)
CHEBI:62501 (1)
CHEBI:15375 (1)
CHEBI:47191 (1)
CHEBI:23858 (1)
CHEBI:136286 (1)
CHEBI:76614 (1)
CHEBI:57987 (1)
CHEBI:50321 (1)
CHEBI:58083 (1)
CHEBI:133090 (1)
CHEBI:63131 (1)
CHEBI:35850 (1)

Metabolite Name

Tricosenoate (23:1) (1)
Sphingomyelin (d18:2/14:0, d18:1/14:1)* (1)
Sphingomyelin (d18:1/15:0, d16:1/17:0)* (1)
S-nitrosoglutathione (GSNO) (1)
Mesaconate (methylfumarate) (1)
Isovaleryl CoA (1)
Isobar: fructose 1,6-diphosphate, glucose 1,6-diphosphate, myo-inositol 1,4 or 1,3-diphosphate (1)
Diadenosine triphosphate (1)
Behenate (22:0)* (1)
7-hydroxycholesterol (alpha or beta) (1)
1-stearoyl-GPG (18:0) (1)
1-stearoyl-2-oleoyl-GPI (18:0/18:1)* (1)
1-palmitoyl-3-linoleoyl-glycerol (16:0/18:2)* (1)
1-palmitoyl-2-alpha-linolenoyl-GPC (16:0/18:3n3)* (1)
1-palmitoleoyl-3-oleoyl-glycerol (16:1/18:1)* (1)
1-palmitoleoyl-2-oleoyl-GPC (16:1/18:1)* (1)
1-palmitoleoyl-2-oleoyl-glycerol (16:1/18:1)* (1)
1-oleoyl-3-linoleoyl-glycerol (18:1/18:2) (1)
1-margaroylglycerol (17:0) (1)
1,2-dioleoyl-GPS (18:1/18:1) (1)
1,2-dioleoyl-GPI (18:1/18:1) (1)
1,2-dioleoyl-GPC (18:1/18:1)* (1)
UDP-N-acetylgalactosamine (1)
Glucuronate 1-phosphate* (1)
Uridine 3'-monophosphate (3'-UMP) (1)
Cytidine 3'-monophosphate (3'-CMP) (1)
Lactosyl-N-palmitoyl-sphingosine (1)
Glutarate (pentanedioate) (1)
1-pentadecanoylglycerol (15:0) (1)
1-methylimidazoleacetate (1)

First Public Date

2026 (28)
2024 (21)
2025 (17)
2020 (13)
2022 (9)
2021 (8)
2017 (8)
2023 (7)
2019 (7)
2016 (5)
2014 (4)
2018 (3)
2015 (3)

Classification

fungi (2)

Modification

-18.010565 (1)
-17.026549 (1)
42.010565 (1)
15.994915 (1)
57.021464 (1)

Study type

Transcription profiling by array (21)
RNA-seq of coding RNA (12)
Unknown experiment type (1)
Other (1)

Release Date

2025 (75)
2022 (72)
2023 (71)
2024 (67)
2021 (65)
2020 (57)
2016 (51)
2019 (51)
2018 (32)
2015 (32)
2017 (31)
2014 (29)
2012 (13)
2013 (10)
2026 (8)
2010 (6)
2011 (5)
2009 (4)
2008 (3)
2007 (1)
2003 (1)

Lab affiliation

Max-Planck-Institute for Biology of Ageing Department of Mitochondrial Proteostasis Joseph-Stelzmann-Str. 9b 50931 Cologne (3)
Max-Planck-Institute for Biology of Ageing Department of Mitochondrial Proteostasis Joseph-Stelzmann-Str. 9b 50931 Cologne, Germany (2)
Core Facility for Mass Spectrometry and Proteomics, Center for Molecular Biology of Heidelberg University (ZMBH), DKFZ-ZMBH Alliance, 69120 Heidelberg, Germany (2)
Max-Planck-Institute for Biology of Ageing Department of Mitochondrial Proteostasis Joseph-Stelzmann-Str. 9b 50931 Cologne Germany (2)
Institute of Biochemistry II Goethe University Frankfurt – Medical School University Hospital Germany (2)
Leibniz Institute for Aging - Fritz-Lipmann-Institut (FLI) Beutenbergstraße 11 07745 Jena (1)
Department of Mitochondrial Proteostasis Joseph-Stelzmann-Str. 9b 50931 Cologne (1)
Department of Biomedicine, Aarhus University, Aarhus, Denmark STENO Diabetes Center Aarhus, Aarhus, Denmark (1)
Departments of Biology and Chemistry, Vanderbilt University, USA (1)
Max-Planck-Institute for Biology of Ageing Department of Mitochondrial Proteostasis Joseph-Stelzmann-Str. 9b 50931 Cologne (1)
TU Munich, Department of Chemistry Lichtenbergstr. 4 Garching, DE 85747 (1)
PBLA, Salk Institute, La Jolla, CA, USA (1)
Federal Research Institute for Animal Health Germany (1)
Institute of Healthy Ageing, UCL Department of Genetics, Evolution and Environment, London, WC1E 6BT (1)
Department of Biochemistry and Functional Proteomics, Faculty of Biology and BIOSS Centre for Biological Signalling Studies, University of Freiburg, 79104 Freiburg, Germany (1)
Lipidomics Group Leibniz-Institute for analytical science – ISAS – e.V. Otto-Hahn-Straße 6b 44227 Dortmund, Germany (1)
Department of Biochemistry and Pharmacology, Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Melbourne, VIC, 3010, Australia 2Murdoch Children’s Research Institute, Melbourne, VIC 3052, Australia 3Victorian Clinical Genetics Services, Murdoch Children’s Research Institute, Melbourne, VIC, 3052, Australia (1)
CSIR-CCMB (1)
IMSB, ETH Zurich, Switzerland (1)
UMR 1297-I2MC, Inserm, Université de Toulouse, UPS , 31000Toulouse, France (1)
National Center for Advancing Translational Sciences, National Institutes of Health (1)
State Key Laboratory of Proteomics, National Center for Protein Sciences Beijing, Beijing Proteome Research Center (1)
Heart Institute, Cedars-Sinai Medical Center (1)
Institut für experimentelle Medizin Systematische Proteomics & Bioanalytik Niemannsweg 11 24105 Kiel (1)
Department of Pathophysiology, Key Laboratory of Cell Differentiation and Apoptosis of Chinese Ministry of Education, Shanghai Jiao Tong University School of Medicine (1)
Northeastern University (1)
Associate Professor Dept. of Pathology and Laboratory Medicine HSRF 218, University of Vermont Larner College of Medicine Burlington, Vermont, 05405, USA (1)
Key Laboratory of Molecular Epigenetics of the Ministry of Education, Northeast Normal University, China; (1)
Department Langer - Mitochondrial Proteostasis Max-Planck Institut für Altersforschung Joseph-Stelzmann Str 9b 50931 Cologne, Germany (1)
Rothamsted Research, Harpenden, AL5 2JQ, UK (1)

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Ribosomal mistranslation leads to silencing of the unfolded protein response and increased mitochondrial biogenesis

Translation fidelity is the limiting factor in the accuracy of gene expression. With an estimated frequency of 10-4, errors in mRNA decoding occur in a mostly stochastic manner. Little is known about the response of higher eukaryotes to chronic loss of ribosomal accuracy as per an increase in the...

2019-09-17 | MTBLS106 | MetaboLights

Mitochondrial unfolded protein response controls matrix pre-RNA processing and translation

The mitochondrial matrix is unique in that it must integrate folding and assembly of proteins derived from nuclear and mitochondrial genomes. In C. elegans, the mitochondrial unfolded protein response (UPRmt) senses matrix protein misfolding and induces a program of nuclear gene expression, includin...

ORGANISM(S): Homo sapiens

2016-06-28 | E-GEOD-75247 | biostudies-arrayexpress

Mitochondrial unfolded protein response controls matrix pre-RNA processing and translation

ORGANISM(S): Homo sapiens

2016-06-28 | E-GEOD-75410 | biostudies-arrayexpress

Mitochondrial aconitase inhibits immunity via reducing mitochondrial unfolded protein response

PRJNA752433 | ENA

Compartment specific mitochondrial unfolded protein response

PRJNA1395659 | ENA

mRNA-seq of worms and the mitochondrial unfolded protein response (UPRmt)

PRJNA591855 | ENA

Oxidative stress induces mitochondrial dysfunction and a protective unfolded protein response in RPE cells

How retinal pigmented epithelial (RPE) cells degenerate from oxidative stress in age-related macular degeneration (AMD) is incompletely understood. The study's intent was to identify key cytoprotective pathways activated by oxidative stress, and to determine the extent of their protection. Immunohis...

ORGANISM(S): Homo sapiens

2014-01-30 | E-GEOD-49107 | biostudies-arrayexpress

CREBH Regulates Mitochondrial Unfolded Protein Response to Maintain Energy Homeostasis

PRJNA1184793 | ENA

Mitochondrial unfolded protein response controls matrix pre-RNA processing and translation

This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

ORGANISM(S): Homo sapiens

2016-06-28 | E-GEOD-75411 | biostudies-arrayexpress

Expression data from mitochondrial protease ClpP knock-out mice.

The peptidase ClpP is conserved from bacteria to human. In the mitochondrial matrix, it multimerizes and forms a macromolecular proteasome-like cylinder. Because of its known relevance for the mitochondrial unfolded protein response during cell stress, we characterized two ClpP knock-out mouse found...

ORGANISM(S): Mus musculus

2013-07-17 | E-GEOD-40207 | biostudies-arrayexpress

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996 Results

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