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TranscriptomicsTranscription profiling of Arabidiopsis with NST1 over-expression vs wild type
In plants, secondary wall thickenings play important roles in various biological processes, although the factors regulating these processes remain to be characterized. We show that expression of chimeric repressors derived from NAC SECONDARY WALL THICKENINGS PROMOTING FACTOR1 (NST1) and NST2 in Arab...
ORGANISM(S): Arabidopsis thaliana 
2008-06-12 | E-GEOD-3363 | biostudies-arrayexpress
TranscriptomicsFinding direct target genes of VND7
Direct target genes of VND7 were explored with inducible expression system using glucocorticoid receptor (GR). Transgenic plants expressing 35S:VND7-VP16-GR were treated with dexamethazone (DEX) and/or protein synthesis inhibitor cycloheximide (CHX). A number of genes related to the formation of vas...
ORGANISM(S): Arabidopsis thaliana 
2011-03-31 | E-GEOD-24169 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis nst1-1 nst3-1 mutants
Wood is one of the most important and enormous biomass that is widely used in our life. It is formed by successive addition of secondary xylem that develops continuously from cambium. The transcriptome of nst1 nst3 “double-knockout” lines was examined to know the effect of mutations on wood form...
ORGANISM(S): Arabidopsis thaliana 
2008-06-13 | E-GEOD-5187 | biostudies-arrayexpress
TranscriptomicsFunctional analysis of Arabidopsis MYB106 and WIN1/SHN1 transcription factors
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Arabidopsis thaliana 
2013-09-23 | E-GEOD-31887 | biostudies-arrayexpress
TranscriptomicsTranscriptomes of 35S:MYB106SRDX, 35S:WIN1SRDX and wild-type Arabidopsis seedling
Antirrhinum R2R3 MYB transcription factor MIXTA is known to regulate epidermal cell outgrowth in petal. Arabidopsis has three MIXTA-like proteins NOECK(NOK)/MYB106, MYB16 and MYB17 and nok mutant exhibits over-branched trichomes in rosette leaves. On the other hand, Arabidopsis AP2/ERF transcription...
ORGANISM(S): Arabidopsis thaliana 
2013-09-23 | E-GEOD-31884 | biostudies-arrayexpress
TranscriptomicsTranscriptomes of 35S:WIN1 and vector-control Arabidopsis seedling
Antirrhinum R2R3 MYB transcription factor MIXTA is known to regulate epidermal cell outgrowth in petal. Arabidopsis has three MIXTA-like proteins NOECK(NOK)/MYB106, MYB16 and MYB17 and nok mutant exhibits over-branched trichomes in rosette leaves. On the other hand, Arabidopsis AP2/ERF transcription...
ORGANISM(S): Arabidopsis thaliana 
2013-09-23 | E-GEOD-31885 | biostudies-arrayexpress
TranscriptomicsTranscriptomes of 35S:MYB106VP16 and wild-type Arabidopsis seedling
Antirrhinum R2R3 MYB transcription factor MIXTA is known to regulate epidermal cell outgrowth in petal. Arabidopsis has three MIXTA-like proteins NOECK(NOK)/MYB106, MYB16 and MYB17 and nok mutant exhibits over-branched trichomes in rosette leaves. On the other hand, Arabidopsis AP2/ERF transcription...
ORGANISM(S): Arabidopsis thaliana 
2013-09-23 | E-GEOD-31886 | biostudies-arrayexpress
TranscriptomicsComparison of Arabidopsis callus
Arabidopsis thaliana plant expressing 35S:WIND1 shows callus-like morphology without hormone treatment. Transcriptomes of the callus-like cell expressing 35S:WIND1, callus of T87 cultured cell, 2,4-D-induced callus and control seedling plant were compared by Agilent microarray. Comparison of four ki...
ORGANISM(S): Arabidopsis thaliana 
2011-05-17 | E-GEOD-21631 | biostudies-arrayexpress
TranscriptomicsA gene regulatory network involving the class II ERF transcriptional repressors in leaf senescence of Arabidopsis thaliana
Leaf senescence is the final developmental process that includes the mobilization of nutrients from old leaves to newly growing tissues. The progression of leaf senescence requires dynamic but coordinated changes of gene expression. Although several transcription factors (TFs) are known to be involv...
ORGANISM(S): Arabidopsis thaliana 
2013-07-02 | E-GEOD-41053 | biostudies-arrayexpress
TranscriptomicsJA-INDUCIBLE MYC2-LIKE1 acts as a repressor and negatively regulates jasmonate signaling in Arabidopsis
Jasmonate (JA) is a plant hormone that controls trade-offs between plant growth and responses to biotic and abiotic stresses. Although recent studies uncover core mechanism for JA-induced responses in Arabidopsis thaliana, it remains elusive how plants attenuate those responses. We report here that ...
ORGANISM(S): Arabidopsis thaliana 
2013-07-03 | E-GEOD-42552 | biostudies-arrayexpress
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