Mme - OmicsDI

Show results for

Unknown (649)
Transcriptomics (161)
Genomics (63)
Proteomics (30)
Models (3)
Other (2)
Methylation profiling (1)
Metabolomics (1)

Organisms

Homo sapiens (123)
Mus musculus (34)
Allexis (15)
Arabidopsis thaliana (15)
Rattus norvegicus (6)
Gossypium hirsutum (2)
Heliconius melpomene (2)
Glycine max (2)
Caenorhabditis elegans (2)
Phalaenopsis aphrodite subsp. formosana (2)
Spodoptera frugiperda (2)
Holotrichia serrata (2)
Populus cathayana (1)
Populus yunnanensis (1)
Heliconius melpomene melpomene (1)
Ipomoea batatas (1)
Mus musculus domesticus (1)
Oryza sativa Indica Group (1)
Zea mays (1)
Schizosaccharomyces pombe (1)
Nicotiana tabacum (1)
Hordeum vulgare (1)
Crocodylus moreletii (1)
Pseudomonas putida KT2440 (1)
Sus scrofa domesticus (1)
Haloferax volcanii DS2 (1)
Heterorhabditis (1)
Photorhabdus luminescens (1)
Steinernema feltiae (1)
Stillingia lineata (1)

Organisms

Mus musculus (10)
Klebsiella pneumoniae (8)
Homo sapiens (7)
Vipera ursinii (4)
Rattus norvegicus (2)
Roseovarius faecimaris (1)
Phalaenopsis aphrodite subsp. formosana (1)
Crocodylus moreletii (1)
Paenirhodobacter sp. MME-103 (1)
Pseudomonas putida KT2440 (1)

Repository

biostudies-arrayexpress (149)
ENA (46)
geo (23)
pride (15)
EGA (7)
jPOST (5)
MassIVE (5)
iProX (4)
BioModels (3)
GPMDB (1)
MetaboLights (1)
PanoramaPublic (1)
PeptideAtlas (1)

Tissue

Leaf (3)
Cell culture (2)
Others (1)
B cell (1)
Binucleate cell (1)
Blood (1)
Bone marrow (1)
HeLa cell (1)
Hepatocyte (1)
Lymph node (1)
Ovary cancer cell line (1)
Regulatory T cell (1)
Retina (1)
T cell (1)
Trophozoite (1)
Urine (1)

Disease

HIV-associated dementia (1)
Diffuse large B-cell lymphoma (1)
Lung cancer (1)
Normal (1)
Not Available (1)
Acute leukemia (1)
Cervix carcinoma (1)
Giardiasis (1)
Lymphoma (1)
Salt (1)

Technology Type

Mass Spectrometry (15)
Shotgun proteomics (8)
Affinity purification coupled with mass spectrometry proteomics (4)
Data-independent acquisition (3)
Mass spectrometry assay (1)
Bottom-up proteomics (1)
Data-dependent acquisition (1)
SWATH MS (1)

Instrument Platform

Illumina NovaSeq 6000 (6)
Illumina HiSeq 2500 (5)
Illumina HiSeq 2000 (3)
Q Exactive (2)
Affymetrix miRNA 3.1 (1)
Not Applicable (1)
Not Applicablre (1)
Illumina Genome Analyzer II (1)
NextSeq 550 (1)
Instrument (1)
5975 Agilent GC-MS (1)
6540 Quadrupole Time-of-Flight LC/MS (Agilent instrument model) (1)
MaXis 4G (1)
Orbitrap Exploris 120 (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Liquid Chromatography MS - negative - reverse-phase (1)
Liquid Chromatography MS - negative - hilic (1)
LCQ Classic (1)

Publication Date

2011 (27)
2015 (21)
2014 (19)
2013 (19)
2012 (14)
2026 (12)
2010 (11)
2019 (10)
2009 (9)
2008 (9)
2023 (8)
2025 (8)
2024 (7)
2017 (6)
2021 (5)
2016 (5)
2022 (4)
2020 (4)
2018 (4)
2007 (1)
2006 (1)
2004 (1)

UNIPROT ID/AC

A0A1S3MBI7 (1)
A0A1S3RDV7 (1)
A0A1S3SLA8 (1)
B5X3P0 (1)
A0A1S3N3T3 (1)
A0A1S3NZZ4 (1)
A0A1S3P094 (1)
A0A1S3PY93 (1)
Q19VI0 (1)
A0A1S3M1N8 (1)
A0A1S3NHN0 (1)
A0A1S3KZD6 (1)
A0A1S3SD21 (1)
A0A1S3LDQ3 (1)
A0A1S3P3J9 (1)
A0A1S3LD76 (1)
A0A1S3LEH9 (1)
A0A1S3MF70 (1)
A0A1S3MF67 (1)
A0A1S3MEX0 (1)
A0A1S3MEU5 (1)
A0A1S3RYH9 (1)
A0A1S3RYI5 (1)
A0A1S3P4C7 (1)
A0A1S3P297 (1)
A0A1S3P8N0 (1)
A0A1S3PB08 (1)
A0A1S3N1B9 (1)
C0HBN7 (1)
A0A1S3LIF1 (1)

CHEBI ID

CHEBI:12305 (2)
CHEBI:4140 (2)
CHEBI:12306 (2)
CHEBI:37480 (2)
CHEBI:22374 (2)
CHEBI:59011 (2)
CHEBI:10232 (2)
CHEBI:20957 (2)
CHEBI:42878 (2)
CHEBI:12720 (2)
CHEBI:3667 (2)
CHEBI:13986 (2)
CHEBI:23214 (2)
CHEBI:44707 (2)
CHEBI:14108 (2)
CHEBI:21279 (2)
CHEBI:4358 (2)
CHEBI:21280 (2)
CHEBI:23592 (2)
CHEBI:58539 (2)
CHEBI:6210 (2)
CHEBI:427 (2)
CHEBI:18789 (2)
CHEBI:14203 (2)
CHEBI:11695 (2)
CHEBI:1764 (2)
CHEBI:43686 (2)
CHEBI:23886 (2)
CHEBI:11930 (2)
CHEBI:43163 (2)

Metabolite Name

2-Octyl-4-isothiazolin-3-one (1)
2-(4-chloro-1-{4-[2-(dimethylamino)ethoxy]phenyl}-2-phenylbut-1-en-1-yl)phenol (1)
4,13,14-trihydroxy-9-oxo-8,17-dioxatetracyclo[8.7.0.0(2),.0(1)(1),(1)]heptadeca-1(10),2,4,6,11(16),12,14-heptaen-5-yl acetate (1)
[(2R)-3-[(5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoxy]-2-[(9Z,12Z)-octadeca-9,12-dienoyl]oxypropyl] (4Z,7Z,10Z,13Z,16Z,19Z)-docosa-4,7,10,13,16,19-hexaenoate (1)
(3r,7r,11r,15r)-3,11-Bis[(5r)-2-amino-4,5-dihydro-1h-imidazol-5-yl]-7,15-dimethyl-1,9-dioxacyclohexadecane-2,10-dione (1)
[4-Hydroxy-3-(4-hydroxy-3,5-dimethoxyphenyl)-7-(4-sulooxyphenyl)-2,8-dioxatricyclo[7.3.1.05,13]trideca-1(12),3,5(13),6,9-pentaen-11-ylidene]oxidanium (1)
2-[4-[2-[3-[[4-[[[5-(6-aminopurin-9-yl)-4-hydroxy-3-phosphonatooxyoxolan-2-yl]methoxy-oxidophosphoryl]oxy-oxidophosphoryl]oxy-2-hydroxy-3,3-dimethylbutanoyl]amino]propanoylamino]ethylsulfanyl]-4-oxobutanoyl]benzoate (1)
(4aR,5R,6aR,6aS,6bR,8aR,10S,12aR,14bS)-5-hydroxy-2,2,6a,6b,9,9,12a-heptamethyl-10-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxymethyl]oxan-2-yl]oxy-1,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydropicene-4a-carboxylic acid (1)
CDP-DG(a-13:0/a-17:0) (1)
Unii-WZ5U45K71V (1)
3-(β-D-Galactopyranosyloxy)-2-hydroxypropyl (9Z,12Z)-octadeca-9,12-dienoate (1)
3(S)-Hydroxy-4(R),8-dimethyl-nonanoyl-CoA (1)
CDP-DG(a-13:0/i-18:0) (1)
3,4,5-trihydroxy-6-({5,6,14-trimethoxy-8,17-dioxatetracyclo[8.7.0.0(2),.0(1)(1),(1)]heptadeca-2,4,6,11(16),12,14-hexaen-4-yl}oxy)oxane-2-carboxylic acid (1)
MAG(16:1) (1)
NCGC00385137-01_C36H58O10_Hexopyranose, 1-O-(3,19,23-trihydroxy-28-oxours-12-en-28-yl)- (1)
5-[(1S,2R)-5,9-dihydroxy-2-(2-hydroxypropan-2-yl)-10-methoxy-11-methyl-6-oxo-1,2-dihydrofuro[2,3-c]acridin-1-yl]-6,10-dihydroxy-11-methoxy-3,3,12-trimethylpyrano[2,3-c]acridin-7-one (1)
2,3,4,7,8,9,15,22,23,28-decahydroxy-14-(hydroxymethyl)-12,27,31,34-tetraoxo-13,25,32,35-tetraoxaoctacyclo[14.13.3.3(1),(2).0,(3).0,(1)(1).0(1),(2).0(1),(2).0(2),(3)(3)]pentatriaconta-1,3,5(30),6,8,10,19(24),20,22,28-decaene-20-carboxylic acid (1)
(2S,3S,4S,5R,6R)-6-[[(3S,4aR,6aR,6bS,8aS,12aS,14aR,14bR)-4,4,6a,6b,14b-pentamethyl-11-methylidene-8a-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxycarbonyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-3,5-dihydroxy-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxane-2-carboxylic acid (1)
(1R,2S,5R,8S,9R,14S,16R,17S,18R,21R,24R,26S,27R)-5,14,16-trihydroxy-2,9,26-trimethyl-3,19,23,28-tetraoxaoctacyclo[16.9.1.118,27.01,5.02,24.08,17.09,14.021,26]nonacos-11-ene-4,10,22,29-tetrone (1)
[6,12,13,14-tetrahydroxy-4-(hydroxymethyl)-9-oxo-11-{6,7,13,14-tetrahydroxy-3,10-dioxo-2,9-dioxatetracyclo[6.6.2.0,(1).0(1)(1),(1)]hexadeca-1(15),4,6,8(16),11,13-hexaen-5-yl}-3,8-dioxatricyclo[8.4.0.0(2),]tetradeca-1(14),10,12-trien-5-yl]oxidanesulfonic acid (1)
(-)-Maackiain-3-O-glucosyl-6''-O-malonate (1)
UDP-4-amino-4,6-dideoxy-L-N-acetyl-beta-L-altrosamine (1)
[(2S,3S,4S,5S,6R)-6-[(1R)-1,2-dihydroxyethyl]-3,4,5-trihydroxyoxan-2-yl] dihydrogen phosphate (1)
Magnesium;3-[(21S,22S)-26-ethyl-16-(1-hydroxyethyl)-12,17,21-trimethyl-4-oxo-11-propyl-23,25-diaza-7,24-diazanidahexacyclo[18.2.1.15,8.110,13.115,18.02,6]hexacosa-1,5,8(26),9,11,13(25),14,16,18,20(23)-decaen-22-yl]propanoic acid (1)
[(1S,2R,6S,7R,9R,11R,12S,13S,14S,16R,17S)-16-[(1R)-1-[(2R)-4,5-dimethyl-6-oxo-2,3-dihydropyran-2-yl]ethyl]-6,12-dihydroxy-2,17-dimethyl-3-oxo-8,15-dioxahexacyclo[9.8.0.02,7.07,9.012,17.014,16]nonadec-4-en-13-yl] acetate (1)
Isopentenyl-Adenosine 13.0 eV (1)
Scorpion (1)
(2RS)-Lotaustralin (1)
UDP-2-acetamido-2,6-dideoxy-beta-L-talose (1)

First Public Date

2018 (8)
2022 (7)
2019 (7)
2023 (6)
2024 (4)
2026 (3)
2025 (3)
2014 (3)
2013 (2)
2021 (1)
2017 (1)
2016 (1)

Modelling Approach

Constraint-based model (3)

Lab affiliation

Department of Experimental Oncology, IEO, European Institute of Oncology IRCCS, Milan, Italy (2)
Department of Experimental Oncology, IEO, European Institute of Oncology IRCCS, Milan 20139, Italy (1)
Department of Human Genetics, Radboudumc, Nijmegen, The Netherlands (1)
Department of Medical Biophysics, University of Toronto (1)
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 50463, Republic of Korea (1)
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, 50463, Republic of Korea (1)
Department of Plant Bioscience, Pusan National University, Miryang 50463, South Korea (1)
Division of Cardiovascular Medicine, Radcliffe Department of Medicine, University of Oxford, Oxford, OX3 9DU, UK. (1)
Mass Spectroscopy Laboratory Intercollegiate Faculty of Biotechnology UG&MUG (1)
Max Planck Institute of Biochemistry (1)
Medical Biophysics (1)
Population Health and Immunity Division, Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia Faculty of Veterinary and Agricultural Sciences, The University of Melbourne, Melbourne, VIC, Australia (1)
University of Cologne, Faculty of Mathematics and Natural Sciences, Institute for Genetics, CECAD Research Center, Cologne, De (1)
University of Cologne, Faculty of Mathematics and Natural Sciences, Institute for Genetics, CECAD Research Center, Cologne, Germany (1)

IsPrivate

False (3)

Submitter Keywords

FROG (1)

Classification

bacteria (8)

Modification

1x(15)N labeled L-valine (1)

Study type

Transcription profiling by array (94)
RNA-seq of coding RNA (16)
RNA-seq of coding RNA from single cells (6)
RNA-seq of non coding RNA (6)
Comparative genomic hybridization by array (4)
ChIP-seq (4)
Methylation profiling by array (4)
Methylation profiling by high throughput sequencing (3)
Transcription profiling by SAGE (2)
Genotyping by array (2)
Other (2)
Unknown experiment type (1)
Animal - High-throughput sequencing (1)
ScATAC-seq (1)
Single nucleus RNA sequencing (1)
MicroRNA profiling by array (1)
DNA-seq (1)

Release Date

2022 (117)
2023 (93)
2024 (81)
2025 (74)
2021 (74)
2020 (54)
2019 (40)
2015 (32)
2011 (32)
2018 (27)
2014 (25)
2026 (23)
2017 (22)
2013 (22)
2016 (19)
2010 (15)
2012 (14)
2008 (11)
2009 (9)
2006 (6)
2007 (4)
2005 (2)
2004 (1)
2000 (1)

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Paenirhodobacter sp. MME-103

Genome sequencing of Paenirhodobacter sp. MME-103

PRJDB4657 | ENA

Roseovarius faecimaris strain:MME-070

Complete genome sequence of Roseovarius sp. MME-070

PRJNA508484 | ENA

MME+ fibro-adipogenic progenitors are the dominant adipogenic population during fatty infiltration in human skeletal muscle

PRJNA824807 | ENA

MME+ fibro-adipogenic progenitors are the dominant adipogenic population during fatty infiltration in human skeletal muscle

Fatty infiltration, the ectopic deposition of adipose tissue within skeletal muscle, is mediated via the adipogenic differentiation of fibro-adipogenic progenitors (FAPs). We used single-nuclei and single-cell RNA sequencing to characterize FAP heterogeneity in patients with fatty infiltration. We i...

ORGANISM(S): Mus musculus Homo sapiens

2023-01-18 | GSE200487 | GEO

Mutations in MME cause an autosomal-recessive Charcot-Marie-Tooth disease type 2.

Not available

S-EPMC5069600 | biostudies-literature

Variants in MME are associated with autosomal-recessive distal hereditary motor neuropathy.

Not available

S-EPMC6764622 | biostudies-literature

RNAseq transcriptomic data of the human mammary cell line MCF10A expressing a shRNA against MME (CD10) or a control shRNA

PRJNA775873 | ENA

Microglial CD31 Orchestrates Alzheimer’s Pathology via the SHP2–STAT3–MME Axis to Restrain Aβ Clearance

PRJNA1467650 | ENA