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TranscriptomicsSmall RNA profile in Moso Bamboo root and leaf
The small RNA libraries from Moso bamboo (Phyllostachy heterocycla) roots and leaves were constructed by using high definition adapters . The small RNA profiles were analyzed. A collection of micro RNAs with similarity to the micro RNA entries in mirbase were discovered. The putative genomic loci o...
ORGANISM(S): Phyllostachys edulis 
2014-08-01 | E-GEOD-55305 | biostudies-arrayexpress
TranscriptomicsMicroarray analysis of gene expression from different developmental stages of the tomato fruit
The goal of this research was to measure the gene expression levels thoughout 10 stages of tomato fruit development. Whole buds, flowers or fruits were collected at various developmental timepoints. Total RNA was extracted from 10 stages of flower and fruit development. A single technical and biolog...
ORGANISM(S): Solanum lycopersicum 
2012-08-29 | E-GEOD-22300 | biostudies-arrayexpress
TranscriptomicsHigh-throughput sequencing of small RNAs from different developmental stages of tomato fruits
Comparison of endogenous small RNA profiles from different developmental stages of tomato fruits Size fractionated small RNA from total RNA extracts was ligated to adaptors, purified again and reverse transcribed. After PCR amplification the sample was subjected to Solexa/Illumina high throughput py...
ORGANISM(S): Solanum lycopersicum 
2011-06-02 | E-GEOD-18110 | biostudies-arrayexpress
TranscriptomicsDetection of small RNAs generated during early infection of human HEK 293 cells by the alphavirus Sindbis virus
A time course of infection of the alphavirus Sindbis virus (SINV) was used to investigate the presence of viral specific vsRNA and the changes in miRNAs profiles in human embryonic kidney 293 cells (HEK293) by high throughput DNA sequencing. Deep sequencing of small RNAs early in SINV infection (4 a...
ORGANISM(S): Homo sapiens 
2013-12-01 | E-GEOD-46254 | biostudies-arrayexpress
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