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TranscriptomicsOscillating gene expression determines competence for periodic branching in the Arabidopsis root
The Oscillation Zone (OZ) of unsynchronized roots was dissected and divided into an upper (OZ2) and lower (OZ1) half . Samples were ordered according to DR5:GUS expression as analyzed by real time PCR to find periodic expression patterns Seedlings were grown for 5 days. 39 individual roots were diss...
ORGANISM(S): Arabidopsis thaliana 
2010-09-12 | E-GEOD-21611 | biostudies-arrayexpress
TranscriptomicsMYB36 regulates the transition from proliferation to differentiation in the Arabidopsis root
Stem cells are defined by their ability to self-renew and produce daughter cells that proliferate and mature. These maturing cells transition from a proliferative state to a terminal state through the process of differentiation. In the Arabidopsis thaliana root the transcription factors SCARECROW an...
ORGANISM(S): Arabidopsis thaliana 
2015-07-20 | E-GEOD-70584 | biostudies-arrayexpress
TranscriptomicsThe SHR/SCR pathway directly activates genes involved in asymmetric cell division in the Arabidopsis root
Asymmetric division of cortex/endodermal initials (CEI) in the Arabidopsis root generates two layers of ground tissue and is controlled by a finely orchestrated interplay between the transcription factors, SHORT ROOT (SHR) and SCARECROW (SCR). To understand the dynamics of the SHR/SCR regulatory ne...
ORGANISM(S): Arabidopsis thaliana 
2010-07-19 | E-GEOD-15876 | biostudies-arrayexpress
TranscriptomicsGenome-wide Identification of SHR Direct Targets Using a Custom Agilent Promoter Array
SHR is a key regulator of stem cell renewal and radial patterning in the Arabidopsis root. In previous studies we showed that the SHR is a transcriptional regulator and it regulates gene transcription directly. To fully understand the SHR developmental pathway, we aim to identify its direct target a...
ORGANISM(S): Arabidopsis thaliana 
2010-07-18 | E-GEOD-21338 | biostudies-arrayexpress
UnknownMolecular Transducers from Roots Are Triggered in Arabidopsis Leaves by Root-Knot Nematodes for Successful Feeding Site Formation: A Conserved Post-Embryogenic De novo Organogenesis Program?
Not available
S-EPMC5445185 | biostudies-literature
UnknownSynthetically derived BiAux modulates auxin co-receptor activity to stimulate lateral root formation.
Not available
S-EPMC11142373 | biostudies-literature
UnknownThe cold-induced factor CBF3 mediates root stem cell activity, regeneration, and developmental responses to cold.
Not available
S-EPMC10721530 | biostudies-literature
UnknownExogenous bacterial cellulose induces plant tissue regeneration through the regulation of cytokinin and defense networks.
Not available
S-EPMC11817927 | biostudies-literature
UnknownAn auxin-regulable oscillatory circuit drives the root clock in Arabidopsis.
Not available
S-EPMC7775764 | biostudies-literature
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