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TranscriptomicsComparative transcriptomics of Rhizobium mesoamericanum STM3625, Cupriavidus taiwanensis LMG19424 and Burkholderia phymatum STM815 when induced by root exudates of Mimosa pudica
We analysed the transcriptomic response of 3 rhizobial symbionts of Mimosa pudica (Rhizobium mesoamericanum STM3625, Cupriavidus taiwanensis LMG19424 and Burkholderia phymatum STM815) when cultivated in a minimum culture medium (control condition) versus induced by root exudates of their host plant ...
ORGANISM(S): Cupriavidus taiwanensis LMG 19424 
2018-01-15 | E-MTAB-4144 | biostudies-arrayexpress
TranscriptomicsRNAseq of roots and leaves of tender wheat (Triticum aestivum cv chinese Spring) during interactions with mycorhizal fungi (Funneliformis mossae) with and without a pathogen attack by Xanthomonas translucens
We monitored by RNAseq the transcriptomic response of roots and leaves of Triticum aestivum cv chinese Spring during a long term interaction with Funneliformis mossae (2 months) with or without a pathogen infection by infiltration of Xanthomonas translucens CFBP 2054. The control condition of roots ...
ORGANISM(S): Triticum aestivum 
2018-06-01 | E-MTAB-5898 | biostudies-arrayexpress
TranscriptomicsRNA-seq of wheat leaves and roots in response to Xanthomonas translucens infection
This study aimed at decrypting the transcriptomic response of 2 months-old grown tender wheat (cv Chinese Spring) to a the Xanthomonas translucens pathogen infection by infiltration. The response was monitored by RNAseq 24h post leaf clipping. Triticum aestivum cv. Chinese Spring plants were mainta...
ORGANISM(S): Triticum aestivum 
2017-09-01 | E-MTAB-5891 | biostudies-arrayexpress
TranscriptomicsRNAseq of roots and leaves of tender wheat (Triticum aestivum cv. Chinese Spring) during interaction with plant-growth-promoting rhizobacteria Azospirillum brasilense sp245 and Burkholderia graminis C4D1M
We monitored the transcriptomic response of roots and leaves of Triticum aestivum (cv Chinese Spring) at 2 months following the root inoculation by Azospirillum brasilense sp245 or Burkholderia graminis C4D1M. Plants were grown in pot containing a solid substrate (sand+soil) and 3 plants per pot, co...
ORGANISM(S): Triticum aestivum 
2022-12-31 | E-MTAB-5896 | biostudies-arrayexpress
TranscriptomicsComparative transcriptomics of 5 Mesorhizobium strains (ORS3324, ORS3359, ORS3356, ORS3365, STM8773) under salt stress
We analysed the transcriptomic response by RNAseq of 5 Mesorhizobium strains with different tolerance to the presence of salt (NaCl) in their liquid culture medium (medium used TY- Tryptone Yeast Extract).
ORGANISM(S): Mesorhizobium plurifarium 
2023-12-22 | E-MTAB-4148 | biostudies-arrayexpress
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