Mta - OmicsDI

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Unknown (1968)
Genomics (140)
Transcriptomics (78)
Metabolomics (58)
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Organisms

Homo sapiens (55)
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Chlamydomonas reinhardtii (14)
Enterococcus mundtii CRL35 (14)
Oncorhynchus tshawytscha (14)
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Human alphaherpesvirus 1 strain 17 (14)
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Marchantia polymorpha subsp. ruderalis (14)
Methylocystis sp. (14)
Exiguobacterium sp. SH31 (14)
Palaemonetes sp. common grass shrimp associated circular virus (14)
Amaranthus tricolor (14)
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Organisms

Mus musculus (45)
Arabidopsis thaliana (24)
Homo sapiens (24)
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urban metagenome (1)
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Tetrahymena thermophila (1)
Fragaria x ananassa (1)
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Repository

ENA (123)
geo (53)
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biostudies-arrayexpress (40)
pride (14)
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Tissue

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Date palm fruit (1)
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Disease

Malaria (4)
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Disease free (1)

Technology Type

Mass Spectrometry (66)
ESI (47)
EI (12)
Affinity purification coupled with mass spectrometry proteomics (5)
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Shotgun proteomics (4)
Chemical cross-linking coupled with mass spectrometry proteomics (3)
Mass spectrometry (2)
Unspecified (2)
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MSE (1)
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Bottom-up proteomics (1)

Instrument Platform

Illumina NovaSeq 6000 (5)
Orbitrap Fusion (3)
TripleTOF 5600 (2)
Liquid Chromatography MS - positive - hilic (2)
TimsTOF HT (1)
Orbitrap Exploris 480 (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

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2020 (9)
2012 (9)
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2013 (4)
2010 (4)
2011 (3)
2016 (2)
2015 (1)
2009 (1)
2007 (1)
2017 (1)
2008 (1)

UNIPROT ID/AC

A0A1S3MBI7 (1)
A0A1S3RDV7 (1)
A0A1S3SLA8 (1)
B5X3P0 (1)
A0A1S3N3T3 (1)
A0A1S3NZZ4 (1)
A0A1S3P094 (1)
A0A1S3PY93 (1)
Q19VI0 (1)
A0A1S3M1N8 (1)
A0A1S3NHN0 (1)
A0A1S3KZD6 (1)
A0A1S3SD21 (1)
A0A1S3LDQ3 (1)
A0A1S3P3J9 (1)
A0A1S3LD76 (1)
A0A1S3LEH9 (1)
A0A1S3MF70 (1)
A0A1S3MF67 (1)
A0A1S3MEX0 (1)
A0A1S3MEU5 (1)
A0A1S3RYH9 (1)
A0A1S3RYI5 (1)
A0A1S3P4C7 (1)
A0A1S3P297 (1)
A0A1S3P8N0 (1)
A0A1S3PB08 (1)
A0A1S3N1B9 (1)
C0HBN7 (1)
A0A1S3LIF1 (1)

CHEBI ID

CHEBI:13097 (1)
CHEBI:21278 (1)
CHEBI:63163 (1)
CHEBI:6209 (1)
CHEBI:44590 (1)
CHEBI:21260 (1)
CHEBI:44513 (1)
CHEBI:6206 (1)
CHEBI:44708 (1)
CHEBI:44466 (1)
CHEBI:13094 (1)
CHEBI:47822 (1)
CHEBI:60107 (1)
CHEBI:21486 (1)
CHEBI:60111 (1)
CHEBI:43088 (1)
CHEBI:47823 (1)
CHEBI:28538 (1)
CHEBI:47819 (1)
CHEBI:47821 (1)
CHEBI:21601 (1)
CHEBI:7203 (1)
CHEBI:77859 (1)
CHEBI:19473 (1)
CHEBI:11524 (1)
CHEBI:1021 (1)
CHEBI:12542 (1)
CHEBI:47984 (1)
CHEBI:1022 (1)
CHEBI:42925 (1)

Metabolite Name

Malic acid (4)
Thymidine (4)
Glycerol (3)
Glycolic acid (3)
Deoxyuridine (3)
Glutathione (3)
Citric acid (3)
Stearic acid (3)
Glyceric acid (3)
Adenosine (3)
NADH (3)
Adenine (3)
Xanthine (3)
Guanosine (3)
Uridine (3)
Inosine (3)
Hypoxanthine (3)
4-Hydroxyphenylpyruvate (2)
G6P (2)
L-Homocysteic acid (2)
D-Glucuronic acid (2)
Galacturonic acid (2)
Folic acid (2)
D-Xylose (2)
Ribitol (2)
N-Acetyl-D-glucosamine (2)
Pyruvic acid (2)
4-Hydroxy-3-methylbenzoic acid (2)
D-Fructose (2)
2-Oxo-4-methylthiobutanoic acid (2)

First Public Date

2025 (24)
2024 (20)
2021 (12)
2020 (11)
2019 (11)
2023 (10)
2018 (10)
2022 (7)
2017 (5)
2026 (4)
2014 (4)
2016 (3)
2015 (1)
2013 (1)

Modelling Approach

Constraint-based model (1)

Study status

Active, not recruiting (1)

Lab affiliation

Department of Hepatology, Proteomics laboratory. CIMA, University of Navarra. 31008 Pamplona, Spain. (1)
School of Life and Environmental Sciences, University of Sydney, NSW Australia (1)
Department of Genetics, Cell- and Immunobiology, Semmelweis University, Budapest, Hungary MTA-SE Immune-Proteogenomics Extracellular Vesicle Research Group, Budapest, Hungary HCEMM-SE Extracellular Vesicles Research Group, Budapest, Hungary (1)
MTA-ELTE Lendület Ion Mobility Mass Spectrometry Research Group, Eotvos Lorand University, Hungary (1)
Extracellular Vesicles and Mass Spectrometry Laboratory, Institute of Biosciences and BioResources, National Research Council of Italy, 80131 Naples, Italy (1)
PROFESSOR JOHN RASKO, AO BSc(Med), MBBS(Hons), PhD, MAICD, FFSc(RCPA), FRCPA, FRACP, FAHMS Head of Department, Cell & Molecular Therapies, Royal Prince Alfred Hospital, Professor, Faculty of Medicine & Health, The University of Sydney, Head, Gene and Stem Cell Therapy Program, Centenary Institute. Level 2, Building 89, Missenden Road, CAMPERDOWN NSW 2050, AUSTRALIA Tel 02 95656160 | Fax 02 9565 6101 | j.rasko@centenary.org.au‌ (1)
Microchemistry and Proteomics Core Facility, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA (1)
Department of Molecular Biology, Radboud Institute for Molecular Life Sciences, Radboud University, Nijmegen, The Netherlands (1)
Room C33 Plant Sciences Sutton Bonington Campus, the University of Nottingham Sutton Bonington Leicestershire LE12 5RD UK (1)
Department of Convergence Medicine, Convergence Medicine Research Center/Biomedical Research Center, Asan Medical Center, Asan Institute for Life Sciences, University of Ulsan College of Medicine, 88 Olympic-ro 43-gil, Songpa-gu, Seoul 05505, Republic of Korea. (1)
Nuffield Department of Medicine (1)
Proteomics Center, Erasmus MC (1)
Erasmus MC (1)
Department of oncology UNIL CHUV Ludwig Institute for Cancer Research Lausanne Office B25A/04/94 Rue du Bugnon 25a, CH-1005 Lausanne (1)

Keyword

Vitamin D (1)

IsPrivate

False (1)

Classification

bacteria (4)

Study type

Transcription profiling by array (21)
RNA-seq of coding RNA (4)
Comparative genomic hybridization by array (2)
Other (2)
ChIP-seq (2)
Methylation profiling by array (2)
Cell line - Methylation microarray (1)
Animal - One-color microarray (1)
Cell line - One-color microarray (1)
Genotyping by array (1)
RNA-seq of coding RNA from single cells (1)
RNA-seq of total RNA (1)
RNA-seq of non coding RNA (1)
Interventional (1)

Release Date

2020 (225)
2021 (209)
2019 (189)
2022 (186)
2023 (175)
2018 (162)
2025 (154)
2017 (153)
2024 (139)
2016 (106)
2015 (104)
2014 (77)
2013 (31)
2012 (24)
2026 (21)
2011 (12)
2009 (9)
2010 (8)
2007 (5)
2008 (5)
2006 (3)
2002 (3)
2005 (2)
2003 (2)
1998 (2)
2004 (1)

Location

United States (1)

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Gene expression profiling of sarcoma cells treated with mithramycin A (MTA), nano-encapsulated MTA or MTA-analogs

PRJNA678952 | ENA

Gene expression profiling of sarcoma cells treated with mithramycin A (MTA), nano-encapsulated MTA or MTA-analogs

This study was designed to gain insight about the mechanisms involved in the anti-tumor effects of mithramycin A (MTA) and the MTA analog EC-8042 in sarcoma cells. In addition, we also studied whether this molecular features could be influenced by the nano-encapsulation of MTA.

ORGANISM(S): Homo sapiens

2021-03-30 | GSE161616 | GEO

Profiling of N6-methyladenosine (m6A) in Arabidopsis wild type and ABI3:MTA

PRJNA428515 | ENA

N6-methyladenosine mRNA methylomes in the MTA RNAi strawberry fruits and the controls

PRJNA731153 | ENA

GMUCT sequencing of 4 week old leaves in Arabidopsis ABI3:MTA plants

PRJNA428514 | ENA

mRNA sequencing of 4 week old leaves in Arabidopsis wild type and ABI3:MTA

PRJNA428511 | ENA

ADGRL3 (LPHN3) variants are associated with a refined phenotype of ADHD in the MTA study.

Not available

S-EPMC5023939 | biostudies-literature

N6-methyladenosine mRNA methylomes in the MTA RNAi strawberry fruits and the controls

For exploring the influence of the m6A methyltransferase gene MTA silencing in the global m6A mRNA methylomes of strawberry fruits, we performed m6A-seq in the MTA RNAi strawberry fruits (RNAi-MTA) and the controls with three independently biological replicates. Results showed that MTA silencing ind...

ORGANISM(S): Fragaria x ananassa

2021-05-20 | GSE174703 | GEO

Cytotoxicity and genotoxicity of Bio-C Repair, Endosequence BC Root Repair, MTA Angelus and MTA Repair HP.

Not available

S-EPMC10208289 | biostudies-literature

mRNA adenosine methylase (MTA) deposits m6A on pri-miRNAs to modulate miRNA biogenesis in Arabidopsis thaliana [smallRNAs]

PRJNA505486 | ENA

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2278 Results

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