Mukherjee G G - OmicsDI

OmicsDI

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1151 Results

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Unknown (1043)
Transcriptomics (54)
Proteomics (39)
Metabolomics (8)
Genomics (7)
Multiomics (1)

Organisms

Homo sapiens (47)
Schizophyllum commune H4-8 (32)
Mycobacterium tuberculosis SP7 (32)
Oryza sativa Japonica Group (32)
Candidatus Endoriftia persephonae (32)
Mycobacterium tuberculosis SP10 (32)
Mycobacterium tuberculosis SP13 (32)
Mycobacterium tuberculosis SP22 (32)
Chlamydomonas reinhardtii (32)
Pyricularia oryzae P131 (32)
Enterococcus mundtii CRL35 (32)
Oncorhynchus tshawytscha (32)
Pseudomonas canadensis (32)
Strongylocentrotus purpuratus (32)
Influenza A virus (A/California/04/2009(H1N1)) (32)
Homo (32)
Pseudomonas aeruginosa PAO1H2O (32)
Human alphaherpesvirus 1 strain 17 (32)
Quercus petraea (32)
Canis lupus (32)
Mycobacterium tuberculosis SP1 (32)
Marchantia polymorpha subsp. ruderalis (32)
Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 (32)
Methylocystis sp. (32)
Mus musculus (7)
Arabidopsis thaliana (3)
Leishmania major (1)
synthetic construct (1)
Streptococcus pneumoniae (1)
Rattus norvegicus (1)

Repository

biostudies-arrayexpress (58)
pride (32)
MetaboLights (8)
EGA (5)
MassIVE (5)

Tissue

Brain (9)
Epithelial cell (5)
Blood plasma (4)
Gall bladder (3)
Gut (3)
Ovary (3)
Heart (3)
Spinal cord (3)
Embryo (3)
Testis (3)
Kidney (3)
Liver (3)
Cell culture (3)
Scale (2)
Fin (2)
Gill (2)
Eye (2)
Skin (2)
Skeletal muscle (2)
Cell suspension culture (2)
Spleen (2)
Gas bladder (1)
Cytotoxic T-lymphocyte (1)
Rectum (1)
Frontal lobe (1)
Helper T-lymphocyte (1)
Skin fibroblast (1)
Foreskin fibroblast cell line (1)
Swim bladder (1)
Natural killer cell (1)

Disease

Brain cancer (4)
Alzheimer's disease (1)
Malignant neoplasm of ovary (1)
COVID-19 (1)

Technology Type

Mass Spectrometry (32)
Shotgun proteomics (17)
Bottom-up proteomics (9)
Mass spectrometry (8)
Data-dependent acquisition (5)
Affinity purification coupled with mass spectrometry proteomics (5)
Gel-based experiment (4)
Chemical cross-linking coupled with mass spectrometry proteomics (1)

Instrument Platform

Illumina HiSeq 2000 (7)
Liquid Chromatography MS - positive - reverse phase (3)
454 GS FLX+ (2)
Q Exactive (2)
Illumina Genome Analyzer IIx (1)
Exactive Plus (1)
LTQ Orbitrap Velos (1)
LTQ Orbitrap Elite (1)
Q Exactive Plus (1)
Orbitrap Exploris 480 (1)
Xevo TQ MS (Waters) (1)
Liquid Chromatography MS - - hilic (1)
Liquid Chromatography MS - alternating (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - alternating - hilic (1)

Publication Date

2013 (12)
2015 (10)
2011 (10)
2022 (10)
2021 (10)
2012 (8)
2025 (7)
2020 (7)
2014 (6)
2010 (5)
2024 (5)
2016 (3)
2008 (3)
2017 (2)
2023 (2)
2009 (1)
2006 (1)
2005 (1)

CHEBI ID

CHEBI:28044 (6)
CHEBI:27266 (6)
CHEBI:25094 (5)
CHEBI:18237 (5)
CHEBI:18186 (5)
CHEBI:28300 (5)
CHEBI:16708 (5)
CHEBI:24898 (5)
CHEBI:18211 (5)
CHEBI:15891 (5)
CHEBI:29016 (5)
CHEBI:16737 (5)
CHEBI:16919 (5)
CHEBI:27897 (5)
CHEBI:90333 (4)
CHEBI:45441 (4)
CHEBI:17822 (4)
CHEBI:26271 (4)
CHEBI:17126 (4)
CHEBI:22660 (4)
CHEBI:22653 (4)
CHEBI:27570 (4)
CHEBI:26986 (4)
CHEBI:16811 (4)
CHEBI:18257 (4)
CHEBI:15676 (4)
CHEBI:17755 (4)
CHEBI:25017 (4)
CHEBI:15428 (4)
CHEBI:6650 (4)

Metabolite Name

Cystathionine (4)
Adenine (4)
Sphinganine (3)
Phenylpyruvate (3)
Indolelactate (3)
Tryptophan (3)
Taurine (3)
Serine (3)
Pseudouridine (3)
Proline (3)
Lysine (3)
Hypoxanthine (3)
Fumarate (3)
Citrulline (3)
Asparagine (3)
Arginine (3)
AMP (3)
Allantoin (3)
Histidine (3)
Xanthine (3)
Phenylalanine (3)
Tyrosine (3)
Threonine (3)
Methionine (3)
Creatinine (3)
Creatine (3)
Glutamine (3)
Ornithine (3)
Alanine (3)
Valine (3)

Study type

Transcription profiling by array (27)
RNA-seq of coding RNA (13)
Comparative genomic hybridization by array (5)
RNA-seq of non coding RNA (4)
Other (2)
ChIP-seq (2)
Unknown experiment type (1)
Proteomic profiling by mass spectrometer (1)
ChIP-chip by array (1)
Antigen profiling (1)
Genotyping by high throughput sequencing (1)

Release Date

2025 (130)
2021 (121)
2022 (108)
2024 (102)
2023 (99)
2020 (91)
2019 (73)
2016 (50)
2017 (45)
2018 (45)
2013 (42)
2014 (39)
2015 (38)
2012 (36)
2011 (26)
2010 (14)
2026 (11)
2008 (10)
2009 (9)
2007 (3)
2006 (2)
2004 (2)
1999 (2)
2005 (1)
2002 (1)
2001 (1)

Lab affiliation

University of Bordeaux, INSERM, MRGM, U1211, F-33000 Bordeaux, France. ImmunoConcEpT, CNRS UMR 5164, INSERM ERL 1303, University of Bordeaux, Bordeaux, France. (3)
PI BSBE PROTEOMICS LAB IIT BOMBAY (1)
PROFESSOR, PI, PROTEOMICS LAB, DEPARTMENT OF BIOSCIENCES AND BIOENGINEERING, IIT BOMBAY (1)
PROFESSOR, PRINCIPLE INVESTIGATOR, PROTEOMICS LAB, BSBE, IIT BOMBAY (1)
PROFESSOR, PRINCIPLE INVESTIGATOR, PROTEOMICS LAB, DEPARTMENT OF BIOSCIENCES AND BIOENGINEERING, IIT BOMBAY (1)
University of Tuebingen - Interfaculty Institute of Biochemistry (1)
Univ. Bordeaux, INSERM, MRGM, U1211, F-33000 Bordeaux, France. ImmunoConcEpT, CNRS UMR 5164, INSERM ERL 1303, University of Bordeaux, Bordeaux, France (1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, University of Utrecht Netherlands Proteomics Center, Padualaan 8, 3584 CH Utrecht, The Netherlands (1)
University of Michigan Medical School, Department of Biological Chemistry, Ann Arbor, MI (1)
University of California San Francisco, USA (1)
Department of Molecular Biology, Cell Biology, and Biochemistry/Center of Genomics and Proteomics, Brown University, Providence, Rhode Island 02903, USA (1)
Institute of Biochemistry II; University Hospital of Goethe University Frankfurt Building 75 ,Ground floor, Room 0.205 Theodor-Stern-Kai 7 60590 Frankfurt am Main, Germany (1)
Department of Biosciences and bioengineering, IIT Bombay, India, 400076 (1)
Florey Institute (1)
Department of Anaesthesia and Intensive Care, Post Graduate Institute of Medical Education and Research, Chandigarh 160012, India. (1)
Institue of Biochemistry 2, Buchmann institute for Molecular Life Sciences (1)
University of Geneva, Department of Microbiology and Molecular Medicine (1)
Department of biosciences and Bioengineering, IIT Bombay (1)
Max Planck Institute of Biophysics (1)
Jiangsu Academy of Agricultural Sciences (1)
Dpt. of Microbiology and molecular medicine, Universtity of Geneva, Geneva, Switzerland (1)
Institute of Parasitology, University of Zurich (1)
McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University, Baltimore, Maryland 21205 USA (1)
Department of Chemical and Biological Engineering University of Sheffield Mappin Street, Sheffield S1 3JD United Kingdom (1)
Biomolecular Mass Spectrometry and Proteomics Utrecht Institute for Pharmaceutical Sciences (UIPS) (1)
McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, Maryland 21205 USA (1)
Proteomics Lab, 304, BSBE Department, Indian Institute Technology Bombay, Powai, Mumbai, India-400076 (1)
Leibniz-Institut für Analytische Wissenschaften – ISAS – e.V. (1)
Associate Professor, Institute of Advanced Study in Science and Technology (IASST), Guwahati-110035, Assam, India (1)
Institute of Biochemistry II, Faculty of Medicine, Goethe University, Theodor-Stern-Kai 7, 60590 Frankfurt am Main, Germany (1)