Multi-organ - OmicsDI

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Unknown (3382)
Transcriptomics (3041)
Genomics (770)
Proteomics (175)
Metabolomics (146)
Other (22)
Models (12)
Genomic (7)
Methylation profiling (7)
Clinical (5)

Organisms

Mus musculus (1173)
Homo sapiens (768)
Rattus norvegicus (308)
Sus scrofa (81)
Arabidopsis thaliana (79)
Drosophila melanogaster (76)
Danio rerio (76)
Caenorhabditis elegans (62)
Saccharomyces cerevisiae (46)
Gallus gallus (43)
Bos taurus (38)
Rattus rattus (24)
Macaca mulatta (19)
Ovis aries (18)
Xenopus laevis (18)
Oncorhynchus mykiss (18)
Canis lupus familiaris (13)
Vibrio cholerae (10)
Escherichia coli (10)
Equus caballus (8)
Pimephales promelas (7)
Schizosaccharomyces pombe (7)
Helicobacter pylori (7)
Mycobacterium tuberculosis (7)
Streptococcus pneumoniae (7)
Oryctolagus cuniculus (7)
Candida albicans (7)
Tetronarce californica (2)
Murinae (1)
Mammalia (1)

Organisms

Mus musculus (174)
Homo sapiens (138)
Rattus norvegicus (19)
Gallus gallus (9)
Danio rerio (8)
human gut metagenome (5)
Arabidopsis thaliana (4)
Quercus robur (3)
Drosophila melanogaster (3)
Macaca fascicularis (2)
Oncorhynchus mykiss (2)
Macaca mulatta (2)
human metagenome (2)
Sus scrofa (2)
Leptospira borgpetersenii serovar Hardjo (1)
Thamnophis elegans (1)
Pristolycus diversecostatus (1)
Python bivittatus (1)
Aeromonas schubertii (1)
Hansenia weberbaueriana (1)
Jasminum sambac (1)
Dermacentor variabilis (1)
Leishmania donovani (1)
Bacillus siamensis (1)
Trueperella pyogenes (1)
Chlorocebus aethiops (1)
Hordeum vulgare (1)
Vibrio vulnificus (1)
Taeniopygia guttata (1)
Scophthalmus maximus (1)

Repository

biostudies-arrayexpress (2908)
ENA (535)
geo (347)
MetaboLights (143)
MassIVE (70)
pride (60)
EGA (53)
iProX (30)
BioModels (11)
GPMDB (9)
PAXDB (9)
dbGaP (7)
GNPS (3)
PanoramaPublic (3)
jPOST (2)
NODE (2)
FAIRDOMHub (1)

Tissue

Liver (14)
Brain (8)
Blood plasma (7)
Kidney (7)
Heart (6)
Midgut (6)
Blood serum (5)
Cell culture (4)
Lung (4)
Spleen (4)
Intestine (3)
Pancreas (3)
Multi organ (2)
Flower (2)
Flower bud (2)
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Seed (2)
Skin (2)
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Blood (1)
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Colon (1)
Early embryonic cell (1)
Fibroblast (1)

Disease

Normal (16)
Tuberculosis (1)
Neonatal abstinence syndrome (1)
Retinoblastoma (1)
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Toxicity (1)
Idiopathic myelofibrosis (1)
Glaucoma (1)
Burn injury (1)
Pseudomonas aeruginosa rsmA mutant infected (1)
T. circumcincta infection (1)
Liver cancer (1)
Alzheimer's disease (1)
Specific-pathogen free (SPF) (1)
Not applicable (1)
Rett syndrome (1)
Ischaemia reperfusion injury (1)
Sham infected (1)
B. dendrobatidis infection (1)
HIV (1)
Folate deficiency (1)
Pneumococcal meningitis (1)
Imatinib-resistant CML cell line subclone (1)
Subarachnoid hemorrhage NOS (1)
Cardiac defects (1)
Infected (1)
TAC operated 5 hours after surgery (1)
Scrapie infected (1)
Malignant fibrous histiocytoma (1)
Dukes D primary colon cancer (1)

Technology Type

Mass spectrometry (93)
Mass Spectrometry (60)
Mass spectrometry assay (44)
Shotgun proteomics (34)
Bottom-up proteomics (19)
Data-independent acquisition (9)
NMR spectroscopy (6)
Data-dependent acquisition (5)
Top-down proteomics (3)
ILLUMINA, Illumina HiSeq 2000 (2)
NMR spectroscopy assay (2)
SWATH MS (2)
Applied Biosystems 3100 automated sequencer-GeneMarker v.1.6 (Softgenetics) (1)
Illumina HiSeq 2000 (1)
Affinity purification coupled with mass spectrometry proteomics (1)
All-ion fragmentation (1)

Instrument Platform

Illumina HiSeq 2500 (63)
Illumina NovaSeq 6000 (59)
Illumina HiSeq 4000 (50)
Illumina HiSeq 2000 (42)
NextSeq 500 (18)
Illumina MiSeq (12)
Illumina HiSeq 1500 (9)
Illumina Genome Analyzer IIx (8)
NextSeq 2000 (8)
Scanning hardware (7)
Axon GenePix 4000B scanning hardware (7)
Genepix (4)
Affymetrix GeneChip Scanner 3000 7G (4)
Illumina Genome Analyzer II (4)
GenePix Professional 4200A [Axon Instruments] (3)
GenePix 4000A [Axon Instruments] (3)
Axon- GenePix4000B (3)
ScanArray Express HT [PerkinElmer] (3)
Illumina HiSeq 1000 (3)
NextSeq 550 (3)
454 GS FLX (2)
Agilent High resolution C scanner (2)
Agilent G2565BA (2)
Illumina Genome Analyzer (2)
Chemostat (2)
Illumina HiSeq X (2)
MinION (2)
NanoString nCounter (1)
Fluidic station FS450 (1)
GCS3000 7G (1)

Publication Date

2010 (371)
2014 (323)
2012 (288)
2015 (282)
2013 (268)
2011 (225)
2008 (194)
2016 (171)
2005 (170)
2009 (150)
2025 (131)
2026 (130)
2022 (118)
2024 (110)
2023 (103)
2021 (98)
2007 (95)
2020 (81)
2006 (72)
2018 (68)
2017 (52)
2019 (46)
2004 (9)
2002 (5)
2003 (4)

UNIPROT ID/AC

14331_CAEEL (3)
14332_CAEEL (3)
1433B_MOUSE (3)
1433E_MOUSE (3)
1433F_MOUSE (3)
1433G_MOUSE (3)
1433T_MOUSE (3)
1433Z_MOUSE (3)
2A51_CAEEL (3)
2AAA_CAEEL (3)
2AAA_MOUSE (3)
2AB1_CAEEL (3)
3HIDH_CAEEL (3)
3HIDH_MOUSE (3)
4F2_MOUSE (3)
6239.AH9.3 (3)
6239.C02G6.1 (3)
6239.C03G6.18 (3)
6239.C10C5.1b (3)
6239.C11H1.8 (3)
6239.C32E8.10c (3)
6239.C34C6.2c (3)
6239.C50F4.7 (3)
6239.CE7X_3.2 (3)
6239.F07B7.10 (3)
6239.F07B7.3 (3)
6239.F07B7.4 (3)
6239.F07B7.5 (3)
Q9QX98 (1)
P70661 (1)

CHEBI ID

CHEBI:16856 (19)
CHEBI:46195 (11)
CHEBI:24092 (1)
CHEBI:49609 (1)
CHEBI:14282 (1)
CHEBI:5150 (1)
CHEBI:21821 (1)
CHEBI:7373 (1)
CHEBI:58763 (1)
CHEBI:48957 (1)
CHEBI:42126 (1)
CHEBI:20516 (1)
CHEBI:14172 (1)
CHEBI:15890 (1)
CHEBI:4620 (1)
CHEBI:17327 (1)
CHEBI:14836 (1)
CHEBI:8193 (1)
CHEBI:26121 (1)
CHEBI:17090 (1)
CHEBI:58011 (1)
CHEBI:14885 (1)
CHEBI:8400 (1)
CHEBI:26260 (1)
CHEBI:85008 (1)
CHEBI:20349 (1)
CHEBI:11979 (1)
CHEBI:1813 (1)
CHEBI:85531 (1)
CHEBI:13888 (1)

Metabolite Name

Taurine (31)
Hypoxanthine (31)
Adenosine (30)
Guanosine (30)
Choline (29)
Uridine (29)
Xanthine (28)
Adenine (27)
Creatine (27)
Guanine (26)
Betaine (25)
Riboflavin (23)
Inosine (23)
Cytidine (22)
Creatinine (22)
Pyroglutamic acid (21)
Pantothenic acid (21)
Uracil (20)
Cytosine (19)
L-Tyrosine (19)
L-Phenylalanine (19)
Citrulline (18)
Xanthosine (18)
Phenylalanine (18)
L-Proline (17)
Citric acid (17)
Deoxyinosine (17)
Azelaic acid (17)
Pyridoxal (17)
Thymine (16)

First Public Date

2026 (126)
2025 (87)
2023 (63)
2024 (59)
2022 (42)
2021 (36)
2020 (31)
2019 (28)
2014 (25)
2018 (14)
2016 (7)
2017 (6)
2013 (6)
2015 (5)

Modelling Approach

Ordinary differential equation model (8)
Physiologically based pharmacokinetic model (1)
Agent-based model (1)
Constraint-based model (1)

Study status

Recruiting (4)
Completed (1)

Lab affiliation

Department of Entomology,Institute of Vegetables and Flowers,Chinese Academy of Agriculture Sciences,Beijing,100081,China (6)
University of Vienna, Faculty of Chemistry, Department of Analytical Chemistry (3)
Proteomics facility, Central Science Laboratory, University of Tasmania (2)
1) Department of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center (MDACC), Houston, TX 77030, USA 2) Proteomics Core Facility, Department of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center (MDACC), Houston, TX 77030, USA 3) Metabolomics Core Facility, Department of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center (MDACC), Houston, TX 77030, USA (1)
Albert Resnick, M.D. Associate Professor Head, Weslie R. and William H. Janeway Laboratory of Molecular Metabolism The Rockefeller University (1)
AstraZeneca (1)
Ben-Gurion University (1)
Brigham and Women's Hospital, Harvard Medical School (1)
Cardio-Thoracic Translational Medicine (CTTM) Lab, Department of Surgical Sciences, Uppsala University, 752 37 Uppsala, Sweden (1)
Centre for Cardiovascular Biology and Disease Research, La Trobe Institute for Molecular Science and Department of Microbiology, Anatomy, Physiology and Pharmacology, School of Agriculture, Biomedicine and Environment, La Trobe University, Bundoora, VIC, Australia (1)
Cincinnati Children’s Hospital Medical Center (1)
Clinical Proteomics Medizinisches Proteom-Center Ruhr-University Bochum and Department of Anesthesiology, Intensive Care Medicine and Pain Therapy University Hospital Knappschaftskrankenhaus Bochum (1)
Clinical Proteomics, Medizinisches Proteom-Center, Ruhr-University Bochum; Department of Anesthesiology, Intensive Care Medicine and Pain Therapy, University Hospital, Knappschaftskrankenhaus Bochum (1)
Departamento de Produção Animal Instituto Superior de Agronomia Tapada da Ajuda 1349-017 Lisboa Portugal (1)
Department of Biochemistry, Emory School of Medicine (1)
Department of Biology, University of Copenhagen, 2100 Copenhagen O, Denmark (1)
Department of Child Health and Child Health Research Institute, School of Medicine, University of Missouri, Columbia, MO, United States (1)
Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN 55905, USA (1)
Department of Medicinal Chemistry, College of Pharmacy, University of Sharjah (1)
Department of Medicine, University of Cambridge, Cambridge, UK (1)
Director of Proteomics Program, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Denmark and Director of Department of Proteomics and Signal Transduction, Max-Planck-Institute of Biochemistry, Germany (1)
European Molecular Biology Laboratory (EMBL) Meyerhofstr 17 69117 Heidelberg Germany (1)
Harvard Medical School, Systems Biology Department, Boston,MA, 02115 (1)
Indian Council of Medical Research, Regional Medical Research Centre, Dollygunj, Port Blair - 744 103, Andaman & Nicobar Islands,INDIA. Phone: Office: +91-3192-251158 Cell: +91-9434284576 (1)
Institute for Ophthalmic Research University of Tübingen (1)
Laboratory for Functional Genome Analysis Genzentrum Ludwig-Maximilians-Universität München Feodor-Lynen-Str. 25 D-81377 München Germany (1)
Multi-Organ Transplant, and Division of Nephrology, Department of Medicine. University Health Network, Toronto, Ontario, Canada. (1)
Musculoskeletal Development and Regeneration Group, Institute of Chemistry and Biochemistry, Freie Universität Berlin, Berlin, Germany (1)
No. 2 West Yuanmingyuan Road, Haidian District, Beijing (1)
Professor i molekylærbiologi og faglig leder av PROMEC Institutt for kreftforskning og molekylær medisin Fakultet for medisin og helsevitenskap NTNU, Trondheim, Norway (1)

Keyword

Fluorescence angiography (1)
Colic surgery (1)
Rectal surgery (1)
Capecitabin (1)
Debulking, cytoreduction, RFA, SABR, palliative chemotherapy (1)
Multi-omics method (1)
Indocyanine green (1)
Fluorouracil (1)
Fast track (1)
Prevention (1)
Folinic acid (1)
Oxaliplatin (1)
Biomarker (1)
Anastomotic leakage (1)
Irinotecan (1)
Colorectal surgery (1)
Bevacizumab (1)

IsPrivate

False (11)

Submitter Keywords

Manuscript Accepted (1)

Classification

bacteria (2)
protozoa (1)

Modification

Not available (1)

Study type

Transcription profiling by array (1917)
RNA-seq of coding RNA (310)
Unknown experiment type (183)
ChIP-seq (84)
RNA-seq of non coding RNA (55)
RNA-seq of coding RNA from single cells (49)
Comparative genomic hybridization by array (47)
Methylation profiling by high throughput sequencing (46)
Methylation profiling by array (29)
Other (19)
DNA-seq (17)
Animal - High-throughput sequencing (16)
ChIP-chip by tiling array (12)
RNA-seq of total RNA (12)
Transcription profiling by tiling array (11)
Animal - One-color microarray (9)
ChIP-chip by array (9)
Transcription profiling by RT-PCR (9)
MicroRNA profiling by array (9)
Transcription profiling by SAGE (6)
MicroRNA profiling by high throughput sequencing (5)
Cell line - High-throughput sequencing (4)
Bisulfite-seq (4)
Differential (3)
One-color microarray (3)
Cell line - One-color microarray (3)
High-throughput sequencing (3)
Spatial transcriptomics by high-throughput sequencing (3)
CUT&RUN (3)
Human - High-throughput sequencing (2)

Release Date

2025 (576)
2021 (494)
2022 (484)
2023 (417)
2010 (392)
2014 (383)
2020 (366)
2015 (355)
2024 (345)
2013 (302)
2012 (298)
2016 (254)
2011 (254)
2019 (199)
2008 (198)
2018 (171)
2005 (168)
2017 (164)
2009 (158)
2026 (118)
2007 (100)
2006 (74)
2004 (9)
2003 (5)
2002 (5)

Location

China (1)
Netherlands (1)
United States (1)
Australia (1)
United Kingdom (1)
France (1)

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Chemotherapy and Maximal Tumor Debulking of Multi-organ Colorectal Cancer Metastases

The purpose of this study is to compare overall survival rates of colorectal cancer patients with multi-organ metastases with an indication for first line systemic treatment randomized for treatment with combination chemotherapy or treatment with combination chemotherapy and additional maximal tumor...

2140172 | ecrin-mdr-crc

Longitudinal multi-organ transcriptomic atlas of salt-induced hypertension

PRJNA1303696 | ENA

Single cell analysis of MCF7-derived multi-organ metastases

PRJNA961986 | ENA

Inter-organ transmission of hepatocellular senescence induces multi-organ dysfunction through the TGFβ signalling pathway.

PRJNA1093039 | ENA

Inter-organ transmission of hepatocellular senescence induces multi-organ dysfunction through the TGFbeta signalling pathway

PRJNA1110225 | ENA

Multi-organ immunity on a 3D-printed multi-tissue chip with tubing-free impeller pump

PRJNA1114743 | ENA

Generation and characterization of the Arctic charr multi-organ transcriptome

PRJEB9273 | ENA

Predicting Human Clinical Outcomes using Mouse Multi-Organ Transcriptome

PRJNA595856 | ENA

Single-cell RNA-sequencing of multi-organ metastasis in the VO-PyMT mouse model of breast cancer

Metastasis frequently affects multiple organs in stage IV breast cancer patients and is associated with dismal outcomes. The mechanisms enabling cancer cell colonization across diverse anatomical sites remain poorly understood, mainly due to lack of models of systemic disease and of studies in clin...

ORGANISM(S): Mus musculus

2026-07-31 | E-MTAB-16621 | biostudies-arrayexpress

Multi-organ proteomic atlas of obesity regression in male mice

PRJNA1496755 | ENA

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7580 Results

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