Musa acuminata - OmicsDI

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Unknown (183)
Genomics (169)
Transcriptomics (34)
Proteomics (13)
Metabolomics (4)
Other (1)

Organisms

Musa acuminata AAA Group (13)
Musa acuminata (11)
Musa AAB Group (4)
Drosophila mojavensis (3)
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 (3)
Drosophila melanogaster (3)
Solanum lycopersicum (3)
Zea mays (3)
Drosophila pseudoobscura (2)
Zostera marina (2)
Carica papaya (2)
Vitis vinifera (2)
Sorghum bicolor (2)
Drosophila hawaiiensis (1)
Drosophila ficusphila (1)
Musa sp. (1)
Ralstonia pickettii (1)
mixed sample (1)
Musa acuminata subsp. burmannicoides (1)
Fusarium odoratissimum NRRL 54006 (1)
Miscanthus x giganteus (1)
Cucurbita maxima (1)
Cycas rumphii (1)
Marsilea quadrifolia (1)
Aristolochia fimbriata (1)
Chara corallina (1)
Silene latifolia (1)
Amborella trichopoda (1)
Nuphar advena (1)
Fusarium oxysporum f. sp. cubense (1)

Organisms

Musa acuminata (41)
Musa acuminata AAA Group (30)
Musa acuminata subsp. acuminata (12)
Musa acuminata subsp. malaccensis (5)
Musa acuminata var. zebrina (3)
Musa x paradisiaca (2)
Musa acuminata subsp. burmannicoides (2)
Musa balbisiana (2)
Musa ABB Group (1)
Musa acuminata AAAA Group (1)
Fusarium oxysporum f. sp. cubense (1)
endophyte metagenome (1)
Danio rerio (1)
rhizosphere metagenome (1)
Bacillus cereus (1)

Repository

ENA (160)
biostudies-arrayexpress (23)
geo (19)
pride (6)
iProX (4)
EVA (2)
MassIVE (2)
MetaboLights (2)
GNPS (1)
jPOST (1)
MetabolomicsWorkbench (1)

Tissue

Fruit (2)
Cotyledon (2)
Plant cell (2)
Cell suspension culture (2)
Embryo (2)
Cell culture (2)
Plant (1)
Flower bud (1)
Early embryonic cell (1)
Root (1)
Leaf (1)

Technology Type

Mass Spectrometry (7)
Shotgun proteomics (4)
Gel-based experiment (2)
Mass spectrometry assay (1)
Mass spectrometry (1)
ESI (1)

Instrument Platform

MicrOTOF-Q III (2)
Illumina Genome Analyzer (1)
Illumina Genome Analyzer II (1)
Illumina NovaSeq 6000 (1)
Illumina HiSeq X Ten (1)
- (1)
TripleTOF 6600 (1)
LECO Pegasus 4D GCxGC-TOF-MS (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Liquid Chromatography MS - negative - reverse-phase (1)

Publication Date

2015 (6)
2010 (6)
2018 (6)
2013 (5)
2020 (5)
2011 (4)
2019 (4)
2021 (3)
2016 (3)
2014 (3)
2012 (2)
2005 (2)
2024 (2)
2026 (2)
2022 (2)
2009 (1)
2023 (1)

CHEBI ID

CHEBI:87266 (1)
CHEBI:87267 (1)
CHEBI:87268 (1)
CHEBI:87269 (1)
CHEBI:87270 (1)
CHEBI:87273 (1)
CHEBI:87713 (1)
CHEBI:87275 (1)
CHEBI:87276 (1)
CHEBI:87278 (1)
CHEBI:87776 (1)
CHEBI:87280 (1)
CHEBI:87282 (1)
CHEBI:87286 (1)
CHEBI:87288 (1)
CHEBI:87290 (1)
CHEBI:87291 (1)
CHEBI:87292 (1)
CHEBI:87294 (1)
CHEBI:87296 (1)
CHEBI:87297 (1)
CHEBI:87298 (1)
CHEBI:10334 (1)
CHEBI:35290 (1)
CHEBI:87304 (1)
CHEBI:87308 (1)
CHEBI:87309 (1)
CHEBI:87310 (1)
CHEBI:87311 (1)
CHEBI:87312 (1)

Metabolite Name

5-chlorooctylacetate (1)
(2E)-1,4-dimethoxybut-2-en-1-yl acetate (1)
2-(carboxyethoxy)-propanal (1)
2-(3-pyridyl)-3-(4-toluenesulfonamido)propylazetidine (1)
2-(1-pentyloxy)-ethyl acetate (1)
1-ethoxy-1-pentoxyethane (1)
1-(2-phenethyl)imidazolidine-2,4,5-trione (1)
(trans)-3,4-oxa-2,5-dimethylhexane (1)
(RS)-3-methyl-4-{[(Z)-prop-1-enyl]oxy}butanal (1)
Ethyl 3-methylbutyl butanedioate (1)
Ethyl 2-phenylethyl dimethylmalonate (1)
Isobutyl 2-phenylethyl 2,6-pyridinedicarboxylate (1)
2-methylbutyl acetoxyacetate (1)
3-(methylthio)propyl acetate (1)
Ethyl 4-oxobutanoate (1)
1-methoxy-2-ethoxyethyl-1-furan (1)
3-ethyl-1,5-octadiene (1)
(1-methylbutyl)cyclopentane (1)
Butyl 9-decenoate (1)
3,3-dimethoxy-1-phenyl-1,2-propanedione (1)
3-ethoxypropyl acetate (1)
Diethyl 2-hydroxypentanedioate (1)
4-(1-hydroxyethyl)-gamma-butanolactone (1)
Se-butyl butanecarboselenoate (1)
1, 1, 5-trimethyl-1, 2-dihydronaphthalene (1)
Ethyl hex-5-enoate (1)
Alpha-terpinene (1)
Gamma-terpinene (1)
2-furaldehyde (1)
Ethyl lactate (1)

First Public Date

2024 (22)
2023 (22)
2013 (22)
2020 (14)
2026 (13)
2025 (13)
2019 (9)
2017 (9)
2016 (9)
2021 (6)
2015 (6)
2022 (5)
2018 (5)
2014 (4)
2012 (1)

Classification

fungi (1)
bacteria (1)

Study type

Transcription profiling by array (8)
RNA-seq of coding RNA (6)
RNA-seq of non coding RNA (4)
Transcription profiling by SAGE (1)
Unknown experiment type (1)
Comparative genomic hybridization by array (1)
Other (1)
ChIP-seq (1)

Release Date

2023 (22)
2020 (20)
2022 (19)
2024 (17)
2021 (16)
2016 (15)
2019 (15)
2025 (14)
2013 (13)
2015 (9)
2018 (9)
2017 (9)
2010 (8)
2014 (6)
2011 (4)
2012 (3)
2026 (3)
2009 (1)
2005 (1)
2008 (1)
2007 (1)

Lab affiliation

SYBIOMA KULeuven (2)
Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization, Ministry of Agriculture, Guangzhou, China. (1)
Director, National Research Centre for Banana, Trichy, Tamil Nadu, India (1)
Dr.S. UMA Director, National Research Centre for Banana Trichy, Tamil Nadu, India (1)
Laboratory of Tropical Crop Improvement, Division of Crop Biotechnics, KU Leuven, B-3001, Leuven, Belgium FAcility for System Biology based Mass Spectrometry (SYBIOMA), KU Leuven, B-3001, Leuven, Belgium (1)

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leaf_greenhouse

SuperSAGE was applied in the non-model organism banana (Musa acuminata) one leaf sample was analysed, no replicates were included

ORGANISM(S): Musa acuminata

2005-06-15 | E-GEOD-2811 | biostudies-arrayexpress

Heterologous microarrays for the study of drought stress in Musa

'Systems-wide' approaches such as microarray RNA-profiling are ideally suited to the study of the complex, overlapping responses of plants to biotic and abiotic stresses. However, commercial microarrays are only available for a limited number of plant species and development costs are so substantial...

ORGANISM(S): Musa sp.

2009-07-04 | E-GEOD-16865 | biostudies-arrayexpress

High-throughput sequencing of small RNAs in Musa acuminata

Small RNAs (21-24 nt) are pivotal regulators of gene expression that guide both transcriptional and post-transcriptional silencing mechanisms in diverse eukaryotes, including most if not all plants. MicroRNAs (miRNAs) and short interfering RNAs (siRNAs) are the two major types, both of which have a ...

ORGANISM(S): Musa acuminata

2011-05-09 | E-GEOD-28972 | biostudies-arrayexpress

Genome Sequencing and Comparative Transcriptomics of Race1 and Race4 of Banana pathogen: Fusarium oxysporum f.sp. Cubense

Deep sequencing of mRNA from Fusarium oxysporum f. sp. Cubense 1 and 4 after infecting Musa acuminata 0h and 48h. Analysis of ploy(A)+ RNA of different hours after infecting of Musa acuminata

ORGANISM(S): Fusarium oxysporum f. cubense

2014-08-27 | E-GEOD-40581 | biostudies-arrayexpress

Musa acuminata

Musa acuminata alternate pseudohaplotype genome sequencing

PRJNA868162 | ENA

Musa acuminata

Musa acuminata principal pseudohaplotype genome sequencing

PRJNA868163 | ENA

Musa acuminata strain:Calcutta-4

Musa acuminata strain:Calcutta-4 Genome sequencing

PRJNA15720 | ENA

Musa acuminata