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TranscriptomicsSpecific growth rate dependent transcriptome profiling of Escherichia coli K12 MG1655 in accelerostat cultures
Specific growth rate dependent gene expression changes of Escherichia coli K12 MG1655 were determined by microarray and real time PCR analyses. The bacteria were cultivated on glucose limited minimal medium using the accelerostat method (A-stat), where starting from steady state conditions in a chem...
ORGANISM(S): Escherichia coli 
2010-05-22 | E-GEOD-18183 | biostudies-arrayexpress
TranscriptomicsMulti-omics approach to study the growth efficiency and amino acid metabolism in Lactococcus lactis at various specific growth rates
Background Lactococcus lactis is recognised as a safe (GRAS) microorganism and has hence gained interest in numerous biotechnological approaches. As it is fastidious for several amino acids, optimization of processes which involve this organism requires a thorough understanding of its metabolic reg...
ORGANISM(S): Lactococcus lactis subsp. lactis Il1403 
2011-01-11 | E-GEOD-26536 | biostudies-arrayexpress
TranscriptomicsSystems biology approach reveals that overflow metabolism of acetate in Escherichia coli is triggered by carbon catabolite repression of acetyl-CoA synthetase
Background: The biotechnology industry has extensively exploited Escherichia coli for producing recombinant proteins, biofuels etc. However, high growth rate aerobic E. coli cultivations are accompanied by acetate excretion i.e. overflow metabolism which is harmful as it inhibits growth, diverts val...
ORGANISM(S): Escherichia coli str. K-12 substr. MG1655 
2010-09-02 | E-GEOD-23920 | biostudies-arrayexpress
OtherProteome reallocation in Escherichia coli with increasing specific growth rate
Data from ProteomeXchange, PXD ID: PXD001594. File: 130326_01_Orbi1_SK_SER_G250_T295_Piimhappe_BT_projekt_proov_F201_S2_P9.mzml. Published as part of Mol Biosyst. 2015 Feb 25 . From ProteomeXchange: {{i}} E. coli was grown on minimal and defined rich media in steady state continuous cultures at dif...
ORGANISM(S): Enterobacteria_phage_13a_uid30603, Enterobacteria_phage_933w_uid14043, Enterobacteria_phage_alpha3_uid14570, Enterobacteria_phage_ba14_uid30599, Enterobacteria_phage_bp_4795_uid14287, Enterobacteria_phage_bz13_uid14635, Enterobacteria_phage_cdti_uid19737, Enterobacteria_phage_ecods1_uid30601, Enterobacteria_phage_eps7_uid29287, Enterobacteria_phage_epsilon15_uid14285, Enterobacteria_phage_es18_uid15174, Enterobacteria_phage_felix_01_uid14323, Enterobacteria_phage_fels_2_uid32273, Enterobacteria_phage_fi_sensu_lato_uid15459, Enterobacteria_phage_g4_sensu_lato_uid14318, Enterobacteria_phage_hk022_uid14048, Enterobacteria_phage_hk620_uid14115, Enterobacteria_phage_hk97_uid14592, Enterobacteria_phage_i2_2_uid14572, Enterobacteria_phage_id18_sensu_lato_uid16628, Enterobacteria_phage_id2_moscow_id_2001_uid16591, Enterobacteria_phage_if1_uid14039, Enterobacteria_phage_ike_uid14627, Enterobacteria_phage_ime08_uid50177, Enterobacteria_phage_jk06_uid15569, Enterobacteria_phage_js10_uid38265, Enterobacteria_phage_js98_uid27983, Enterobacteria_phage_jse_uid38263, Enterobacteria_phage_k1e_uid16228, Enterobacteria_phage_k1f_uid15880, Enterobacteria_phage_k1_5_uid17059, Enterobacteria_phage_lambda_uid14204, Enterobacteria_phage_m13_uid14549, Enterobacteria_phage_min27_uid29143, Enterobacteria_phage_ms2_uid14659, Enterobacteria_phage_mu_uid14105, Enterobacteria_phage_n15_uid14086, Enterobacteria_phage_n4_uid18511, Enterobacteria_phage_p1_uid14493, Enterobacteria_phage_p22_uid14478, Enterobacteria_phage_p2_uid14035, Enterobacteria_phage_p4_uid14414, Enterobacteria_phage_phi1_uid20789, Enterobacteria_phage_phieco32_uid28729, Enterobacteria_phage_phiecom_gj1_uid27979, Enterobacteria_phage_phip27_uid14599, Enterobacteria_phage_phiv10_uid16381, Enterobacteria_phage_phix174_sensu_lato_uid14015, Enterobacteria_phage_prd1_uid14062, Enterobacteria_phage_psp3_uid14345, Enterobacteria_phage_rb14_uid37825, Enterobacteria_phage_rb16_uid51699, Enterobacteria_phage_rb32_uid17997, Enterobacteria_phage_rb43_uid15417, Enterobacteria_phage_rb49_uid14301, Enterobacteria_phage_rb51_uid37819, Enterobacteria_phage_rb69_uid15141, Enterobacteria_phage_rtp_uid16178, Enterobacteria_phage_sf6_uid14498, Enterobacteria_phage_sfv_uid14162, Enterobacteria_phage_sp6_uid14291, Enterobacteria_phage_ssl_2009a_uid34919, Enterobacteria_phage_st104_uid14499, Enterobacteria_phage_st64t_uid14230, Enterobacteria_phage_st_1_uid38669, Enterobacteria_phage_t1_uid14496, Enterobacteria_phage_t3_uid14336, Enterobacteria_phage_t4_uid14044, Enterobacteria_phage_t5_uid15143, Enterobacteria_phage_t7_uid14460, Enterobacteria_phage_tls_uid19775, Enterobacteria_phage_vt2_sakai_uid14480, Enterobacteria_phage_wa13_sensu_lato_uid16595, Enterobacteria_phage_wv8_uid38281, Enterobacteria_phage_yyz_2008_uid32231, Enterobacteriophage_qbeta_uid15479, Escherichia_coli_k_12_substr__dh10b, Escherichia_coli_k_12_substr__mg1655 
GPM32320007851 | GPMDB
Resource Reanalysis 
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