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Unknown
(735)
Genomics
(203)
Transcriptomics
(155)
Metabolomics
(2)
Proteomics
(1)
Organisms
Homo sapiens
(130)
Mus musculus
(40)
Danio rerio
(11)
Canis lupus familiaris
(6)
Daphnia magna
(3)
Sus scrofa
(3)
Raphidocelis subcapitata
(2)
Equus caballus
(2)
Medicago truncatula
(2)
Caenorhabditis elegans
(2)
Gallus gallus
(2)
Escherichia coli str. K-12 substr. MG1655
(2)
Rattus norvegicus
(2)
Triticum turgidum
(1)
Lemna minor
(1)
Halomonas sp.
(1)
x Triticosecale sp.
(1)
Bacteroides phage p00
(1)
human oral metagenome
(1)
human gut metagenome
(1)
Beijerinckiaceae bacterium
(1)
Chenopodium quinoa
(1)
Fragaria x ananassa
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Phaeodactylum tricornutum
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Lolium perenne
(1)
Rubus idaeus
(1)
Felis catus
(1)
mixed sample
(1)
Phleum pratense
(1)
Salmonella enterica subsp. enterica serovar Typhimurium
(1)
Organisms
Flavobacteriales bacterium
(3)
Cytophagales bacterium
(3)
Thermosynechococcus sp. 'klein barmen'
(2)
Verrucomicrobiota bacterium
(2)
Bucorvus leadbeateri
(2)
bacterium
(2)
Homo sapiens
(2)
Thunnus
(1)
Leishmania sp. Namibia
(1)
Candidatus Thioglobus sp. SCGC AG-485_P20
(1)
Candidatus Thioglobus sp. SCGC AG-485_P16
(1)
Candidatus Thioglobus sp. SCGC AG-485_P15
(1)
Candidatus Thioglobus sp. SCGC AG-485_P13
(1)
Candidatus Thioglobus sp. SCGC AG-485_N09
(1)
Candidatus Thioglobus sp. SCGC AG-485_M02
(1)
Candidatus Thioglobus sp. SCGC AG-485_L02
(1)
Candidatus Thioglobus sp. SCGC AG-485_K06
(1)
Candidatus Thioglobus sp. SCGC AG-485_J18
(1)
Candidatus Thioglobus sp. SCGC AG-485_J04
(1)
Candidatus Thioglobus sp. SCGC AG-485_F18
(1)
Nitrosopumilus sp. SCGC AG-485_G10
(1)
Nitrosopumilus sp. SCGC AG-485_D14
(1)
Candidatus Thioglobus sp. SCGC AG-485_F15
(1)
Candidatus Thioglobus sp. SCGC AG-485_F11
(1)
Candidatus Thioglobus sp. SCGC AG-485_C22
(1)
Candidatus Thioglobus sp. SCGC AG-485_B10
(1)
Candidatus Thioglobus sp. SCGC AG-485_A21
(1)
Candidatus Thioglobus sp. SCGC AG-485_A16
(1)
Candidatus Thioglobus sp. SCGC AG-485_A09
(1)
Candidatus Thioglobus sp. SCGC AG-485_K15
(1)
Repository
biostudies-arrayexpress
(168)
ENA
(129)
EGA
(61)
MetaboLights
(2)
pride
(1)
Tissue
Bone
(1)
Tooth
(1)
Technology Type
Illumina MiSeq, ILLUMINA
(1)
Illumina HumanMethylation450
(1)
Illumina
(1)
Illumina HiSeq 2000
(1)
Mass spectrometry assay
(1)
Mass spectrometry
(1)
Mass Spectrometry
(1)
Shotgun proteomics
(1)
Instrument Platform
Illumina NovaSeq 6000
(66)
NextSeq 2000
(22)
NextSeq 500
(17)
Illumina HiSeq 4000
(11)
Illumina HiSeq 2500
(10)
NextSeq 550
(8)
Dell PowerEdge R750; CPU: 2 × Intel Xeon Gold 6346 (32 Cores / 64 Threads); RAM: 188 GB
(6)
NucleoSpin RNA/Protein kit lysis buffer (350 µL per tube; Macherey‑Nagel).
(5)
See manuscript
(4)
Illumina NovaSeq X
(4)
None
(4)
-
(4)
Illumina MiSeq
(4)
FastPrep‑24 homogenizer (MP Biomedicals)
(3)
Illumina HiSeq 2000
(3)
DELL PRECISION 7500
(2)
Tru-cut biopsy needle (Marquee®, 16 G × 10 cm)
(2)
Shanghai Genefund Biotech Co., Ltd Illumina NovaSeq 6000
(2)
BD Rhapsody
(2)
FastPrep‑24 homogenizer (MP Biomedicals), operated at 5 m/s for 10 seconds.
(2)
.
(2)
Not applicable
(2)
NextSeq 1000
(2)
TruSeq RNA Sample Prep Kit
(2)
Illumina HiSeq X
(2)
Dell PRECISION T7500
(1)
MethylationEPIC BeadChip (Illumina, San Diego, CA, USA)
(1)
DELL PRICISION T7500
(1)
Illumina NOVAseq 6000
(1)
NanoDrop 2000 Spectrophotometer, Agilent 2100 Bioanalyzer
(1)
Publication Date
2025
(82)
2026
(80)
2015
(2)
2014
(2)
2023
(1)
2016
(1)
2006
(1)
2017
(1)
2020
(1)
CHEBI ID
CHEBI:18422
(1)
CHEBI:28660
(1)
CHEBI:36693
(1)
CHEBI:87276
(1)
CHEBI:87338
(1)
CHEBI:63910
(1)
CHEBI:87489
(1)
CHEBI:87514
(1)
CHEBI:44884
(1)
CHEBI:140673
(1)
CHEBI:76923
(1)
CHEBI:78373
(1)
CHEBI:140672
(1)
CHEBI:50540
(1)
CHEBI:22998
(1)
CHEBI:140671
(1)
CHEBI:140670
(1)
CHEBI:31033
(1)
CHEBI:38818
(1)
CHEBI:18417
(1)
CHEBI:18418
(1)
CHEBI:16011
(1)
CHEBI:17209
(1)
CHEBI:17390
(1)
CHEBI:18285
(1)
CHEBI:173693
(1)
CHEBI:444
(1)
CHEBI:87501
(1)
CHEBI:180411
(1)
CHEBI:156074
(1)
Metabolite Name
Ethyl isopentyl succinate
(1)
3-Nonen-1-ol
(1)
Ethyl methyl butanedioate
(1)
Oxolan-2-one
(1)
Ethyl 2-hydroxycaproate
(1)
Isoamyl hexanoate
(1)
1,3-Dichloro-benzene
(1)
3-Ethoxy-1-propanol
(1)
Ethyl 3-hexenoate
(1)
Isopentyl 3-methylbutyrate
(1)
Ethyl 3-methylbutyrate
(1)
Methyl thiolacetate
(1)
Ethyl propanoate
(1)
Sulfur dioxide
(1)
Beta-Linalool
(1)
Ethyl 2-furoate
(1)
2-Methyl-1-butanol
(1)
Ethyl 9-decenoate
(1)
2-Ethyl-1-hexanol
(1)
Ethyl 2-hexenoate
(1)
Ethyl heptanoate
(1)
4-Methyl-1-pentanol
(1)
Ethyl isobutyrate
(1)
Alpha-Pinene
(1)
3-(methylthio)-1-propanol
(1)
1-nonanol
(1)
Isoamyl propionate
(1)
Trans-3-Hexen-1-ol
(1)
Isobutyl alcohol
(1)
Isobutyl acetate
(1)
First Public Date
2023
(41)
2019
(18)
2026
(11)
2020
(11)
2024
(10)
2021
(8)
2018
(8)
2025
(7)
2015
(4)
2016
(3)
2013
(3)
2022
(2)
2017
(2)
2014
(1)
Classification
bacteria
(3)
protozoa
(1)
Study type
RNA-seq of coding RNA
(86)
RNA-seq of coding RNA from single cells
(22)
RNA-seq of total RNA
(16)
DNA-seq
(10)
Methylation profiling by array
(7)
Transcription profiling by array
(6)
Bisulfite-seq
(3)
ATAC-seq
(3)
ChIP-seq
(3)
RNA-seq of non coding RNA
(3)
Spatial transcriptomics by high-throughput sequencing
(2)
RIP-seq
(2)
Unknown experiment type
(1)
Genotyping by array
(1)
MicroRNA profiling by high throughput sequencing
(1)
Hi-C
(1)
Single nucleus RNA sequencing
(1)
Release Date
2025
(158)
2022
(103)
2021
(92)
2026
(91)
2023
(91)
2024
(65)
2020
(65)
2019
(38)
2018
(37)
2015
(32)
2017
(29)
2014
(28)
2016
(26)
2013
(14)
2012
(12)
2006
(6)
2011
(5)
2008
(4)
2010
(3)
2009
(2)
2005
(2)
Lab affiliation
Museum national d'Histoire naturelle UMR 7245 MCAM 43 rue Cuvier CP 54 F-75005 Paris FRANCE
(1)
Tags
pathogen
(4)
pathogen:bacterium
(3)
xref:PubMed:42012298
(1)
xref:PubMed:34292068
(1)
xref:PubMed:16621833
(1)
xref:PubMed:15808746
(1)
wastewater
(1)
covid19
(1)
pathogen:protozoan
(1)
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Coxiella burnetii str. Namibia
Coxiella burnetii str. Namibia Genome sequencing
PRJNA197124
|
ENA
Cite
Mycotoxin exposure through the consumption of processed cereal food for children (< 5 years old) from rural households of Oshana, a region of Namibia.
Not available
S-EPMC11759469
|
biostudies-literature
Cite
Loop-mediated isothermal amplification (LAMP) and Polymerase Chain Reaction (PCR) as quality assurance tools for Rapid Diagnostic Test (RDT) malaria diagnosis in Northern Namibia.
Not available
S-EPMC6291133
|
biostudies-literature
Cite
Molecular characterization of avipoxviruses circulating in Windhoek district, Namibia 2021.
Not available
S-EPMC9177402
|
biostudies-literature
Cite
Nutritional status of children under 5 years old in Namibia: adjusting for poor quality child anthropometry.
Not available
S-EPMC9389280
|
biostudies-literature
Cite
Antimicrobial resistance among bacteria isolated from urinary tract infections in females in Namibia, 2016-2017.
Not available
S-EPMC8840701
|
biostudies-literature
Cite
Leopard Density Estimation within an Enclosed Reserve, Namibia Using Spatially Explicit Capture-Recapture Models.
Not available
S-EPMC6826368
|
biostudies-literature
Cite
Highly pathogenic avian influenza H5N1 virus outbreak among Cape cormorants (
Phalacrocorax capensis
) in Namibia, 2022.
Not available
S-EPMC9980411
|
biostudies-literature
Cite
Molecular detection of P. vivax and P. ovale foci of infection in asymptomatic and symptomatic children in Northern Namibia.
Not available
S-EPMC6513099
|
biostudies-literature
Cite
Genetic Diversity of Rift Valley Fever Strains Circulating in Namibia in 2010 and 2011.
Not available
S-EPMC7765780
|
biostudies-literature
Cite
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