Nap protein - OmicsDI

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Transcriptomics (920)
Unknown (275)
Genomics (149)
Proteomics (69)
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Models (1)
Multiomics (1)

Organisms

Homo sapiens (540)
Mus musculus (288)
Drosophila melanogaster (28)
Caenorhabditis elegans (19)
Saccharomyces cerevisiae (17)
Arabidopsis thaliana (14)
Rattus norvegicus (13)
Bos taurus (11)
Sus scrofa (10)
Pseudomonas aeruginosa (8)
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Schizosaccharomyces pombe (5)
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Schmidtea mediterranea (3)
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Trypanosoma brucei (3)
Helicobacter pylori (3)
Canis lupus familiaris (3)
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Organisms

Pseudomonas putida (2)
Mycobacterium tuberculosis H37Rv (1)
Escherichia coli K-12 (1)
Escherichia coli str. K-12 substr. MG1655 (1)
Schizosaccharomyces pombe (1)
Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 (1)
Saccharomyces cerevisiae (1)
Drosophila melanogaster (1)
Pseudomonas aeruginosa (1)
Arabidopsis thaliana (1)
Mus musculus (1)
Homo sapiens (1)

Repository

biostudies-arrayexpress (1030)
pride (34)
MassIVE (23)
MetaboLights (23)
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ENA (17)
geo (14)
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jPOST (3)
GPMDB (2)
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Tissue

Cell culture (10)
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HeLa cell (3)
Plant cell (3)
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Brain (2)
Root (2)
Blood (1)
Blood cell (1)
Blood serum (1)
Cell suspension culture (1)
Early embryonic cell (1)
HEK-293FT cell (1)
Leaf (1)
Neuroblast (sensu Nematoda and Protostomia) (1)
Permanent cell line cell (1)
Rosette (1)
Stem cell (1)

Disease

Listeriosis (3)
Wilms tumour (2)
Normal (2)
Not Available (2)
Adenocaricinoma (1)
XCGD (1)
Lymphoblastic leukemia (1)
Multiple myeloma TC3 (1)
HIV-associated dementia (1)
B-precursor acute lymphoblastic leukemia (1)
Mantle cell lymphoma (1)
Prostate carcinoma lymph node metastasis (1)
Infant Acute Lymphoblastic Leukaemia (1)
Rheumatoid Arthritis (1)
Myeloid neoplasm (1)
Myelogenous leukaemia (1)
Precursor T lymphoblastic leukemia (1)
No tendon xanthomas (1)
Chronic infection with geohelminth ascaris lumbricoides (1)
Acute monoblastic leukaemia (1)
T-cell acute lymphoblastic leukemia (1)
Mixoid liposarcoma (1)
S enteritidis (1)
Prostate carcinoma (1)
Cervix carcinoma (1)
Congenital heart disease (1)
Limbic encephalitis (1)
Temporal lobe epilepsy (1)

Technology Type

Mass Spectrometry (34)
Shotgun proteomics (21)
Mass spectrometry (16)
Mass spectrometry assay (5)
Bottom-up proteomics (5)
NMR spectroscopy (2)
Affinity purification coupled with mass spectrometry proteomics (2)
Data-dependent acquisition (2)
Top-down proteomics (2)
Illumina HiSeq 2000, Affymetrics_SNP_6.0-, Illumina Genome Analyzer IIx (1)
Illumina HiSeq 2000 (1)
Illumina MiSeq (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Data-independent acquisition (1)
Gel-based experiment (1)
SWATH MS (1)

Instrument Platform

Illumina NovaSeq 6000 (22)
Illumina HiSeq 2000 (21)
Illumina HiSeq 2500 (17)
Illumina HiSeq 4000 (10)
NextSeq 500 (9)
Axon- GenePix4000B (5)
Illumina MiSeq (5)
ScanArray [PerkinElmer] (4)
NextSeq 550 (4)
ScanArray 6000 [Perkin Elmer] (2)
Illumina HiSeq X (2)
NextSeq 2000 (2)
Illumina HiSeq 2000 platform (1)
DNBelab C Series High-throughput Single-cell RNA Library Preparation Set V3.0 (MGI Tech) (1)
DNBelab C-TaiM droplet generator (MGI Tech) (1)
Avatarget 12-well dual-chamber organ-on-chip system; AvatarFlow Organ Chip Flow Initiation Controller System (Avatarget Co., Ltd., Suzhou, China) (1)
10x Chromium with a target of 5,000 cells. Chromium Single Cell 3’ Library & Gel Bead Kit v2 (1)
10X Genomics reagent kit (1)
Model-G2505B US23502366 (1)
Computater Servers UPPMAX-SNIC. (1)
Illumina Tru-seq RNA (1)
NanoDrop spectrophotometer (NanoDrop Technologies, Wilmington, DE) (1)
Dynamic light scattering and zeta potential. The experiments were performed on a Malvern Zetasizer NanoZS instrument using a He-Ne laser (Max, 5 mW) at 633 nm. (1)
AB SOLiD 4 System (1)
Other (1)
Illumina Genome Analyzer IIx (1)
Illumina Genome Analyzer II (1)
Illumina NovaSeq X (1)
NA (1)
Illumina MiniSeq (1)

Publication Date

2013 (132)
2012 (120)
2014 (118)
2011 (107)
2015 (106)
2010 (94)
2016 (90)
2008 (75)
2009 (46)
2023 (24)
2021 (23)
2007 (23)
2024 (22)
2025 (20)
2017 (20)
2022 (18)
2020 (18)
2026 (17)
2018 (16)
2005 (16)
2019 (12)
2006 (7)
2004 (4)
2003 (1)

CHEBI ID

CHEBI:16359 (5)
CHEBI:35038 (4)
CHEBI:16811 (4)
CHEBI:25017 (4)
CHEBI:15741 (4)
CHEBI:15428 (4)
CHEBI:17368 (4)
CHEBI:64032 (3)
CHEBI:16755 (3)
CHEBI:17822 (3)
CHEBI:18186 (3)
CHEBI:17234 (3)
CHEBI:73858 (3)
CHEBI:28044 (3)
CHEBI:116314 (3)
CHEBI:27266 (3)
CHEBI:16704 (3)
CHEBI:16857 (3)
CHEBI:75342 (3)
CHEBI:64489 (3)
CHEBI:15891 (3)
CHEBI:27997 (3)
CHEBI:25094 (3)
CHEBI:18237 (3)
CHEBI:16449 (3)
CHEBI:30915 (3)
CHEBI:16199 (3)
CHEBI:18127 (3)
CHEBI:15724 (3)
CHEBI:15354 (3)

Metabolite Name

Cholic acid (5)
Spermidine (4)
Guanine (4)
Tris(2-butoxyethyl) phosphate (3)
1-Myristoyl-sn-glycero-3-phosphocholine (3)
Linoleoyl ethanolamide (3)
Betaine (3)
1-Stearoyl-2-hydroxy-sn-glycero-3-phosphocholine (3)
Phosphocholine (3)
L-Histidine (3)
Indole (3)
Methionine (3)
Choline (3)
Tauroursodeoxycholic acid (3)
Niacinamide (3)
Adenosine (3)
Riboflavin (3)
Adenine (3)
L-Carnitine (3)
Inosine (3)
Hypoxanthine (3)
(2S,3S,4S,5R,6R)-6-[[(3S,4S,6aR,6bS,8aR,9R,12aS,14bR)-9-hydroxy-4-(hydroxymethyl)-4,6a,6b,8a,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-5-[(2S,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxyoxane-2-carboxylic acid (2)
PyroGlu-Pro (2)
Acetyl-DL-carnitine (2)
Dibutyl phthalate (DBP) (2)
1-Hexadecyl-sn-glycero-3-phosphocholine (2)
Lyso-PC(16:0) (2)
NCGC00385123-01_C22H30O6_7b,9-Dihydroxy-3-(hydroxymethyl)-1,1,6,8-tetramethyl-5-oxo-1,1a,1b,4,4a,5,7a,7b,8,9-decahydro-9aH-cyclopropa[3,4]benzo[1,2-e]azulen-9a-yl acetate (2)
Alpha-linolenic acid|linolenic acid|(9Z,12Z,15Z)-octadeca-9,12,15-trienoic acid (2)
1-({[2-(2-furylmethyl)-5-methylpyrrolidinyl]amino}methylene)-7-[8-({[2-(2-fury lmethyl)pyrrolidinyl]amino}methylene)-1,6-dihydroxy-3-methyl-5-(methylethyl)-7 -oxo(2-naphthyl)]-3,8-dihydroxy-6-methyl-4-(methylethyl)naphthalen-2-one (2)

First Public Date

2025 (3)
2024 (3)
2018 (3)
2021 (2)
2017 (2)
2014 (2)
2020 (1)
2016 (1)

Classification

bacteria (4)

Modification

+3amu) (1)
-17.026549 (1)
15.994915 (1)
32.056407 (1)
4-tetrahydrothiazine-3-carboxylic acid (1)
42.010565 (1)
45.029395 (1)

Study type

Transcription profiling by array (642)
RNA-seq of coding RNA (97)
ChIP-seq (92)
ChIP-chip by tiling array (23)
Unknown experiment type (22)
RNA-seq of coding RNA from single cells (20)
Methylation profiling by array (18)
Comparative genomic hybridization by array (16)
Methylation profiling by high throughput sequencing (15)
Other (14)
ChIP-chip by array (9)
RNA-seq of non coding RNA (8)
DNA-seq (5)
Proteomic profiling by array (5)
Transcription profiling by tiling array (4)
Transcription profiling by RT-PCR (4)
Cell line - High-throughput sequencing (3)
MicroRNA profiling by array (3)
Animal - One-color microarray (2)
CLIP-Seq (2)
RNAi profiling by array (2)
Genotyping by array (2)
MicroRNA profiling by high throughput sequencing (2)
CUT&RUN (2)
ChIP-chip by SNP array (1)
Transcription profiling by SAGE (1)
Cell line - Methylation microarray (1)
MNase-seq (1)
RNA-seq of non coding RNA from single cells (1)
Human - Single-cell sequencing (1)

Release Date

2013 (131)
2012 (130)
2015 (126)
2014 (122)
2011 (114)
2010 (96)
2016 (95)
2008 (77)
2009 (52)
2021 (43)
2022 (37)
2020 (36)
2025 (31)
2017 (31)
2019 (30)
2007 (26)
2024 (25)
2023 (25)
2005 (20)
2018 (19)
2026 (14)
2006 (10)
2004 (8)
1999 (2)
1997 (2)
2003 (1)
2002 (1)
2000 (1)

Lab affiliation

Institut Pasteur Unité des Interactions Bactéries-Cellules, Inserm U604, INRA USC2020 25 rue du Dr. Roux 75015 Paris France (2)
1 Department of Genetics, Harvard Medical School, Boston, MA 02115 (1)
1. Bioanalytics, Institute of Biotechnology, Technische Universität Berlin, 13355 Berlin, Germany 2. Wellcome Centre for Cell Biology, School of Biological Sciences, University of Edinburgh, Edinburgh EH93BF, United Kingdom ( lab head ) (1)
Advanced Water Management Centre, The University of Queensland (1)
Biological mass spectrometry and proteomics group, Department of Chemistry High-resolution mass spectrometry platform, Core research facilities Guangdong provincial key laboratory for cell microenvironment and disease research Southern University of Science and Technology (SUSTech) 403, 1st research building, 1088 Xueyuan Rd., Nanshan, Shenzhen (1)
Boston College (1)
Centre Médical Universitaire Dpt of Cell Physiology and Metabolism 1 rue Michel Servet CH 1211 Geneva 4, Switzerland (1)
Department of Biomedical Sciences, unit of Diagnostic Bacteriology, Institute of Tropical Medicine (1)
Department of Chemistry, Boston College, Chestnut Hill, Massachusetts, USA (1)
Department of Chemistry, University of California, Riverside (1)
Department of Chemistry, University of North Carolina at Chapel Hill (1)
Department of Life Science and Technology, Graduate School of Life Science and Technology Institute of Science Tokyo (1)
Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium VIB Center for Plant Systems Biology, 9052 Ghent, Belgium (1)
Department of Plant Systems Biology, VIB, 9052 Ghent, Belgium Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium (1)
Faculty of Chemistry, Biotechnology and Food Science Norwegian University of Life Sciences Post Office Box 5003 1432, Ås Norway (1)
Ghent University Department of Biochemistry B-9000 Ghent Belgium (1)
Ghent University VIB (1)
Group leader Functional Phosphoproteomics VIB-UGent Center for Plant Systems Biology Ghent University Technologiepark-Zwijnaarde 71 - 9052 Ghent - Belgium www.psb.ugent.be (1)
Head of Proteomics & Metabolomics Facility (1)
Inserm UNIS UMR_S 1072 51 Boulevard Pierre Dramard 13015 Marseille FRANCE (1)
Institut Pasteur, Unité des Interactions Bactéries-Cellules, Inserm U604, INRA USC2020 25 rue du Dr. Roux 75015 Paris, France (1)
Jožef Stefan Institute, Department of Biochemistry and Molecular and Structural Biology, Jamova cesta 39, 1000 Ljubljana, Slovenia Centre of Excellence for Integrated Approaches in Chemistry and Biology of Proteins (CIPKeBiP), Jamova cesta 39, 1000 Ljubljana, Slovenia (1)
Laboratory of Protein Mass Spectrometry (1)
Laboratory of Protein Mass Spectrometry, Faculty of Biotechnology, University of Wroclaw, Poland (1)
Max Planck Insitute for Terrestrial Microbiology Karl-von-Frisch Str. 10 35043 Marburg Germany (1)
New York University (1)
North Carolina State University (1)
UCL - de Duve Institute Brussels Belgium (1)
VIB Center for Medical Biotechnology, VIB, Ghent Department of Biomolecular Medicine, Ghent University,Ghent (1)
VIB Center for Medical Biotechnology, VIB, Ghent Department of Biomolecular Medicine, Ghent University, Ghent (1)

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1H NMR metabolomic and transcriptomic analyses reveal urinary metabolites as biomarker candidates in response to protein undernutrition in adult rats

BACKGROUND: Protein undernutrition is prevalent mainly among elderly people, and it could develop diseases such as sarcopenia. Urinary metabolites may become biomarkers reflecting protein undernutrition, but this has been insufficiently investigated.

OBJECTIVE:

2021-05-27 | MTBLS1452 | MetaboLights

Nucleosome assembly protein-1 (NAP-1) is regulator of histone H1 acetylation

PRJNA668308 | ENA

NAP provides neuroprotection against kainic acid-induced cell death

NAP - neuroprotective peptide demonstrates increase in neuronal survival when injected into the hippocampus of rats in the model of epilepsy Microarray analysis was used to understand the expression of genes following KA treatment and the changes in gene expression following KA+NAP treatment Keyword...

ORGANISM(S): Rattus norvegicus

2010-04-06 | E-GEOD-10923 | biostudies-arrayexpress

Nucleosome assembly protein-1 (NAP-1) is regulator of histone H1 acetylation

We identified NAP-1 as regulator of histone H1 acetyation.

ORGANISM(S): Drosophila melanogaster

2020-10-10 | GSE159294 | GEO

A pentatricopeptide repeat protein restores nap cytoplasmic male sterility in Brassica napus.

Not available

S-EPMC5853434 | biostudies-literature

MO-OH-Nap and SAHA induce distinct patterns of gene expression in the multiple myeloma cell line U266.

Tropolones are small organic compounds with metal-directing moieties. Functionally, tropolones inhibit the proliferation of cancer cell lines, possibly through the inhibition of metalloenzymes such as select histone deacetylases (HDACS). Pan-HDAC inhibitors are therapeutically beneficial in the trea...

ORGANISM(S): Homo sapiens

2018-01-01 | GSE93099 | GEO

Reduction of aluminum ion neurotoxicity through a small peptide application - NAP treatment of Alzheimer's disease.

Not available

S-EPMC9296191 | biostudies-literature

A new crystal lattice structure of Helicobacter pylori neutrophil-activating protein (HP-NAP).

Not available

S-EPMC3274388 | biostudies-literature

NAK-associated protein 1/NAP1 activates TBK1 to ensure accurate mitosis and cytokinesis.

Supporting raw MS data for paper (DOI:10.1083/jcb.202303082) by Paul S. et al., titled "NAK-associated protein 1/NAP1 activates TBK1 to ensure accurate mitosis and cytokinesis". Index of MS supporting files uploaded: - Related to Figure 6A;S4A (AO3556-AO3579: whole proteome (Unimod: 35; 2016; 4)). -...

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2023-11-01 | MSV000093220 | MassIVE

CG-NAP/Kinase Interactions Fine-Tune T Cell Functions.

Not available

S-EPMC6861388 | biostudies-literature

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