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TranscriptomicsThe basal cm of leaf 4 of GA2OX::PLA1 (193-01) versus wild type in the growth chamber and the field (May-June 2015)
GA2OX::PLA1 transgenic plants and their none-transgenic siblings were grown in the field in Wetteren and in the growth chamber. In the field, we sampled three plants per plot (three plots were sown per genotype), resulting in three pools each consisting of three plants. Every pool represented a dif...
ORGANISM(S): Zea mays 
2019-10-16 | E-MTAB-8094 | biostudies-arrayexpress
TranscriptomicsThe basal cm of leaf 4 of GA2OX::PLA1 (193-01) versus wild type in the growth chamber and the field (May-June 2016)
GA2OX::PLA1 transgenic plants and their none-transgenic siblings were grown in the field in Wetteren and in the growth chamber. In the field, we sampled three plants per plot (three plots were sown per genotype), resulting in three pools each consisting of three plants. Every pool represented a dif...
ORGANISM(S): Zea mays 
2019-10-16 | E-MTAB-8095 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis mutants (elo2, elo3, drl1-2 and ang4) vs the wild type Ler strain
The goal is to compare each mutant (elo2, elo3, drl1-2 and ang4) to the wild-type Ler. The experimental design comprised 3 replicates of each genotype, one replicate corresponding to one RNA extraction on a independent pool of plants.
ORGANISM(S): Arabidopsis thaliana 
2005-04-06 | E-MEXP-300 | biostudies-arrayexpress
TranscriptomicsRNA-seq analysis of the most basal half centimeter (dividing cells) of the fourth leaf of maize RIL89 plants, profiled at different time points after leaf appearance and with different watering conditions
Transcriptome of the most basal half centimeter (dividing cells) of the fourth leaf of maize RIL89 plants was profiled at different days after leaf appearance (DALA). Leaf samples were taken for well-watered and water deficit plants at 4, 5, 6 and 7 days after the appearance of leaf four and at day ...
ORGANISM(S): Zea mays 
2023-03-01 | E-MTAB-7749 | biostudies-arrayexpress
GenomicsIdentification of Peopod2 (PPD2) target genes through GSyellow-based ChIP-seq in Arabidopsis thaliana PSB-D cell cultures.
Genome-wide target genes of PPD2 were identified through ChIP-seq on Arabidopsis cell cultures. For ChIP-seq, PPD2 was fused to the GSyellow TAP tag and expressed from the 35S promoter. The p35S:PPD2-GSyellow construct was transformed into Arabidopsis thaliana PSB-D cell culture. ChIP was performed ...
ORGANISM(S): Arabidopsis thaliana 
2018-08-07 | E-MTAB-6513 | biostudies-arrayexpress
TranscriptomicsRNA-seq data on leaf 8 blade tissue of 62 individual Brassica napus (Darmor) plants grown in the field.
62 individual Brassica napus plants of the same accession grown in the same field were expression-profiled in autumn 2016 and phenotyped extensively until harvest in spring 2017. Machine learning models were used to link gene expression to the phenotypes of individual plants, with the purpose of ass...
ORGANISM(S): Brassica napus 
2022-10-10 | E-MTAB-11904 | biostudies-arrayexpress
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