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TranscriptomicsRapid reprogramming of epigenetic and transcriptional profiles in mammalian culture systems
Comparison of the methylation profile of mouse embryonic fibroblasts (MEFs) before and during adaptation to cell culture conditions. Matched expression data is deposited under accession: E-MTAB-3172
ORGANISM(S): Mus musculus 
2014-12-17 | E-MTAB-3176 | biostudies-arrayexpress
TranscriptomicsRNA-seq of SUPT1, LOUCY, JURKAT and DND41 after treatment with 5-azacytidine and Vitamin C
TET2 is a know tumorsuppressor gene involved in the demethylation of DNA. TET2 catalyses the conversion of 5-methyl cytosine (5-mC) to 5-hydroximethyl cytosine (5-hmC), an important step in the removal of methylation from the DNA. In T-All mutations in TET2 are rare, however we have found that it is...
ORGANISM(S): Homo sapiens 
2021-08-04 | E-MTAB-10512 | biostudies-arrayexpress
TranscriptomicsRapid reprogramming of epigenetic and transcriptional profiles in mammalian culture systems
5-hmC profiling of mouse embryonic fibroblasts before and during adaptation to cell culture conditions using hMeDIP-chip
ORGANISM(S): Mus musculus 
2014-12-17 | E-MTAB-3177 | biostudies-arrayexpress
TranscriptomicsHydroxymethyl DNA-IP of genomic DNA for many different normal human tissues
5-hmC is a novel epigenetic mark derived from oxidation of methylcytosine. We profile this mark in several normal human tissues 5-hmC patterns are highly tissue specific and enriched in the body of transcribed genes 5-hmC patterns are highly tissue specific and enriched in the body of transcribed ge...
ORGANISM(S): Homo sapiens 
2011-11-18 | E-GEOD-33219 | biostudies-arrayexpress
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