Neuroscience - OmicsDI

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Unknown (129365)
Genomics (2347)
Proteomics (366)
Transcriptomics (171)
Metabolomics (21)
Genomic (15)
Models (9)
Other (7)
Methylation profiling (6)
Clinical (2)

Organisms

Schizosaccharomyces pombe (345)
Oryza sativa Indica Group (345)
Sinorhizobium meliloti BL225C (345)
Sus scrofa domesticus (345)
Ostreococcus tauri (345)
Saccharomyces cerevisiae (345)
Staphylococcus aureus (345)
Rattus norvegicus (345)
Escherichia coli (345)
Candida albicans (345)
Cyanophora paradoxa (345)
Entamoeba histolytica (345)
Mus musculus (109)
Homo sapiens (61)
Rattus norvegicus (13)
Drosophila melanogaster (5)
Aplysia californica (4)
Sus scrofa (3)
Rattus (2)
Zea mays (2)
Macaca mulatta (2)
Callithrix jacchus (2)
Neisseria gonorrhoeae (1)
Danio rerio (1)
Nasonia vitripennis (1)
Mustela putorius furo (1)
Taeniopygia guttata (1)
Canis lupus familiaris (1)
Caenorhabditis elegans (1)
Halobacterium salinarum NRC-1 (1)

Organisms

Mus musculus (1108)
Homo sapiens (514)
Rattus norvegicus (137)
Drosophila melanogaster (57)
Macaca mulatta (55)
Danio rerio (36)
Macaca fascicularis (13)
Sus scrofa (9)
Taeniopygia guttata (5)
Callithrix jacchus (5)
Arvicanthis niloticus (4)
Mustela putorius furo (4)
Chlorocebus sabaeus (4)
Caenorhabditis elegans (4)
Gallus gallus (4)
Macaca fascicularis x Macaca mulatta (3)
Excalfactoria chinensis (3)
Chaetodon trifascialis (3)
Ranitomeya variabilis (3)
Leucoraja erinaceus (3)
Aplysia californica (3)
Chaetodon auriga (3)
Macaca nemestrina (3)
Bos taurus (3)
Escherichia coli str. K-12 substr. MG1655 (2)
Ictidomys tridecemlineatus (2)
Xenopus laevis (2)
Oryctolagus cuniculus (2)
Plasmodium falciparum (2)
Rubrobacter naiadicus (1)

Repository

ENA (2336)
pride (345)
geo (97)
biostudies-arrayexpress (94)
MetaboLights (20)
dbGaP (15)
MassIVE (12)
BioModels (9)
iProX (6)
EGA (3)
jPOST (2)
GNPS (1)
PanoramaPublic (1)
PeptideAtlas (1)

Tissue

Brain (168)
Cell culture (44)
Cerebrospinal fluid (10)
Amygdala (9)
Neuron (9)
Blood plasma (9)
Permanent cell line cell (9)
Blood (9)
Stem cell (8)
HeLa cell (8)
Blood cell (8)
Astrocyte (7)
Neuron of cerebral cortex (6)
Retina (5)
Fibroblast (5)
Primary cell (5)
Primary cell line cell (4)
Hippocampus (4)
Microglial cell (4)
Early embryonic cell (4)
Cell suspension culture (4)
Embryo (4)
Whole body (4)
Epithelial cell (4)
Monocyte (4)
Layer of hippocampus (3)
Spinal ganglion (3)
Motor neuron (3)
Placenta (3)
Blood platelet (3)

Disease

Alzheimer's disease (20)
Parkinson's disease (15)
Amyotrophic lateral sclerosis (10)
Disease free (9)
Post-traumatic stress disorder (6)
Huntington Disease (4)
Glaucoma (3)
Brain cancer (3)
Acute stress disorder (2)
Leukoencephalopathy with vanishing white matter (2)
Tauopathy (2)
Multiple sclerosis (2)
Frontotemporal dementia (2)
Cardiovascular system disease (2)
Amyotrophic lateral sclerosis type 9 (2)
Kidney Neoplasms (1)
Neoplasm Metastasis (1)
Progressive multifocal leukoencephalopathy (1)
Alzheimer's disease 10 (1)
Demyelinating disease (1)
Vascular myelopathy (1)
Obsessive-compulsive disorder (1)
Creatine transporter deficiency (1)
Semantic dementia (1)
B-cell adult acute lymphocytic leukemia (1)
Chronic pain (1)
Primary progressive multiple sclerosis (1)
Neurological alteration (1)
Alcohol dependence (1)
Lissencephaly 1 (1)

Technology Type

Mass Spectrometry (345)
Shotgun proteomics (142)
Bottom-up proteomics (85)
Affinity purification coupled with mass spectrometry proteomics (72)
SWATH MS (59)
Data-dependent acquisition (43)
Gel-based experiment (35)
Data-independent acquisition (25)
Mass spectrometry (11)
Top-down proteomics (10)
DiaPASEF (7)
NMR spectroscopy (5)
Mass spectrometry assay (4)
All-ion fragmentation (4)
SRM/MRM (4)
Chemical cross-linking coupled with mass spectrometry proteomics (3)
Affinity proteomics (2)
Olink affinity proteomics (1)
Mass spectrometry imaging (1)
MSE (1)

Instrument Platform

Varian (4)
Liquid Chromatography MS - positive - reverse phase (4)
Liquid Chromatography MS - negative - reverse phase (4)
Q Exactive (3)
Illumina HiSeq 2500 (2)
Illumina HiSeq 2000 (2)
6560 Q-TOF LC/MS (2)
TimsTOF HT (2)
Orbitrap Fusion (2)
Liquid Chromatography MS - alternating - reverse phase (2)
NextSeq 550 (1)
Illumina NovaSeq 6000 (1)
Illumina HiSeq 4000 (1)
NextSeq 500 (1)
Agilent LC-QTOF 6545XT mass spectrometer (1)
TripleTOF 6600 (1)
Q Exactive HF (1)
Q Exactive Plus (1)
Orbitrap Exploris 480 (1)
Orbitrap Fusion Lumos (1)
Gas Chromatography MS - (1)
Liquid Chromatography MS - - - Q Exactive (1)
Nuclear Magnetic Resonance (NMR) (1)
Liquid Chromatography MS - - reverse phase (1)
Quattro Premier XE (Waters) (1)
LTQ Orbitrap XL (Thermo Scientific) (1)
API 5500 QTRAP (AB Sciex) (1)
Bruker (1)
Xevo G2 QTOF (Waters) (1)
Liquid Chromatography MS - (1)

Publication Date

2026 (90)
2025 (58)
2024 (54)
2023 (53)
2021 (49)
2022 (45)
2015 (43)
2020 (38)
2019 (32)
2014 (20)
2017 (19)
2018 (19)
2013 (18)
2016 (16)
2011 (9)
2010 (6)
2007 (6)
2012 (4)
2009 (2)
2005 (1)
2006 (1)

CHEBI ID

CHEBI:14314 (5)
CHEBI:16761 (5)
CHEBI:29108 (4)
CHEBI:16908 (3)
CHEBI:1687 (2)
CHEBI:42317 (2)
CHEBI:23616 (2)
CHEBI:13960 (2)
CHEBI:23093 (2)
CHEBI:3593 (2)
CHEBI:57884 (2)
CHEBI:23094 (2)
CHEBI:3588 (2)
CHEBI:14734 (2)
CHEBI:25843 (2)
CHEBI:872 (2)
CHEBI:28907 (2)
CHEBI:11417 (2)
CHEBI:19325 (2)
CHEBI:19306 (2)
CHEBI:41885 (2)
CHEBI:19307 (2)
CHEBI:18900 (2)
CHEBI:495 (2)
CHEBI:4481 (2)
CHEBI:23653 (2)
CHEBI:13582 (2)
CHEBI:11151 (2)
CHEBI:11150 (2)
CHEBI:14135 (2)

Metabolite Name

Valine (4)
Methionine (4)
Choline (4)
Tyrosine (4)
Isoleucine (4)
Creatinine (4)
Creatine (4)
Proline (3)
Betaine (3)
Histidine (3)
Phenylalanine (3)
Tyrosine (3)
Threonine (3)
Glucose (3)
Choline (3)
Creatinine (3)
Creatine (3)
Alanine (3)
Lactate (3)
Valine (3)
Isoleucine (3)
Leucine (3)
Glycerol (3)
Glycine (3)
Betaine (3)
Citric acid (3)
3-Hydroxybutyric acid (3)
Alanine (3)
Succinate (3)
Sarcosine (3)

First Public Date

2014 (319)
2024 (251)
2026 (238)
2023 (232)
2025 (229)
2021 (169)
2022 (168)
2020 (168)
2019 (141)
2018 (123)
2017 (115)
2015 (71)
2016 (60)
2013 (52)

Modelling Approach

Ordinary differential equation model (6)
Constraint-based model (2)
Computational model (1)

Study status

Terminated (1)
Completed (1)

Lab affiliation

Department of Animal and Poultry Sciences and the School of Neuroscience, Virginia Tech, Blacksburg, VA, USA (21)
Center for Neuroscience and Cell Biology – University of Coimbra (9)
Paris-Saclay Institute of Neuroscience, Team Melki, CNRS, Gif-sur-Yvette, France (8)
Department of Molecular and Cellular Neurobiology, Center for Neurogenomics & Cognitive Research, Neuroscience Campus Amsterdam, VU University, Amsterdam, The Netherlands (6)
Center for Neuroscience and Cell Biology (5)
Department of Molecular and Cellular Neurobiology, Center for Neurogenomics and Cognitive Research, Amsterdam Neuroscience, Vrije Universiteit Amsterdam, Amsterdam, The Netherlands (4)
Department of Physiology, Development and Neuroscience, University of Cambridge, Downing Street, Cambridge CB2 3DY, UK. (3)
Department of Molecular and Cellular Neurobiology, Center for Neurogenomics and Cognitive Research, Amsterdam Neuroscience, Vrije Universiteit Amsterdam, The Netherlands (3)
Institute of Neuroscience, College of Medicine, Xiamen University, Xiamen, Fujian 361005, China (2)
Associate Professor, School of Animal Sciences Core Faculty, School of Neuroscience Faculty of Health Sciences Vice Chair, Institutional Biosafety Committee (IBC) Virginia Tech (2)
Laboratory of Neuroimmunology, Neuroscience Research Centre, Department of Clinical Neurosciences, Lausanne University Hospital (CHUV) and University of Lausanne, Lausanne, Switzerland Service of Neurology, Department of Clinical Neurosciences, Lausanne University Hospital (CHUV) and University of Lausanne, Lausanne, Switzerland (2)
CNC-Center for Neuroscience and Cell Biology, University of Coimbra, 3004-517 Coimbra, Portugal; Biocant, Biotechnology Innovation Center, 3060-197 Cantanhede, Portugal (2)
1 Department of Molecular Neurosciences, Center for Brain Research, Medical University of Vienna, Spitalgasse 4, A-1090 Vienna, Austria; 2 Department of Neuroscience, Karolinska Institutet, Retzius väg 8, SE-17177 Stockholm, Sweden (2)
ULB Neuroscience Institute (UNI) Université Libre de Bruxelles (ULB) B-6041 Gosselies, Belgium. (2)
Department of Pharmacology & Neuroscience UNT Health Science Center Fort Worth, TX, USA (2)
Biomedical Research Institute of Lleida Dr. Pifarré Foundation (IRBLLEIDA) - +Pec Proteomics Research Group (+PPRG) - Neuroscience Area – University Hospital Arnau de Vilanova (HUAV), 80 Av. Rovira Roure, 25198, Lleida, Spain Department of Medical Basic Sciences, University of Lleida (UdL), +Pec Proteomics Research Group (+PPRG), 25198, Lleida, Spain (2)
University of Connecticut School of Medicine, Department of Neuroscience, Farmington, CT, 06032, USA (2)
Center of Neurogenomics and Cognitive Research (CNCR), Department of Molecular and Cellular Neurobiology, Vrije Universiteit, Amsterdam, Netherlands (2)
Molecular Neuroscience Research Center, Shiga University of Medical Science, Japan (2)
Lab of Jie Zheng, Neuroscience Research Institute and Department of Neurobiology, School of Basic Medical Sciences, Peking University, Beijing 100083, P.R. China (2)
Group Leader, Quattrocolo Lab, Kavli Institute for Systems Neuroscience and Centre for Neural Computation, Norwegian University of Science and Technology (NTNU), Trondheim 7491, Norway (2)
Molecular Neuropharmacology and Genetics Laboratory, Department of Neuroscience, Faculty of Health and Medical Sciences, University of Copenhagen, 2200, Denmark (2)
Department of Neuroscience, University of Florida (2)
Centre for Functional Ecology, University of Coimbra (2)
Department of Neuroscience of Disease, Brain Research Institute, Niigata University (2)
Department of Physiology, Institute of Neuroscience and Physiology, University of Gothenburg, Sweden (2)
Center for Neurogenomics and Cognitive Research, Department of Molecular and Cellular Neurobiology, Amsterdam Neuroscience, Vrije Universiteit Amsterdam, 1081 HV Amsterdam, The Netherlands. (2)
Borch Department of Medicinal Chemistry and Molecular Pharmacology, Purdue University, West Lafayette, Indiana 47907, United States Purdue Institute for Integrative Neuroscience, Purdue University, West Lafayette, Indiana 47907, United States (2)
Department of Cell and Developmental Biology, Neuroscience Graduate Program, Department of Neurology University of Michigan Medical School, Ann Arbor, MI 48109-2200 (2)
Professor Fellow, American Institute for Medical and Biological Engineering Fellow, American Association for the Advancement of Science Rutgers University Department of Cell Biology and Neuroscience (2)