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ModelsCosta2014 - Computational Model of L. lactis Metabolism
Costa2014 - Computational Model of L. lactis Metabolism This model is described in the article: An extended dynamic model of Lactococcus lactis metabolism for mannitol and 2,3-butanediol production. Costa RS, Hartmann A, Gaspar P, Neves AR, Vinga S. Mol Biosyst 2014 Mar; 1...
2024-09-02 | BIOMD0000000572 | BioModels
ProteomicsIdentification of novel genes and proteoforms in Angiostrongylus costaricensis through a proteogenomic approach
Data from multiple high throughput technologies such as RNA sequencing (RNA-Seq) and protein mass spectrometry (MS/MS) are often used to assist in predicting eukaryote genome features such as genes, splice variants, and single nucleotide variants (SNVs). The genomes of parasitic nematodes causing ne...
ORGANISM(S): Angiostrongylus costaricensis 
2023-03-11 | PXD034605 | Pride
Rna-seq  mass spectrometry  nematode  genome annotation  ncrnas 
ProteomicsMolecular architecture of the antiophidic protein DM64 and its binding specificity to myotoxin II from Bothrops asper venom
DM64 is a toxin-neutralizing serum glycoprotein isolated from the South American opossum Didelphis aurita. This ophiophagous marsupial is naturally resistant to snake envenomation and has evolved such biochemical defense as a trophic adaptation. The endogenous antitoxin is a human α1B-glycoprotein h...
ORGANISM(S): Bothrops asper Didelphis aurita 
2022-01-20 | PXD028522 | Pride
Molecular modeling Snake venom Structural model Toxin Structure-function Mass-spectrometry Inhibitor Protein cross-linking 
ProteomicsADAM17 cytoplasmic domain modulates Thioredoxin-1
We have previously shown that Thioredoxin-1 (Trx-1) binds to the cytoplasmic domain of ADAM17 (ADAM17cyto), A Disintegrin And Metalloprotease 17, and that the destabilization in their interface of interaction favors the Trx-1 dimeric and inactive state. These studies opened the question of whether A...
ORGANISM(S): Homo Sapiens 
2021-03-12 | PXD020016 | panorama
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