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TranscriptomicsAnalysis of Colletotrichum orbiculare whi2Δ mutant infection of Cucumis sativus at 4hpi
Colletotrichum orbiculare Whi2, yeast stress response Whi2 homolog, is involved in switch from biotrophic to necrotrophic stage. To elucidate downstream genes regulated by Co Whi2, we have conducted DNA microarray. About 3100 genes were up or down regulated in the Co whi2Δ mutant compared with the ...
ORGANISM(S): Colletotrichum orbiculare 
2016-04-01 | E-GEOD-73096 | biostudies-arrayexpress
TranscriptomicsTranscriptome Analysis of Wounding-Induced Root to Shoot Communication in Arabidopsis thaliana.
Comparison of gene expression between shoots of root-wounded seedlings and shoots of control seedlings in Arabidopsis. We identified wounding-induced early (30 min) and late (360 min) root to shoot responsive genes (RtS). Two-condition experiment, shoots of root-wounded seedlings vs. shoots of contr...
ORGANISM(S): Arabidopsis thaliana 
2010-12-31 | E-GEOD-26374 | biostudies-arrayexpress
ProteomicsContinuous and prolonged breastfeeding in wild Bornean orangutans verified with fecal proteomics
Orangutans have a slow life history with one of the longest interbirth intervals and the lowest reported infant mortality rates among primates or even mammals. Breastfeeding is a key factor in their life history because it possibly promotes offspring health and increases maternal interbirth interval...
ORGANISM(S): Pongo pygmaeus morio 
2026-03-19 | PXD060699 | Pride
TranscriptomicsThe effect of HP1-gamma deficiency on primordial germ cells
We compared the gene expression profiles of the HP1 gamma -/- vs wild-type PGCs to examine the molecular mechanisms of HP1g in PGC development. Although HP1g is suggested to be involved in PGC proliferation, our microarray data indicated that HP1g does not directly control PGC cell-cycle progression...
ORGANISM(S): Mus musculus 
2011-07-31 | E-GEOD-27294 | biostudies-arrayexpress
ProteomicsDataset for proteome analysis of epidermis of Arabidopsis leaves inoculated with Fusarium graminearum
We analyzed protein expression of Arabidopsis leaf epidermis after inoculation of Fusarium graminearum.
ORGANISM(S): Arabidopsis Thaliana (mouse-ear Cress) 
2023-01-21 | PXD039595 | JPOST Repository
TranscriptomicsDevelopment of gene sets after deleting Rb or Rb and Pten in p53 null background primary prostate cells
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Mus musculus 
2015-12-31 | E-GEOD-68905 | biostudies-arrayexpress
TranscriptomicsImpact of oral compost-extract administration on gene expression in the rat gastrointestinal tract
Oral administration of an extract of compost fermented with thermophiles to pigs reduces the incidence of stillbirth and promotes piglet growth. However, the mechanism by which compost extract modulates the physiological conditions of the animals remains largely unknown. Here, we investigate the eff...
ORGANISM(S): Rattus norvegicus 
2012-11-02 | E-GEOD-37732 | biostudies-arrayexpress
TranscriptomicsIdentification of Hr38 as a neural activity-induced gene
Silkworms show a reproductive behavior induced by sex pheromone. To elucidate the neral mechanism of sex pheromone induced sexual behavior in the silkworm, we attempted to use the neural activity-induced gene as a neural activity marker. Since no neural activity-induced gene was identified in the si...
ORGANISM(S): Bombyx mori 
2014-01-01 | E-GEOD-39306 | biostudies-arrayexpress
TranscriptomicsDevelopment of gene sets after deleting Rb in p53 null background primary prostate cells [Rb only]
Our findings suggested that cytokines were upregulated in p53 null primary prostate cells after deleting Rb. Rb deletion is important for prostate cancer progression. p53-/- Rbf/f vs p53-/- Rb∆f/∆f primary prostate cells.Three independent experiments were performed.
ORGANISM(S): Mus musculus 
2015-12-31 | E-GEOD-68903 | biostudies-arrayexpress
TranscriptomicsDevelopment of gene sets after deleting Rb and Pten in p53 null background primary prostate cells [Rb and Pten]
Our findings suggested that cytokines were upregulated in p53 null primary prostate cells after deleting Rb and/or Pten. Rb and Pten deletion are important for prostate cancer progression. p53-/- Rbf/f vs p53-/- Rb∆f/∆f primary prostate cells. Three independent experiments were performed. p53-/...
ORGANISM(S): Mus musculus 
2015-12-31 | E-GEOD-68904 | biostudies-arrayexpress
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