Nist - OmicsDI

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Unknown (1811)
Metabolomics (399)
Proteomics (113)
Genomics (69)
Transcriptomics (50)
Other (6)
Methylation profiling (2)
Clinical (1)

Organisms

Aerococcus urinae NBRC 15544 = CCUG 36881 (78)
Allexis (78)
Canis lupus familiaris (78)
Carya cathayensis (78)
Clostridioides difficile 630 (78)
Cyanophora paradoxa (78)
Ensifer adhaerens (78)
Enterococcus faecalis (78)
Globicatella sanguinis (78)
Histomonas meleagridis (78)
Human immunodeficiency virus 1 (78)
Listeria monocytogenes (78)
Lotus japonicus (78)
Marchantia polymorpha (78)
Methylohalobius crimeensis 10Ki (78)
Mus musculus (78)
Mycobacterium tuberculosis (78)
Ophrys garganica (78)
Ophrys sphegodes (78)
Physcomitrium patens (78)
Pseudomonas aeruginosa SJTD-1 (78)
Pseudomonas putida KT2440 (78)
Homo sapiens (35)
Mus musculus (25)
Drosophila melanogaster (5)
synthetic construct (3)
Caenorhabditis elegans (2)
standard reference vector pMCS (2)
Haloferax volcanii (1)
Saccharomyces cerevisiae (1)

Organisms

Homo sapiens (20)
Mus musculus (4)
Balaenoptera ricei (3)
Tursiops truncatus (2)
Daphnia magna (2)
Escherichia coli (2)
Influenza A virus (1)
human gut metagenome (1)

Repository

MetaboLights (241)
MetabolomicsWorkbench (104)
pride (78)
biostudies-arrayexpress (57)
ENA (57)
GNPS (39)
MassIVE (39)
NODE (15)
geo (6)
jPOST (2)
EGA (1)

Tissue

Blood (51)
Blood plasma (16)
Cell culture (14)
Urine (10)
Colonic cancer cell (10)
Rectal cancer cell (10)
Urine (7)
Liver (6)
Feces (5)
Cells (4)
Intestine (4)
Muscle (4)
Bacterial cells (4)
Adipose tissue (3)
Plant (3)
Cerebrospinal fluid (3)
Cultured cells (3)
Heart (2)
Lung (2)
Macrophages (2)
Head (1)
Breast (1)
Mitochondria (1)
Placenta (1)
Prostate (1)
Yeast cells (1)
Wine (1)
Brain (1)
Kidney (1)
Human urine, plasma and BV2 cell (1)

Disease

Colon adenocarcinoma (10)
Rectum adenocarcinoma (10)
Cancer (9)
Breast cancer (4)
Cervix carcinoma (4)
Obesity (3)
Malignant neoplasm of ovary (3)
Myalgic encephalomyelitis/chronic fatigue syndrome (2)
Environmental exposure (2)
Bacterial infection (2)
Diabetes (2)
Ovary serous adenocarcinoma (2)
Stomach cancer (2)
Inflammatory Bowel Diseases (1)
Arthritis (1)
Maternal Hypoxemia (1)
Asthma (1)
Trauma (1)
Infection (1)
Micronutrient deficiency (1)
Hypertension (1)
Wilson disease (1)
Interstitial cystitis (1)
Antibiotic resistance (1)
Kidney disease (1)
Sepsis (1)
Malaria (1)
Fatty liver disease (1)
Acute leukemia (1)
Disease free (1)

Technology Type

Mass spectrometry (191)
Mass Spectrometry (182)
EI (76)
Mass spectrometry assay (49)
Shotgun proteomics (49)
ESI (31)
Bottom-up proteomics (9)
Affinity purification coupled with mass spectrometry proteomics (8)
Data-dependent acquisition (7)
SRM/MRM (5)
NMR spectroscopy (4)
SWATH MS (4)
Data-independent acquisition (2)
Mass spectrometry imaging (2)
Top-down proteomics (2)
Affinity proteomics (1)
All-ion fragmentation (1)
Gel-based experiment (1)
Olink affinity proteomics (1)

Instrument Platform

Illumina HiSeq 1500 (27)
Q Exactive (16)
Orbitrap Fusion Lumos (13)
6560 Q-TOF LC/MS (8)
Q Exactive HF (8)
NextSeq 550 (6)
Orbitrap Astral (5)
Orbitrap Exploris 480 (5)
Illumina NovaSeq 6000 (4)
TimsTOF fleX (4)
Orbitrap Eclipse (4)
Illumina Genome Analyzer II (3)
Illumina MiSeq (3)
Illumina Genome Analyzer (2)
Illumina HiSeq 2000 (2)
NextSeq 500 (2)
MaXis (2)
N/A (2)
Q Exactive|1001911 (2)
Q-Exactive plus (2)
Agilent 6546 Q-TOF (2)
Xevo G2-S Tof (2)
Illumina HiSeq 1000 (1)
Agilent 6546 LC/Q-TOF (1)
MaXis II (1)
Q Exactive GC Orbitrap GC-MS/MS (1)
Q Exactive-GC Orbitrap-MS/MS (1)
Q-Exactive (1)
SCIEX software|1000690 (1)
Thermo Q-Exactive Orbitrap (1)

Publication Date

2026 (54)
2021 (50)
2020 (50)
2022 (43)
2023 (42)
2025 (39)
2019 (36)
2024 (30)
2018 (30)
2015 (21)
2017 (20)
2014 (14)
2016 (11)
2010 (7)
2012 (6)
2013 (1)
2009 (1)

CHEBI ID

CHEBI:15756 (79)
CHEBI:30769 (79)
CHEBI:15428 (78)
CHEBI:28842 (75)
CHEBI:15741 (73)
CHEBI:17268 (62)
CHEBI:28044 (62)
CHEBI:18012 (62)
CHEBI:17822 (59)
CHEBI:17992 (56)
CHEBI:18237 (53)
CHEBI:17754 (53)
CHEBI:16865 (53)
CHEBI:27266 (51)
CHEBI:6650 (50)
CHEBI:17351 (49)
CHEBI:25094 (48)
CHEBI:22660 (48)
CHEBI:26271 (47)
CHEBI:18186 (47)
CHEBI:16449 (47)
CHEBI:28300 (46)
CHEBI:25017 (46)
CHEBI:16958 (46)
CHEBI:26986 (45)
CHEBI:18257 (45)
CHEBI:16000 (45)
CHEBI:17568 (45)
CHEBI:30805 (43)
CHEBI:33508 (43)

Metabolite Name

Glycine (42)
Citric acid (36)
Succinic acid (33)
Sucrose (33)
Serine (31)
Malic acid (30)
Alanine (30)
Stearic acid (29)
Ethanolamine (28)
Valine (28)
Lactic acid (27)
Glycerol (27)
Glycolic acid (26)
Ornithine (26)
Palmitic acid (26)
Fumaric acid (25)
Phenylalanine (25)
Pyroglutamic acid (24)
Benzoic acid (24)
Glyceric acid (24)
Fructose (24)
L-Tryptophan (24)
Glutamic acid (24)
Hypoxanthine (24)
Uracil (23)
L-Proline (23)
Adenosine (23)
Threonine (23)
Isoleucine (23)
Glucose (23)

First Public Date

2026 (14)
2023 (6)
2025 (5)
2024 (5)
2020 (5)
2019 (5)
2014 (5)
2021 (4)
2015 (3)
2013 (3)
2022 (1)
2017 (1)

Classification

bacteria (2)
viruses (1)

Study status

Completed (1)

Study type

RNA-seq of coding RNA (30)
ChIP-seq (9)
Transcription profiling by array (6)
RNA-seq of coding RNA from single cells (3)
Animal - High-throughput sequencing (2)
Cell line - High-throughput sequencing (2)
DNA-seq (2)
RNA-seq of non coding RNA (2)
Transcription profiling by tiling array (1)
Observational (1)

Release Date

2019 (251)
2020 (223)
2018 (217)
2021 (192)
2017 (169)
2016 (160)
2024 (141)
2022 (139)
2023 (124)
2025 (105)
2015 (49)
2014 (20)
2013 (14)
2026 (14)
2010 (13)
2012 (11)
2009 (7)
2011 (5)
2008 (5)
2007 (4)
2005 (2)
2004 (1)
2001 (1)

Lab affiliation

Vanderbilt University (11)
Department of Biotechnology, Faculty of Converging Sciences and Technologies, Islamic Azad University, Science and Research Branch, Tehran, Iran, Mailbox: 775/14515, Postcode: 1477893855, ORCID: 0000-0001-6656-777X (2)
Department of Mathematics and Computer Science, University of Antwerp, Belgium (2)
Laboratoire de Spectrométrie de Masse BioOrganique (LSMBO), Université de Strasbourg, CNRS, IPHC, UMR 7178, 25 Rue Becquerel, F-67087 Strasbourg, France (2)
Molecular and Applied Microbiology, Leibniz Institute for Natural Product Research and Infection Biology / Hans Knöll Institute Jena (Leibniz-HKI), Jena, Germany (2)
Pacific Northwest National Laboratory (2)
Tranlational Oncology Group, Center for Tumor Biology and Immunology, Philipps University, Marburg, Germany (2)
Associate Professor of Medicine Harvard Medical School Director, Mass Spectrometry Core Beth Israel Deaconess Medical Center 3 Blackfan Circle CLS 447 office CLS 425 lab Boston, MA 02115 Tel: 617-735-2651 (1)
Australian Institute for Bioengineering and Nanotechnology, The University of Queensland (1)
Biomolecular Measurement Division, National Institute of Standards and Technology (1)
Biomolecular Measurement Division, National Institute of Standards and Technology (NIST) (1)
CECAD Research Center, University of Cologne, Joseph-Stelzmann-Str 26, 50931 Cologne, Germany (1)
CICS-UBI–Health Sciences Research Center, Universidade da Beira Interior, 6201-506 Covilhã, Portugal (1)
Center for Proteomics and Metabolomics, Leiden University Medical Center (1)
Center for Proteomics and Metabolomics, Leiden University Medical Center and Proteomics Centre, University of Victoria (1)
Center for Tumor Biology and Immunology (ZTI), Philipps University, Hans-Meerwein-Strasse 3, 35043 Marburg, Germany (1)
Centre for Clinical Proteomics, Department of Clinical Biochemistry and Pharmacology, Odense University Hospital, Denmark (1)
Centre for Proteome Research, Department of Biochemistry, University of Liverpool, UK (1)
Clinical Protein Science & Imaging, Biomedical Centre, Department of Biomedical Engineering, Lund University (1)
Department for Molecular and Applied Microbiology, Leibniz Institute for Natural Product Research and Infection Biology, Hans Knöll Institute Jena, Germany (1)
Department of Clinical Laboratory, National Center for Respiratory Medicine, National Clinical Research Center for Respiratory Disease, State Key Laboratory of Respiratory Disease, Guangzhou Institute of Respiratory Health, The First Affiliated Hospital of Guangzhou Medical University, Guangzhou, Guangdong 510120, China. (1)
Department of Molecular and Applied Microbiology, Leibniz Institute for Natural Product Research and Infection Biology, Hans Knöll Institute Jena, Leibniz-HKI, Adolf-Reichwein-Str. 23, 07745 Jena, Germany (1)
Dr. Gerhard Mittler Proteomics Research Facility/Unit Max Planck Institute of Immunobiology and Epigenetics Stuebeweg 51, D-79108 Freiburg, Germany (1)
Federal University of Rio de Janeiro (1)
GlaxoSmithKline CMC Analytical (1)
Histone Modifications Group Zentrallabor für Proteinanalytik BioMedical Center Faculty of Medicine Ludwig-Maximilians-University of Munich Großhadernerstr. 9 82152 Planegg-Martinsried (1)
Insitute of Molecular Biology and Tumor Research (IMT) University Marburg, Germany (1)
Institut für Molekularbiologie und Tumorforschung (IMT) Biomedizinisches Forschungszentrum Philipps-Universität Marburg Hans-Meerwein-Straße 2 35043 Marburg (Germany) Phone: +49-(0)6421-28-66840 (1)
Institute for molecular biology and tumor research Philipps University Marburg, Germany (1)
Institute for molecular biology and tumor research, Philipps University Marburg Marburg, Germany (1)

Location

United States (1)

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NIST lipidomics intralaboratory study

Not available

ORGANISM(S): Homo sapiens

ST000136 | MetabolomicsWorkbench

NIST SRM Smoker non-Smoker Urine Comparison

Not available

ORGANISM(S): Homo sapiens

ST000420 | MetabolomicsWorkbench

LipidCreator workbench to probe the lipidomic landscape - Targeted lipidomics analysis of Human Plasma samples and comparison with NIST SRM 1950 standard

Here we present LipidCreator, a software that fully supports targeted lipidomics assay development. LipidCreator offers a comprehensive framework to compute MS/MS fragment masses for over 60 lipid classes. LipidCreator provides all functionalities needed to define fragments, manage stable isotope...

2020-04-15 | MTBLS1375 | MetaboLights

Lipidomics studies on NIDDK / NIST human plasma samples

Not available

ORGANISM(S): Homo sapiens

ST000004 | MetabolomicsWorkbench

The NIST silicon lattice comparator upgrade.

Not available

S-EPMC10594064 | biostudies-literature

Creation and Release of an Updated NIST DART-MS Forensics Database.

Not available

S-EPMC9720405 | biostudies-literature

Structure of the Fc fragment of the NIST reference antibody RM8671.

Not available

S-EPMC6130425 | biostudies-literature

Comparison of (14)C liquid scintillation counting at NIST and NRC Canada.

Not available

S-EPMC4937459 | biostudies-literature

Evaluation of Olink Reveal Proximity Extension Assay for High-Throughput Proteomics: A Case Study Using NIST SRM 1950 and Spike-In Protein Standards

Plasma proteomics has regained attention in recent years through advancements in mass spectrometry instrumentation and sample preparation, as well as new high-throughput affinity-based technologies. Here, we evaluate the analytical performance of the new Olink Reveal platform, a proximity extension ...

ORGANISM(S): Homo sapiens (Human)

2025-06-03 | PAD000009 | Pride

NIST Ion Trap Human Spectral Library.

NIST Ion Trap Human Spectral Library. NIST Ion Trap Human Spectral Library.

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2015-10-01 | MSV000079337 | MassIVE

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2451 Results

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