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ProteomicsLong noncoding RNA (lncRNA), smORF encoded polypeptides (SEPs), NONCODE database, enrichment, mass spectrometry
Many small open reading frames (smORFs) embedded in lncRNA transcripts have been shown to encode biologically functional polypeptides (smORFs-encoded polypeptides, SEPs) in different organisms. Despite significant advances in genomics, bioinformatics and proteomics that largely enabled the discovery...
ORGANISM(S): Homo sapiens (Human) Mus musculus (Mouse) 
2021-06-15 | PXD019486 | Pride
Noncode database Mass spectrometry Long noncoding rna (lncrna) Enrichment Smorf encoded polypeptides (seps) 
UnknownNONCODE 2016: an informative and valuable data source of long non-coding RNAs.
Not available
S-EPMC4702886 | biostudies-literature
UnknownNONCODE v7.0: updated lncRNA resource integrating scRNA-seq data encompassing immune baseline, development, and disease.
Not available
S-EPMC12807645 | biostudies-literature
UnknownNONCODEV5: a comprehensive annotation database for long non-coding RNAs.
Not available
S-EPMC5753287 | biostudies-literature
TranscriptomicsInvestigation of androgen-regulated lncRNAs in prostate cancer cells
Prostate cancer is the most common cancer in men and androgen receptor (AR) downstream signalings promote prostate cancer cell proliferation. To investigate the AR signaling, we performed directional RNA sequence analysis in AR positive prostate cancer cell line, LNCaP and VCaP. Using Noncode and GE...
ORGANISM(S): Homo sapiens 
2016-08-01 | E-GEOD-82223 | biostudies-arrayexpress
UnknownALDB: a domestic-animal long noncoding RNA database.
Not available
S-EPMC4390226 | biostudies-literature
UnknownNONCODEV6: an updated database dedicated to long non-coding RNA annotation in both animals and plants.
Not available
S-EPMC7779048 | biostudies-literature
UnknownNONCODEv4: exploring the world of long non-coding RNA genes.
Not available
S-EPMC3965073 | biostudies-literature
UnknownArgonaute--a database for gene regulation by mammalian microRNAs.
Not available
S-EPMC1347455 | biostudies-literature
UnknownLnc-EPB41-Protein Interactions Associated with Congenital Pouch Colon.
Not available
S-EPMC6163732 | biostudies-literature
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