Norm - OmicsDI

Show results for

Unknown (2483)
Transcriptomics (803)
Genomics (149)
Proteomics (75)
Metabolomics (12)
Genomic (1)
Clinical (1)
Methylation profiling (1)
Other (1)
Multiomics (1)

Organisms

Homo sapiens (346)
Mus musculus (216)
Arabidopsis thaliana (99)
Saccharomyces cerevisiae (30)
Rattus norvegicus (19)
Dictyostelium discoideum (10)
Caenorhabditis elegans (9)
Drosophila melanogaster (7)
Schizosaccharomyces pombe (6)
Sus scrofa (6)
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 (5)
Macaca mulatta (5)
Mycobacterium tuberculosis (5)
Bos taurus (5)
Danio rerio (5)
Gossypium hirsutum (3)
Spodoptera frugiperda (3)
Neurospora crassa (3)
Campylobacter jejuni (3)
Oryza sativa (3)
Nicotiana tabacum (3)
Synechocystis sp. PCC 6803 (2)
Oryzias latipes (2)
Macaca fascicularis (2)
Citrus sinensis (2)
Anopheles gambiae (2)
Ovis aries (2)
Anopheles merus (2)
Salmo trutta (2)
Aspergillus nidulans FGSC A4 (1)

Organisms

Arabidopsis thaliana (29)
Homo sapiens (17)
Mus musculus (7)
Rattus norvegicus (4)
Junonia coenia (3)
Lactiplantibacillus plantarum (3)
Gallus gallus (2)
Agabus ramblae (1)
Eutrema salsugineum (1)
Salmo trutta (1)
Macaca nemestrina (1)
Ischnura elegans (1)
Magallana gigas (1)
Ovis aries (1)
coral metagenome (1)
Oryzias latipes (1)
Danio rerio (1)
Oryza sativa Japonica Group (1)

Repository

biostudies-arrayexpress (778)
ENA (109)
geo (57)
pride (34)
MassIVE (31)
MetaboLights (12)
EGA (11)
iProX (5)
jPOST (2)
PAXDB (2)
dbGaP (1)
EVA (1)
PanoramaPublic (1)

Tissue

Cell culture (9)
Brain (4)
Blood plasma (3)
Cell line cell (3)
Blood cell (2)
Epithelial cell (2)
Blood serum (1)
Cell suspension culture (1)
Embryonic stem cell (1)
Feces (1)
Fibroblast (1)
Flower (1)
Immortal cell line cell (1)
Lung (1)
Macrophage (1)
Plant cell (1)
Primary cell (1)
Small intestine epithelium (1)
Sperm (1)
Spleen (1)
Testis (1)
Trophoblast (1)
Urine (1)

Disease

Reference (2)
Oligodendroglioma (1)
Non-diseased (1)
Colon carcinoma (1)
Temporal lobe epilepsy (1)
None (1)
Normal (1)
Breast cancer (1)
Attendance to colorectal screening programmes in previous non-responders (1)
Acute leukemia (1)
Leishmaniasis (1)
Lung cancer (1)
Parkinson's disease (1)
Severe COVID-19 (1)
Trypanosomiasis (1)

Technology Type

Mass Spectrometry (34)
Shotgun proteomics (21)
Mass spectrometry (9)
Affinity purification coupled with mass spectrometry proteomics (7)
Bottom-up proteomics (7)
Mass spectrometry assay (3)
Data-dependent acquisition (3)
Data-independent acquisition (3)
Affinity proteomics (2)
SWATH MS (2)
ILLUMINA, Illumina HiSeq 2500 (1)
Gel-based experiment (1)

Instrument Platform

Illumina NovaSeq 6000 (41)
Illumina HiSeq 2000 (20)
Illumina HiSeq 4000 (18)
Illumina HiSeq 2500 (17)
NextSeq 500 (14)
Illumina MiSeq (5)
NextSeq 550 (5)
MouseWG-6_V2_0_R1_11278593_A (2)
454 GS FLX+ (2)
Agilent 2100 Bioanalyzer (2)
ScanArray 4000 [PerkinElmer] (2)
NextSeq 1000 (2)
Racham server on Uppmax, NAISS (2)
FACS Aria-III (2)
NextSeq 2000 (2)
Qubit 4 Fluorometer (1)
NextSeq 500, 75 bp single end lane (1)
C1000 Touch PCR thermal cycler (Bio-Rad) (1)
Real-time PCR Thermal Cycler (1)
Thermomixer (1)
Fluidigm C1 (1)
Nanodrop N1000 spectrophotometer (1)
ScanArray scanning hardware (1)
Illumina Genome Analyzer (1)
GenePix Personal 4100A [Axon Instruments] (1)
G2565AA DNA microarray scanner [Agilent] (1)
Illumina Genome Analyzer IIx (1)
Flow Cytometer (1)
Illumina NovaSeq X (1)
NA (1)

Publication Date

2013 (92)
2012 (89)
2014 (87)
2015 (75)
2010 (75)
2011 (73)
2008 (67)
2007 (57)
2016 (53)
2020 (39)
2025 (31)
2023 (27)
2009 (24)
2022 (23)
2021 (23)
2024 (21)
2019 (17)
2026 (13)
2017 (10)
2018 (8)
2005 (7)
2006 (3)
2004 (1)

UNIPROT ID/AC

1433B_SOYBN (2)
1433D_SOYBN (2)
6DCS_SOYBN (2)
A1YZE0_SOYBN (2)
A5I866_SOYBN (2)
A5JUQ4_SOYBN (2)
A5JVZ7_SOYBN (2)
A5Z2K3_SOYBN (2)
A7BIC9_SOYBN (2)
A7X657_SOYBN (2)
A7XZJ7_SOYBN (2)
A9CPA7_SOYBN (2)
A9QNE4_SOYBN (2)
ACCD_SOYBN (2)
ACT3_SOYBN (2)
AKR1_SOYBN (2)
AMYB_SOYBN (2)
AOX3_SOYBN (2)
ATPB_SOYBN (2)
ATPE_SOYBN (2)
ATPF_SOYBN (2)
B0M195_SOYBN (2)
B0M196_SOYBN (2)
B0M1A0_SOYBN (2)
B0M1A4_SOYBN (2)
B0M1A6_SOYBN (2)
B0M1A9_SOYBN (2)
B0M1B1_SOYBN (2)
B1ACD3_SOYBN (2)
B1ACD5_SOYBN (2)

CHEBI ID

CHEBI:27897 (2)
CHEBI:30769 (2)
CHEBI:138900 (1)
CHEBI:64598 (1)
CHEBI:64596 (1)
CHEBI:64595 (1)
CHEBI:64589 (1)
CHEBI:64588 (1)
CHEBI:64584 (1)
CHEBI:60430 (1)
CHEBI:18303 (1)
CHEBI:77359 (1)
CHEBI:28494 (1)
CHEBI:16337 (1)
CHEBI:134435 (1)
CHEBI:57865 (1)
CHEBI:58115 (1)
CHEBI:60377 (1)
CHEBI:456215 (1)
CHEBI:28874 (1)
CHEBI:39251 (1)
CHEBI:72352 (1)
CHEBI:67408 (1)
CHEBI:142436 (1)
CHEBI:142428 (1)
CHEBI:142427 (1)
CHEBI:75489 (1)
CHEBI:142426 (1)
CHEBI:72528 (1)
CHEBI:72523 (1)

Metabolite Name

N-acetyl-dl-glutamic acid (2)
Met-Phe (2)
Thr-Glu (2)
4-Propylphenol (2)
Caftaric acid (2)
Pheophorbide a (2)
Miglitol (2)
3-Hydroxysuberic acid (2)
3-Dehydroquinic acid (2)
L-Proline (2)
9(S)-HOTrE (2)
Hydroquinone (2)
Glucose 1-phosphate (2)
Sebacic acid (2)
DG(PGF1alpha/0:0/15:0) (1)
PE(PGF1alpha/22:4(7Z,10Z,13Z,16Z)) (1)
Methyl 5-(methoxymethyl)-4,5-dimethyl-2-oxofuran-3-carboxylate (1)
Nx2 toxin (1)
2-(3-hexyl-4-methyl-2,5-dioxopyrrol-1-yl)-3-hydroxybutanoic acid (1)
7-methyl-2-(4-pyrimidin-2-ylpiperazin-1-yl)-7,8-dihydro-6H-quinazolin-5-one (1)
(2R)-2-Amino-4-(amino-butyl-oxo-lambda6-sulfanylidene)butanoic acid (1)
2-((3-ethoxy-3-oxopropanoyl)oxy)-n,n,n-trimethylethan-1-aminium (1)
N-phenyl-N'-(2-{[5-(4-pyridinyl)-1,3,4-oxadiazol-2-yl]sulfanyl}acetyl)urea (1)
1,2,2,6,6-pentamethylpiperidin-4-ol (1)
Met-Gly-Tyr (1)
7-hydroxychroman-2-one (1)
N-(Cyclohexylmethyl)-3-{[5-(phenoxymethyl)-1,2-oxazol-3-yl]methyl}-3-oxetanamine (1)
2-Methyl-3-(1,4,5,6-tetrahydronicotinoyl)pyrazolo(1,5-a)pyridine (1)
Ile-Asn-Ser (1)
4-formylaminoantipyrine (1)

First Public Date

2014 (40)
2026 (12)
2025 (10)
2020 (10)
2024 (8)
2017 (6)
2021 (5)
2023 (4)
2019 (4)
2015 (3)
2022 (2)
2018 (2)
2016 (2)
2013 (1)

Modification

4x(2)H labeled dimethylated residue (1)

Study status

Recruiting (1)

Study type

Transcription profiling by array (449)
RNA-seq of coding RNA (130)
RNA-seq of coding RNA from single cells (36)
Other (22)
ChIP-seq (17)
Unknown experiment type (15)
RNA-seq of non coding RNA (13)
ChIP-chip by tiling array (11)
Comparative genomic hybridization by array (11)
Cell line - High-throughput sequencing (9)
DNA-seq (7)
Methylation profiling by array (7)
RNA-seq of total RNA (7)
CLIP-seq (6)
Transcription profiling by RT-PCR (4)
ATAC-seq (4)
Human - High-throughput sequencing (3)
ChIP-chip by array (3)
CUT&RUN (3)
Animal - One-color microarray (2)
CLIP-Seq (2)
Animal - High-throughput sequencing (2)
RIP-seq (2)
MicroRNA profiling by array (2)
Methylation profiling by high throughput sequencing (2)
Transcription profiling by SAGE (1)
Cell line - One-color microarray (1)
RNAi profiling by array (1)
Genotyping by array (1)
MicroRNA profiling by high throughput sequencing (1)

Release Date

2022 (345)
2023 (309)
2024 (283)
2021 (280)
2020 (259)
2025 (247)
2019 (194)
2016 (159)
2014 (148)
2013 (147)
2015 (143)
2018 (120)
2017 (117)
2012 (114)
2010 (97)
2011 (91)
2008 (75)
2009 (42)
2026 (37)
2007 (32)
2006 (10)
2005 (7)
2001 (2)
2004 (1)
2002 (1)
1998 (1)

Lab affiliation

1 Institute of Marine Sciences, Spanish National Research Council (CSIC), 08003 Barcelona, Spain 2 Institute of Biotechnology and Biomedicine (IBB), Universitat Autònoma de Barcelona, 08193 Bellaterra (Cerdanyola del Vallès), Spain (1)
Agathe Subtil UMR3691 CNRS Cellular Biology of Microbial Infection Institut Pasteur 25, rue du Dr Roux 75015 Paris, France (1)
Bioanalytical Mass Spectrometry Group, Max Planck Institute for Multidisciplinary Sciences, 37077 Göttingen, Germany. (1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands (1)
CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, 1090 Vienna, Austria (1)
Centre for Regenerative Medicine School of Biological Sciences University of Edinburgh 5 Little France Drive Edinburgh, EH16 4UU UK (1)
Claudia Fecher-Trost Experimental and Clinical Pharmacology and Toxicology, Center for Molecular Signaling (PZMS), Saarland University, Buildings 46, D-66421 Homburg, Germany (1)
College of Animal Science and Technology, Shandong Agricultural University, Taian, Shandong, 271001, P. R. China. (1)
Department of Chemistry and Biochemistry University of Bern Switzerland (1)
Department of Chemistry, University of Zurich, 8057 Zurich, Switzerland. (1)
Department of Genome Sciences, University of Washington, Seattle, WA, USA (1)
Divisions of Hematology and Oncology, The Children’s Hospital of Philadelphia, University of Pennsylvania, Perelman School of Medicine (1)
Executive Director Cancer Research, Peter MacCallum Cancer Centre. Head, The Sir Peter MacCallum Department of Oncology, The University of Melbourne. (1)
Functional Cellular Networks Section, Laboratory of Immune System Biology, NIAID, NIH (1)
Functional Genomics Center Zurich (1)
Head of Department of Proteomics and Signal Transduction, Max Planck Institute of Biochemistry (1)
Inst. f. Molekulare Systembiologie Otto-Stern-Weg 3 8093 Zürich Switzerland (1)
Institut Pasteur (1)
Institute of Molecular Systems Medicine, Goethe University Frankfurt (1)
Institute of Physiology II Universität Freiburg Germany (1)
Interactomics, RNA and Immunity Laboratory, Institut Pasteur, 75015 Paris, France (1)
Leibniz Institute on Aging - Fritz Lipmann Institute (FLI), Jena, Germany (1)
Max Delbrück Center for Molecular Medicine Berlin and Charite Berlin (1)
Max Delbrück Center for Molecular Medicine in the Helmholtz Association (1)
Max Planck Institute for Brain Research Max Planck Institute of Biophysics (1)
Membrane Traffic and Cell Division Lab, Institut Pasteur, UMR3691, CNRS, 25–28 rue du Dr Roux, F-75015 Paris, France (1)
Microbial Individuality and Infection Group, Institut Pasteur, Paris, France (1)
Plasticité cellulaire et modélisation des maladies, CNRS UMR 3738, Institut Pasteur, Paris, France (1)
Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry of the Russian Academy of Sciences (1)
Thoracic Oncology Moffitt Cancer Center Tampa, FL, USA (1)

Location

Italy (1)

3528 Results

Show results for

Organisms

Organisms

Repository

Tissue

Disease

Technology Type

Instrument Platform

Publication Date

UNIPROT ID/AC

CHEBI ID

Metabolite Name

First Public Date

Modification

Study status

Study type

Release Date

Lab affiliation

Location

Tags

OmicsDI is part of the ELIXIR infrastructure

Tweets