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GenomicsAPCDR AGV Project: WGS of South African Zulu
The African Genome Variation Project (AGVP) provides a resource to help design, implement and interpret genomic studies in sub-Saharan Africa (SSA) and worldwide. The AGVP represents dense genotypes from 1,481 and whole genome sequences (WGS) from 320 individuals across SSA. As part of the AGVP we ...
EGAS00001000286 | EGA
GenomicsAPCDR AGV Project: WGS of an Ugandan population
The African Genome Variation Project (AGVP) provides a resource to help design, implement and interpret genomic studies in sub-Saharan Africa (SSA) and worldwide. The AGVP represents dense genotypes from 1,481 and whole genome sequences (WGS) from 320 individuals across SSA. As part of the AGVP we ...
EGAS00001000363 | EGA
GenomicsAPCDR AGV Project: The African Genome Variation Project(dense array genotyping data)
The African Genome Variation Project (AGVP) aims to provide a global resource to understand population diversity and help design, implement and interpret genomic studies in sub-Saharan Africa (SSA), and worldwide. The AGVP represents dense genotyping data on 1,481 individuals from 18 ethno-linguisti...
EGAS00001000959 | EGA
GenomicsAPCDR AGV Project: Whole genome sequencing of 3 African populations (curated data)
The African Genome Variation Project (AGVP) provides a resource to help design, implement and interpret genomic studies in sub-Saharan Africa (SSA) and worldwide. The AGVP represents dense genotypes from 1,481 and whole genome sequences (WGS) from 320 individuals across SSA. As part of the AGVP we s...
EGAS00001000960 | EGA
GenomicsEGAS00001000286-sc-20140910 - samples
Low depth (4x) Illumina HiSeq raw sequence data for 100 unrelated Zulu from Durban area, South Africa.
EGAD00001001007 | EGA
GenomicsEGAS00001000960-sc-20151110 - samples
Low coverage (4x-8x) Illumina HiSeq curated sequence data from 3 African populations from the AGV project; 100 Baganda from Uganda (4x), 100 Zulu from South Africa (4x), and 120 Gumuz, Wolayta, Oromo, Somali and Amhara from Ethiopia (8x). Pre-processed, jointly called and filtered with GATK, refined...
EGAD00001001663 | EGA
GenomicsAPCDR AGV Fula
APCDR AGV Project: Array data from 74 Fula
EGAD00010001054 | EGA
GenomicsEGAS00001000363-sc-20140910 - samples
Low depth (4x) Illumina HiSeq raw sequence data for 100 unrelated Baganda from rural Uganda.
EGAD00001001008 | EGA
GenomicsAPCDR AGV Jola
APCDR AGV Project: Array data from 79 Jola. Raw data, intensity files and post-QC Plink files.
EGAD00010001048 | EGA
GenomicsAPCDR AGV Kikuyu
APCDR AGV Project: Array data from 99 Kikuyu. Raw data, intensity files and post-QC Plink files.
EGAD00010001049 | EGA
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