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ProteomicsAnalysis of oak stem lesions in Acute Oak Decline using shotgun proteomics
Acute Oak Decline (AOD) is a decline-disease currently spreading in Britain, threatening oak trees. Here, we analyze and compare the proteomes of inner bark tissue sampled from oak stems of trees symptomatic with AOD and non-symptomatic trees.
ORGANISM(S): Quercus petraea Quercus robur 
2018-02-07 | PXD004991 | Pride
Acute oak decline Metaproteomics Oak stem 
TranscriptomicsTranscriptional profiling of the rust fungus Cronartium quercuum f. sp. fusiforme (Cqf) during vegetative growth on 2 different hosts.
The purpose of this study was to make a single comparison between Cqf genes expressed during the vegetative stages of infection on the telial host (oak leaf) versus the aecial host (pine stem). A large proportion of genes were expressed in both hosts and significantly differentially expressed genes ...
ORGANISM(S): Cronartium quercuum 
2013-10-25 | E-GEOD-51655 | biostudies-arrayexpress
GenomicsIllumina RNA-seq for bud, leaf and stem of California Valley Oak, Quercus lobata (SW786)
Illumina RNA-seq for bud, leaf and stem of California Valley Oak, Quercus lobata (SW786)
PRJNA731859 | ENA
TranscriptomicsThe impact of drought on phellem development: morpho-physiological adaptations and gene expression dynamics in cork oak stems
This work aimed to characterize the molecular adaptations occurring in cork oak (Quercus suber) stems in adaptation to drought, and identify key genetic pathways regulating phellem development. One-year-old cork oak plants were grown for additional 6 months under well-watered (WW) or water-deficit (...
ORGANISM(S): Quercus suber 
2024-04-29 | E-MTAB-13376 | biostudies-arrayexpress
UnknownDirected Differentiation of Human Pluripotent Stem Cells to Microglia.
Not available
S-EPMC5470097 | biostudies-literature
TranscriptomicsIllumina RNA-seq for bud, leaf and stem of California Valley Oak, Quercus lobata (SW786)
STAR aligned RNA-seq reads were used as one of many guides informing gene model annotation of the Valley Oak genome sequence.
ORGANISM(S): Quercus lobata 
2021-05-22 | GSE174828 | GEO
GenomicsPacBio Iso-Seq transcriptome for California Valley Oak, Quercus lobata (SW786)
PacBio Iso-Seq transcriptome for California Valley Oak, Quercus lobata (SW786)
PRJNA731858 | ENA
UnknownNectar in oak savannas: implications for butterfly conservation.
Not available
S-EPMC11982782 | biostudies-literature
UnknownOak genome reveals facets of long lifespan.
Not available
S-EPMC6086335 | biostudies-literature
UnknownMicrobiome and infectivity studies reveal complex polyspecies tree disease in Acute Oak Decline.
Not available
S-EPMC5776452 | biostudies-literature
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