Om - OmicsDI

Show results for

Unknown (8085)
Transcriptomics (1023)
Genomics (419)
Proteomics (174)
Metabolomics (14)
Clinical (5)
Other (3)
Models (1)
Methylation profiling (1)
Multiomics (1)

Organisms

Homo sapiens (471)
Mus musculus (264)
Saccharomyces cerevisiae (44)
Rattus norvegicus (44)
Arabidopsis thaliana (37)
Drosophila melanogaster (27)
Danio rerio (17)
Caenorhabditis elegans (12)
Sus scrofa (12)
Bos taurus (8)
Schizosaccharomyces pombe (7)
Drosophila simulans (6)
Bacillus subtilis (6)
Streptomyces venezuelae (6)
Solanum lycopersicum (6)
Drosophila yakuba (5)
Drosophila pseudoobscura (5)
Oryza sativa (5)
Gallus gallus (5)
Escherichia coli (5)
Synechocystis sp. PCC 6803 (4)
Yersinia pseudotuberculosis (4)
Medicago truncatula (4)
Zea mays (4)
Corynebacterium glutamicum ATCC 13032 (4)
Macaca mulatta (4)
Mesorhizobium huakuii 7653R (3)
Candidatus Phytoplasma asteris (3)
Bombyx mori (3)
Listeria monocytogenes EGD-e (3)

Organisms

Homo sapiens (38)
Mus musculus (19)
Dichomitus squalens (18)
Rattus norvegicus (5)
Canis lupus familiaris (4)
soil metagenome (3)
Moraxella catarrhalis (2)
Solanum lycopersicum (2)
Sus scrofa (2)
sediment metagenome (2)
Streptomyces sp. OM5714 (1)
Acetonema longum (1)
Pyrus hybrid rootstock (1)
Francisella endosymbiont of Ornithodoros moubata (1)
Nitratireductor sp. OM-1 (1)
Leptospira interrogans serovar Manilae str. UP-OM (1)
Francisella-like endosymbiont (1)
Tulasnella sp. FT061 (1)
Tulasnella sp. WO97 (1)
Enchytraeus albidus (1)
Caulobacter vibrioides (1)
Methanofollis (1)
Escherichia coli str. K-12 substr. MG1655 (1)
Escherichia coli BW25113 (1)
Caulobacter vibrioides NA1000 (1)
Mycobacterium tuberculosis OM-V02_005 (1)
Bacillus halotolerans (1)
Macaca fascicularis (1)
Medicago truncatula (1)
Ovis aries (1)

Repository

biostudies-arrayexpress (1109)
ENA (239)
pride (138)
geo (60)
EGA (38)
MassIVE (20)
MetaboLights (12)
iProX (6)
jPOST (6)
PanoramaPublic (3)
GNPS (2)
GPMDB (2)
BioModels (1)

Tissue

Cell culture (23)
Epithelial cell (9)
Saliva (4)
Cerebrospinal fluid (3)
Colon (3)
Permanent cell line cell (3)
Stem cell (3)
Blood (2)
Blood plasma (2)
Corneal endothelial cell (2)
Lens (2)
Plant cell (2)
Testis (2)
Aortic valve (1)
B cell (1)
Blood cancer cell (1)
Bloodstream form (1)
Bone cancer cell line (1)
Bone marrow (1)
Brain (1)
Brain cancer cell line (1)
Breast cancer cell (1)
Breast cancer cell line (1)
Cecum cancer cell line (1)
Cell suspension culture (1)
Cervical cancer cell line (1)
Cervical carcinoma cell (1)
Colonic cancer cell (1)
Colorectal cancer cell line (1)
T cell (1)

Disease

Disease free (8)
Breast cancer (7)
Colon cancer (6)
Not Available (2)
Cardiovascular system disease (2)
Cystic fibrosis (2)
Guillain-Barre syndrome (2)
Mucositis (2)
Non-small cell lung cancer xenograft tumor (1)
Keratoconus (1)
Breast carcinoma (1)
Normal (1)
Malignant neoplasm of colon, unspecified (1)
Inflammatory Bowel Diseases (1)
Carcinoma (1)
Metastatic colorectal cancer (1)
Colorectal Neoplasms (1)
Allergic asthma (1)
Aortic valve stenosis (1)
Bone osteosarcoma (1)
Centronuclear myopathy (1)
Cervix carcinoma (1)
Crohn's disease (1)
Cryptosporidiosis (1)
Infertility (1)
Leptospirosis (1)
Malignant neoplasm of ovary (1)
Melanoma (1)
Neurodegenerative disease (1)
Obesity (1)

Technology Type

Mass Spectrometry (138)
Shotgun proteomics (89)
Bottom-up proteomics (24)
SWATH MS (12)
Mass spectrometry (10)
Data-dependent acquisition (8)
Gel-based experiment (8)
Data-independent acquisition (5)
Mass spectrometry imaging (4)
HDMSE (3)
Mass spectrometry assay (2)
Affinity purification coupled with mass spectrometry proteomics (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
MSE (2)
Illumina ChIP-Sequencing, Illumina MBD-Sequencing, Illumina beadarray, Illumina HiSeq 2500, Illumina MiSeq, Illumina Bisulfite-Sequencing (1)
ABI_SOLID, Illumina Genome Analyzer IIx, Affymetrix_GenomeWide_SNP6.34 (1)
Illumina MiSeq (1)
Illumina Genome Analyzer II (1)
Affinity proteomics (1)
All-ion fragmentation (1)
DiaPASEF (1)
Glycoproteomics (1)
Top-down proteomics (1)

Instrument Platform

Q Exactive (10)
Liquid Chromatography MS - positive - reverse phase (7)
Illumina HiSeq 2500 (5)
Illumina NovaSeq 6000 (4)
TripleTOF 5600 (4)
Liquid Chromatography MS - negative - reverse phase (4)
Illumina HiSeq 2000 (3)
NextSeq 500 (3)
NextSeq 550 (2)
Illumina HiSeq 4000 (2)
Instrument (2)
LTQ Orbitrap Velos (2)
Orbitrap Fusion (2)
Orbitrap Fusion Lumos (2)
Q Exactive HF (2)
Dell PowerEdge 630 with Intel Xeon E5-2630 processor (8 cores 16 threads) and 94 GB memory running CentOS Linux release 7.5.1804. (1)
Solexa 2G Genome Analyzer (1)
G2565BA DNA Scanner (1)
Illumina Genome Analyzer II (1)
Illumina HiSeq 1500 (1)
LTQ (Thermo Scientific instrument model) (1)
Q Exactive HF-X (1)
Synapt G2 HDMS (1)
TSQ Quantum (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography Tandem MS (LC-MS/MS) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - alternating - reverse phase (1)

Publication Date

2014 (349)
2013 (289)
2012 (195)
2011 (104)
2015 (55)
2010 (52)
2022 (45)
2025 (40)
2023 (26)
2024 (25)
2016 (24)
2021 (21)
2020 (20)
2019 (19)
2009 (19)
2017 (17)
2008 (14)
2018 (11)
2026 (11)
2007 (8)
2006 (3)
2005 (2)
2004 (1)
2003 (1)

UNIPROT ID/AC

P04637 (1)
Q00987 (1)

CHEBI ID

CHEBI:16610 (6)
CHEBI:28044 (6)
CHEBI:18186 (5)
CHEBI:6650 (5)
CHEBI:28794 (5)
CHEBI:27266 (5)
CHEBI:18107 (5)
CHEBI:29016 (5)
CHEBI:16919 (5)
CHEBI:27897 (5)
CHEBI:30769 (5)
CHEBI:71464 (4)
CHEBI:28527 (4)
CHEBI:27386 (4)
CHEBI:545687 (4)
CHEBI:17822 (4)
CHEBI:25094 (4)
CHEBI:18237 (4)
CHEBI:17126 (4)
CHEBI:22653 (4)
CHEBI:28300 (4)
CHEBI:73713 (4)
CHEBI:17802 (4)
CHEBI:15676 (4)
CHEBI:73580 (4)
CHEBI:17562 (4)
CHEBI:24898 (4)
CHEBI:25017 (4)
CHEBI:15428 (4)
CHEBI:16196 (4)

Metabolite Name

Azelaic acid (4)
(R)-3-hydroxybutyrylcarnitine (3)
Cinnamic acid (3)
Hexose (3)
Leu-pro (3)
Trans-Anethole (3)
L-Theanine (3)
N-Acetylvaline (3)
FAD (3)
Spermidine (3)
Valine (3)
Eriodictyol (3)
Benzoic acid (3)
5-hydroxy-4-methoxy-5,6-dihydro-2H-pyran-2-one (3)
Xanthosine (3)
Docosahexaenoic acid (3)
Arachidonic acid (3)
Traumatic acid (3)
Ectoine (3)
Phenylalanine (3)
Oleic acid (3)
Dodecanedioic acid (3)
Adenine (3)
Zearalenone (3)
Uridine (3)
Creatine (3)
Tryptophan (3)
3-Methylene-3H-indole (2)
CoA-glutathione (2)
Sulfurol (2)

First Public Date

2026 (30)
2024 (29)
2017 (28)
2020 (26)
2023 (22)
2025 (21)
2019 (17)
2021 (16)
2014 (14)
2022 (11)
2016 (7)
2015 (7)
2018 (6)
2013 (5)

Modelling Approach

Ordinary differential equation model (1)

Study status

Active, not recruiting (2)
Not provided (1)
Recruiting (1)
Completed (1)

Lab affiliation

The Wilmer Eye Institute, Johns Hopkins University School of Medicine, Baltimore, Maryland 21287 USA (8)
Radboud university medical center, Radboud Institute for Health Sciences, Department of Hematology The Netherlands (3)
Biognosys AG (2)
Biognosys AG, Schlieren, Schweiz (2)
North Carolina State University (2)
Princeton University (2)
Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry of the Russian Academy of Sciences (2)
1 Bioanalytics, Institute of Biotechnology, Technische Universität Berlin, 13355 Berlin, Germany 2 Wellcome Centre for Cell Biology, School of Biologic Sciences, University of Edinburgh, Edinburgh EH9 3BF, Scotland, United Kingdom (1)
1 Department of Medicine - Western Health, The University of Melbourne, Melbourne, Australia The Australian Institute for Musculoskeletal Science (AIMSS), Western Health, Victoria University and The University of Melbourne, Melbourne, Australia 3 Institute for Health and Sport, Victoria University, Melbourne, Australia (1)
Analytical Chemistry Lab, Istituto Italiano di Tecnologia, Via Morego 30, 16163, Genova, Italy (1)
Astbury Centre for Structural Molecular Biology, Faculty of Biological Sciences, University of Leeds, Leeds, LS2 9JT, United Kingdom (1)
Astbury Centre for Structural Molecular Biology, School of Molecular and Cellular Biology, Faculty of Biological Sciences, University of Leeds, Leeds, LS2 9JT, United Kingdom (1)
Bavarian Center for Biomolecular Mass Spectrometry, Freising, TU Munich (1)
Biochemistry & Systems Biology, Universiy of Liverpool, UK (1)
Biosciences Institute, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, United Kingdom (1)
Brigham and Women's Hospital (1)
CECAD Research Center, University of Cologne ,Institute of Genetics, Cologne, Germany (1)
Cambridge Centre for Proteomics, Department of Biochemistry, University of Cambridge, Tennis Court Road, Cambridge, UK (1)
Cancer Research UK Cambridge Institute, University of Cambridge, Robinson Way, Cambridge, CB2 0RE, UK (1)
CeMM - Research Center for Molecular Medicine of the Austrian Academy of Sciences (1)
Center for Interdisciplinary Cardiovascular Sciences, Division of Cardiovascular Medicine, Department of Medicine, Brigham Women's Hospital, Harvard Medical School, Boston, MA, United States (1)
Centre scientifique de Monaco, Monaco (1)
Chemistry Department, University of Zurich, Zurich, Switzerland (1)
Children’s Medical Research Institute, Faculty of Medicine and Health, The University of Sydney, Westmead, NSW 2145, Australia (1)
Departamento de Bioquímica, Escola Paulista de Medicina, Universidade Federal de São Paulo, São Paulo, 04023-901, Brazil; Laboratório Especial de Toxinologia Aplicada, Center of Toxins, Immune-Response and Cell Signaling, Instituto Butantan, São Paulo, 05503-900, Brazil (1)
Department of Biochemistry and Functional Proteomics, Institute of Biology II, Faculty of Biology and BIOSS Centre for Biological Signalling Studies, University of Freiburg, 79104 Freiburg im Breisgau, Germany (1)
Department of Biochemistry, University of Cambridge, Cambridge, UK (1)
Department of Biochemistry, University of Cambridge, UK (1)
Department of Biochemistry, University of Oxford, Oxford, United Kingdom (1)
Department of Chemistry, University of Oxford (1)