Oncorhynchus mykiss

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Unknown (797)
Genomics (550)
Transcriptomics (364)
Proteomics (39)
Metabolomics (13)
Methylation profiling (3)
Other (1)

Organisms

Oncorhynchus mykiss (385)
Salmo salar (103)
Oncorhynchus tshawytscha (41)
Coregonus clupeaformis (38)
Osmerus mordax (38)
Andropogon gerardi (28)
Bacteria (28)
Oncorhynchus nerka (9)
Danio rerio (6)
Xenopus laevis (3)
Salmo trutta (3)
Gasterosteus aculeatus (2)
Homo sapiens (2)
Oncorhynchus kisutch (2)
Salvelinus fontinalis (2)
Esox lucius (1)
Oncorhynchus masou masou (1)
Bos taurus (1)
Coturnix japonica (1)
Fundulus heteroclitus (1)
Lithobates pipiens (1)
Mus musculus (1)
Oncorhynchus clarkii (1)
Oncorhynchus gorbuscha (1)
Oryzias latipes (1)
Phalacrocorax auritus (1)
Pimephales promelas (1)
Salmo trutta fario (1)
Sparus aurata (1)
salmonid fish (1)

Organisms

Oncorhynchus mykiss (321)
Piscirickettsia salmonis (6)
Oncorhynchus clarkii lewisi x Oncorhynchus mykiss (4)
Oncorhynchus mykiss mykiss (3)
Oncorhynchus mykiss gairdneri (3)
fish gut metagenome (3)
fish metagenome (3)
Weissella ceti NC36 (1)
Chryseobacterium sp. FP211-J200 (1)
Pseudomonas sp. P42 (1)
Viral hemorrhagic septicemia virus (1)
Saprolegnia sp. salmon/trout/2012 (1)
Streptococcus phocae subsp. salmonis (1)
Gyrodactylus salaris (1)
Pseudomonas sivasensis (1)
Aeromonas bestiarum (1)
Infectious hematopoietic necrosis virus (1)
Weissella tructae (1)
Oncorhynchus tshawytscha (1)
Flavobacterium psychrophilum (1)
Lactococcus petauri (1)
Vibrio anguillarum (1)
pond metagenome (1)
Pediococcus acidilactici (1)
Lactococcus cremoris (1)
Salmo salar (1)
freshwater metagenome (1)
Gasterosteus aculeatus (1)
gut metagenome (1)
Danio rerio (1)

Repository

ENA (526)
geo (279)
biostudies-arrayexpress (110)
pride (28)
MetaboLights (10)
MassIVE (5)
EVA (3)
PanoramaPublic (3)
iProX (2)
MetabolomicsWorkbench (2)
GNPS (1)
PAXDB (1)

Tissue

Blood plasma (4)
Liver (4)
Blood (2)
Brain (2)
Heart (2)
Whole body (2)
Blood (1)
Blood cell (1)
Bone (1)
Ciliary body (1)
Egg (1)
Epithelial cell (1)
Fibroblast (1)
Kidney (1)
Myxospore (1)
Oocyte (1)
Ovarian fluid (1)
Seminal plasma (1)
Skin (1)
Small intestine mucosa (1)
Spermatozoon (1)
Spleen (1)

Technology Type

Mass Spectrometry (30)
Shotgun proteomics (21)
Mass spectrometry (6)
Bottom-up proteomics (6)
Mass spectrometry assay (3)
ESI (2)
Gel-based experiment (2)
NMR spectroscopy (1)
Data-independent acquisition (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (6)
Illumina NovaSeq 6000 (4)
Q Exactive HF-X (4)
- (2)
Q Exactive (2)
VersArray ChipReader [Bio-Rad Laboratories] (1)
Not applicable (1)
Illumina HiSeq 2500 (1)
Illumina HiSeq X Ten (1)
Varian (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS - negative - reverse-phase (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2010 (46)
2013 (40)
2012 (39)
2021 (27)
2009 (24)
2022 (23)
2015 (23)
2023 (20)
2024 (20)
2008 (19)
2018 (18)
2011 (18)
2026 (17)
2014 (17)
2007 (17)
2020 (15)
2016 (11)
2005 (10)
2006 (9)
2019 (9)
2017 (8)
2025 (7)
2004 (3)

UNIPROT ID/AC

A0A060PIE3_ONCMY (1)
A0A060VLZ9_ONCMY (1)
A0A060VM28_ONCMY (1)
A0A060VM33_ONCMY (1)
A0A060VM37_ONCMY (1)
A0A060VM44_ONCMY (1)
A0A060VM58_ONCMY (1)
A0A060VM68_ONCMY (1)
A0A060VM74_ONCMY (1)
A0A060VM94_ONCMY (1)
A0A060VMC3_ONCMY (1)
A0A060VMD1_ONCMY (1)
A0A060VMD6_ONCMY (1)
A0A060VME0_ONCMY (1)
A0A060VMG6_ONCMY (1)
A0A060VMH9_ONCMY (1)
A0A060VMI7_ONCMY (1)
A0A060VMK2_ONCMY (1)
A0A060VMK5_ONCMY (1)
A0A060VML0_ONCMY (1)
A0A060VML4_ONCMY (1)
A0A060VMM0_ONCMY (1)
A0A060VMM4_ONCMY (1)
A0A060VMN5_ONCMY (1)
A0A060VMP3_ONCMY (1)
A0A060VMQ7_ONCMY (1)
A0A060VMQ9_ONCMY (1)
A0A060VMR5_ONCMY (1)
A0A060VMS4_ONCMY (1)
A0A060VMT6_ONCMY (1)

CHEBI ID

CHEBI:35038 (3)
CHEBI:16359 (3)
CHEBI:28865 (3)
CHEBI:195271 (2)
CHEBI:143757 (2)
CHEBI:182784 (2)
CHEBI:143745 (2)
CHEBI:139138 (2)
CHEBI:34494 (2)
CHEBI:173703 (2)
CHEBI:64563 (2)
CHEBI:75342 (2)
CHEBI:27997 (2)
CHEBI:34687 (2)
CHEBI:73858 (2)
CHEBI:80774 (2)
CHEBI:27432 (2)
CHEBI:181874 (1)
CHEBI:195266 (1)
CHEBI:195267 (1)
CHEBI:195269 (1)
CHEBI:75567 (1)
CHEBI:195270 (1)
CHEBI:195265 (1)
CHEBI:195272 (1)
CHEBI:191103 (1)
CHEBI:181126 (1)
CHEBI:195264 (1)
CHEBI:25640 (1)
CHEBI:195263 (1)

Metabolite Name

Tris(2-butoxyethyl) phosphate (3)
Cholic acid (3)
Alpha-linolenic acid|linolenic acid|(9Z,12Z,15Z)-octadeca-9,12,15-trienoic acid (2)
1-({[2-(2-furylmethyl)-5-methylpyrrolidinyl]amino}methylene)-7-[8-({[2-(2-fury lmethyl)pyrrolidinyl]amino}methylene)-1,6-dihydroxy-3-methyl-5-(methylethyl)-7 -oxo(2-naphthyl)]-3,8-dihydroxy-6-methyl-4-(methylethyl)naphthalen-2-one (2)
Dibutyl phthalate (DBP) (2)
NCGC00385123-01_C22H30O6_7b,9-Dihydroxy-3-(hydroxymethyl)-1,1,6,8-tetramethyl-5-oxo-1,1a,1b,4,4a,5,7a,7b,8,9-decahydro-9aH-cyclopropa[3,4]benzo[1,2-e]azulen-9a-yl acetate (2)
2,6-Di-tert-butyl-4-hydroxymethylphenol (2)
Lyso-PC(16:0) (2)
(2S,3S,4S,5R,6R)-6-[[(3S,4S,6aR,6bS,8aR,9R,12aS,14bR)-9-hydroxy-4-(hydroxymethyl)-4,6a,6b,8a,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-5-[(2S,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxyoxane-2-carboxylic acid (2)
Monoolein (2)
Taurocholic acid (2)
1-Stearoyl-2-hydroxy-sn-glycero-3-phosphocholine (2)
9(10)-EpOME (2)
Elaidic acid (2)
NCGC00168953-02_C47H76O17_(3beta,5xi,9xi,22beta)-22,24-Dihydroxyolean-12-en-3-yl 6-deoxy-alpha-L-mannopyranosyl-(1->2)-alpha-L-arabinopyranosyl-(1->2)-beta-D-glucopyranosiduronic acid (1)
Sodium taurochenodeoxycholate (1)
(R)-4-((3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-3,7,12-trihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoic acid (1)
(R)-4-((3R,4R,5S,8S,9S,10R,13R,14S,17R)-3,4-dihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoic acid (1)
3beta-Hydroxy-5-cholenoic acid (1)
Lyso PC (22:6) (1)
Methyl (3R,4R,5R)-5-[(2R,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(E)-3-phenylprop-2-enoyl]oxyoxan-2-yl]oxy-3,4-dihydroxycyclohexene-1-carboxylate (1)
Propanoic acid, 3,3'-thiobis-, didodecyl ester (1)
2-((R)-4-((3R,5S,7S,8R,9S,10S,13R,14S,17R)-3,7-dihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanamido)ethane-1-sulfonic acid (1)
LU052302 Acetyl tributyl citrate|tributyl 2-acetyloxypropane-1,2,3-tricarboxylate (1)
Hexanedioic acid, bis(2-ethylhexyl) ester (1)
9-Octadecenamide, (Z)- (1)
Ethanol, 2-(2-butoxyethoxy)- (1)
2-((4R)-4-((3R,5R,6S,9S,10R,13R,14S,17R)-3,6-dihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanamido)ethane-1-sulfonic acid (1)
2-((R)-4-((3R,5S,7S,8R,9S,10S,12S,13R,14S,17R)-3,7,12-trihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanamido)ethane-1-sulfonic acid (1)
Diphenylphosphate|Diphenyl hydrogen phosphate (1)

First Public Date

2014 (101)
2024 (69)
2026 (60)
2021 (40)
2023 (37)
2022 (36)
2020 (35)
2025 (32)
2013 (27)
2017 (22)
2015 (20)
2018 (18)
2019 (17)
2016 (12)

Classification

viruses (2)
bacteria (2)

Study type

Transcription profiling by array (90)
Unknown experiment type (8)
RNA-seq of coding RNA (4)
RNA-seq of total RNA (2)
Transcription profiling by SAGE (1)
Animal - One-color microarray (1)
Cell line - One-color microarray (1)
Animal - High-throughput sequencing (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of non coding RNA (1)

Release Date

2022 (103)
2021 (93)
2023 (75)
2025 (73)
2024 (73)
2020 (59)
2019 (51)
2018 (48)
2013 (42)
2010 (42)
2015 (41)
2016 (36)
2017 (35)
2012 (28)
2014 (27)
2011 (20)
2008 (17)
2026 (10)
2006 (9)
2007 (7)
2009 (6)
2005 (5)
2004 (2)
2003 (2)
2002 (1)
1999 (1)
1998 (1)

Lab affiliation

Clinical Division of Fish Medicine, University of Veterinary Medicine, Vienna, Austria (4)
Department of Gamete and Embryo Biology (2)
Institute of Aquaculture, University of Stirling (2)
Agricultural Center Baden-Württemberg, Fisheries Research Station, Germany (1)
Associate Professor & Lead, Biochemistry & Proteomics Group Department of Chemistry & Biomolecular Science, Clarkson University (1)
CIIMAR, Matosinhos, Portugal (1)
Centre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Øster Voldgade 5-7, 1350, Copenhagen, Denmark (1)
Centre of Marine Sciences (CCMAR), Portugal University of Algarve (UAlg), Portugal (1)
Department of Gametes and Embryo Biology, Institute of Animal Reproduction and Food Research, Polish Academy of Sciences (1)
Department of Immunotechnology, Hus 406, Medicon Village, Lund University, 223 81, Lund, Sweden (1)
Division of Fish Health Department of Farm Animals and Veterinary Public Health University of Veterinary Medicine Vienna Veterinaerplatz 1 1210 Vienna Austria (1)
Environmental Biochemistry Laboratory, Institute of Biology of the Karelian Research Centre of the Russian Academy of Sciences, Petrozavodsk, Russia (lab head) (1)
Facultad de Ciencias de la Vida, Universidad Andres Bello (1)
Faculty of Chemistry, Biotechnology and Food Science Norwegian University of Life Sciences, 1432, Ås Norway (1)
Faculty of Science, Ontario Tech University Oshawa, ON, Canada (1)
Marine Biology Department, The Leon H.Charney School of Marine Sciences, University of Haifa, Israel (1)
National Research Institute of Police Science (1)
Porto Conte Ricerche s.r.l., Alghero (SS), Italy (1)
Proteomics & Metabolomics Facility, Center for Open Research Resources & Equipment University of Connecticut Storrs, CT 06269 (1)
School of Biological Sciences, University of Aberdeen, United Kingdom (1)
Toxicology Center, University of Saskatchewan, Canada (1)
UR1037 – Laboratoire de Physiologie et Génomique des Poissons (LPGP), INRAE, France (1)
University of Jyväskylä Department of Biological and Environmental Science (1)

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Transcriptome-and metabolome-based mechanisms of high-temperature adaptation in triploid rainbow trout (Oncorhynchus mykiss)

High-temperature stress critically challenges cold-water aquaculture; however, the size-dependent molecular mechanisms underlying thermal adaptation in triploid rainbow trout (Oncorhynchus mykiss) remain poorly understood. Here, we integrated transcriptomic and metabolomic profiling of liver tiss...

2026-05-17 | MTBLS14507 | MetaboLights

Modulation of blood metabolites by dietary β–glucan in rainbow trout (Oncorhynchus mykiss) - Serum lipid concentrations

Not available