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Transcriptomics
(655)
Genomics
(630)
Unknown
(231)
Proteomics
(200)
Metabolomics
(12)
Other
(7)
Methylation profiling
(2)
Organisms
Homo sapiens
(294)
Oryctolagus cuniculus
(291)
Mus musculus
(282)
Drosophila melanogaster
(70)
Saccharomyces cerevisiae
(40)
Rattus norvegicus
(37)
Bos taurus
(35)
Gallus gallus
(23)
Ovis aries
(22)
Sus scrofa
(17)
Arabidopsis thaliana
(11)
Danio rerio
(11)
Vibrio cholerae
(7)
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
(6)
Schizosaccharomyces pombe
(6)
Callithrix jacchus
(5)
Zea mays
(4)
Streptomyces venezuelae
(4)
Salmonella enterica subsp. enterica serovar Typhimurium
(4)
Mycobacterium tuberculosis H37Rv
(4)
Geobacter sulfurreducens PCA
(3)
Klebsiella pneumoniae
(3)
Caenorhabditis elegans
(3)
Cryptococcus neoformans
(3)
Bombyx mori
(2)
Bordetella bronchiseptica
(2)
Oryza sativa
(2)
Bacillus subtilis
(2)
Anopheles gambiae
(2)
Staphylococcus aureus
(2)
Organisms
Oryctolagus cuniculus
(277)
Oryctolagus cuniculus cuniculus
(6)
Pseudomonas fragi
(2)
Lepus
(1)
Oryctolagus cuniculus algirus
(1)
Leporidae
(1)
rabbit gut metagenome
(1)
Ixodes ricinus
(1)
gut metagenome
(1)
Repository
biostudies-arrayexpress
(796)
ENA
(320)
geo
(212)
pride
(88)
MassIVE
(37)
iProX
(25)
jPOST
(11)
MetaboLights
(7)
EVA
(3)
MetabolomicsWorkbench
(3)
GNPS
(2)
PanoramaPublic
(2)
PAXDB
(1)
Tissue
Liver
(7)
Sperm
(6)
Heart
(5)
Retina
(4)
Blood serum
(4)
Tear
(3)
Vitreous humor
(3)
Spermatozoon
(3)
Cartilage
(3)
Embryo
(3)
Saliva
(3)
Cell culture
(3)
Conjunctiva
(2)
Iris
(2)
Sclera
(2)
Bone
(2)
Eye
(2)
Cornea
(2)
Placenta
(2)
Brain
(2)
Seminal plasma
(2)
Spleen
(2)
Permanent cell line cell
(2)
Blood cell
(2)
Blood
(2)
Muscle
(1)
Eye tissue
(1)
Blood
(1)
Central nervous system
(1)
Spermary
(1)
Disease
Normal
(7)
Infertility
(5)
Chronic myeloid leukemia
(2)
Neuroblastoma
(2)
Male infertility
(2)
Myopia
(2)
Cardiovascular system disease
(2)
Disease free
(2)
NTN
(1)
Carcinoma
(1)
Breast carcinoma
(1)
Retinal detachment
(1)
Drug dependence
(1)
Lyme disease
(1)
Schistosomiasis
(1)
Chagas disease
(1)
Atherosclerosis
(1)
Parkinson's disease
(1)
Technology Type
Mass Spectrometry
(91)
Shotgun proteomics
(43)
Bottom-up proteomics
(14)
Gel-based experiment
(11)
Chemical cross-linking coupled with mass spectrometry proteomics
(9)
Data-dependent acquisition
(8)
SWATH MS
(7)
Mass spectrometry
(5)
Affinity purification coupled with mass spectrometry proteomics
(5)
Data-independent acquisition
(4)
ESI
(3)
Top-down proteomics
(2)
NMR spectroscopy
(1)
Mass spectrometry assay
(1)
MSE
(1)
HDMSE
(1)
Instrument Platform
Illumina HiSeq 2500
(36)
Illumina HiSeq 4000
(27)
Illumina HiSeq 2000
(26)
NextSeq 500
(20)
Illumina NovaSeq 6000
(15)
Illumina MiSeq
(12)
NextSeq 550
(7)
Illumina Genome Analyzer IIx
(6)
Illumina HiSeq 1500
(5)
Illumina NovaSeq X
(3)
NextSeq 2000
(3)
AB 5500 Genetic Analyzer
(2)
GenePix 4000B [Axon Instruments]
(2)
Illumina Genome Analyzer II
(2)
Illumina HiSeq 1000
(2)
SnakePipes 3.4
(1)
NEBNext Ultra II DNA Library Prep Kit
(1)
Nanodrop 2000c spectrophotometer
(1)
Desktop
(1)
Bacteriological Laboratory
(1)
Quantseq FWD kit (Lexogen, Austria) was used to prepare libraries for NGS. Reverse transcription of RNA, amplification of libraries, quality control of libraries and purification were performed exactly as described in manual provided with kit.
(1)
RNAeasy kit
(1)
Cell culture lab
(1)
DNA 7500 Bioanalyzer Chips
(1)
Dell PowerEdge 630 with Intel Xeon E5-2630 processor (8 cores 16 threads) and 94 GB memory running CentOS Linux release 7.5.1804.
(1)
Tapestation
(1)
Genetix aQuire
(1)
None
(1)
Agilent Technologies hybridisation chamber and Agilent Technologies hybridisation oven
(1)
Agilent Technologies G2505C dual laser scanner
(1)
Publication Date
2013
(117)
2014
(108)
2015
(105)
2010
(93)
2012
(88)
2016
(73)
2011
(66)
2022
(61)
2021
(56)
2023
(52)
2025
(49)
2020
(48)
2026
(43)
2019
(43)
2024
(41)
2018
(33)
2017
(30)
2008
(24)
2009
(21)
2007
(9)
2006
(8)
2005
(1)
2004
(1)
UNIPROT ID/AC
G1SVB3_RABIT
(1)
A0A5F9C4L7_RABIT
(1)
G1TKE5_RABIT
(1)
G1T4D5_RABIT
(1)
G1U8G0_RABIT
(1)
G1SSN8_RABIT
(1)
G1T4N8_RABIT
(1)
G1SMH9_RABIT
(1)
G1U2A1_RABIT
(1)
G1U3Q6_RABIT
(1)
A0A5F9CGP0_RABIT
(1)
SAA2_RABIT
(1)
G1T2S0_RABIT
(1)
G1TDT3_RABIT
(1)
CPNS1_RABIT
(1)
G1T8H5_RABIT
(1)
G1TL08_RABIT
(1)
G1SZP6_RABIT
(1)
A0A5F9CNA2_RABIT
(1)
G1TKV1_RABIT
(1)
G1TSW8_RABIT
(1)
U3KM54_RABIT
(1)
G1SDU8_RABIT
(1)
G1SJQ2_RABIT
(1)
A0A5F9D7S5_RABIT
(1)
G1TEP2_RABIT
(1)
G1U207_RABIT
(1)
G1SPW1_RABIT
(1)
G1SN00_RABIT
(1)
G1TN29_RABIT
(1)
CHEBI ID
CHEBI:15366
(3)
CHEBI:17712
(3)
CHEBI:16828
(3)
CHEBI:17295
(3)
CHEBI:46961
(3)
CHEBI:17268
(3)
CHEBI:15354
(3)
CHEBI:17750
(3)
CHEBI:1148
(3)
CHEBI:16704
(3)
CHEBI:15428
(3)
CHEBI:15741
(3)
CHEBI:16737
(3)
CHEBI:16919
(3)
CHEBI:17368
(3)
CHEBI:16964
(2)
CHEBI:69438
(2)
CHEBI:28918
(2)
CHEBI:17847
(2)
CHEBI:28125
(2)
CHEBI:28315
(2)
CHEBI:2030
(2)
CHEBI:19065
(2)
CHEBI:16974
(2)
CHEBI:18202
(2)
CHEBI:27373
(2)
CHEBI:16294
(2)
CHEBI:18346
(2)
CHEBI:18135
(2)
CHEBI:17587
(2)
Metabolite Name
L-kynurenine
(2)
9H-xanthine
(2)
Phytosphingosine
(2)
Corticosterone
(2)
L-tryptophan
(2)
L-phenylalanine
(2)
Ornithine
(2)
Hypoxanthine
(2)
Uridine
(2)
Cresol
(1)
3-oxodecanoic acid
(1)
Cyclooctanemethanol
(1)
(E)-2-Decenal
(1)
Dodecane, 4-methyl-
(1)
4-[pyrrolidin-2-one-5-yl]-Butan-2-one
(1)
2-Decenal, (Z)-
(1)
2-Pentoxy-tetrahydropyran
(1)
2'-methyl-Propiophenone
(1)
N-ethyl-2-Furancarboxamide
(1)
Nonane, 5-methyl-5-propyl-
(1)
Decane, 3-ethyl-3-methyl-
(1)
Trans-3(10)-Caren-2-ol
(1)
(E)-3-Dodecene
(1)
2,8-dimethyl-Undecane
(1)
Cis-7-Decen-1-al
(1)
BenzAldehyde, 2,4-dimethyl-
(1)
Pyrazine, 2-methoxy-3-(2-methylpropyl)-
(1)
2-hydroxy-BenzAldehyde
(1)
6-Nonenoic acid, methyl ester
(1)
1-pentyl-Cyclohexene
(1)
First Public Date
2025
(44)
2026
(37)
2023
(35)
2014
(31)
2024
(30)
2020
(25)
2022
(22)
2021
(21)
2019
(18)
2017
(16)
2016
(14)
2018
(12)
2015
(8)
2013
(7)
Study type
ChIP-seq
(271)
Transcription profiling by array
(124)
ChIP-chip by tiling array
(103)
RNA-seq of coding RNA
(84)
ChIP-chip by array
(64)
Proteomic profiling by array
(22)
Methylation profiling by high throughput sequencing
(18)
RNA-seq of non coding RNA
(16)
Other
(14)
CUT&RUN
(11)
RIP-seq
(10)
Cell line - High-throughput sequencing
(6)
CLIP-seq
(6)
Comparative genomic hybridization by array
(6)
Unknown experiment type
(5)
Animal - High-throughput sequencing
(5)
Methylation profiling by array
(5)
Transcription profiling by tiling array
(4)
RNA-seq of coding RNA from single cells
(4)
Human - High-throughput sequencing
(3)
High-throughput sequencing
(2)
DNA-seq
(2)
RIP-chip by array
(1)
Animal - One-color microarray
(1)
CLIP-Seq
(1)
Trajectory
(1)
Genotyping by array
(1)
Antigen profiling
(1)
Spatial transcriptomics by high-throughput sequencing
(1)
ATAC-seq
(1)
Release Date
2013
(115)
2014
(113)
2015
(101)
2010
(101)
2012
(88)
2016
(75)
2011
(62)
2022
(42)
2021
(37)
2020
(34)
2019
(32)
2018
(32)
2009
(32)
2023
(29)
2017
(29)
2008
(24)
2024
(23)
2025
(22)
2007
(12)
2026
(11)
2006
(9)
2005
(2)
2004
(1)
2002
(1)
Lab affiliation
Laboratory of Biotechnology of Reproduction, Institute for Animal Science and Technology (ICTA), Universitat Politècnica de València, 46022 Valencia, Spain
(3)
Department of Molecular and Translational Oncology, Maria Sklodowska-Curie Memorial Cancer Center and Institute of Oncology; Warsaw, Poland
(2)
Instituto de Ciencia y Tecnologia Animal Universitat Politècnica de València Valencia, Spain
(2)
Instituto de Ciencia y Tecnología Animal, Universidad Politècnica de València, Valencia, Spain
(2)
Universität Heidelberg Medizinische Fakultät Im Neuenheimer Feld 307 69120 Heidelberg
(2)
University of Houston, Houston, TX 77204
(2)
Institute for Research in Immunology and Cancer (IRIC) Université de Montréal, Department of Chemistry, Université de Montréal, MIL campus, Montréal, H2V 0B3, Canada
(2)
ETH Zurich, Institute of Molecular Systems Biology, Zurich, Switzerland
(2)
Institute of Animal Reproduction and Food Research of Polish Academy of Sciences
(2)
Mass Spectrometry for Biology Unit, CNRS USR 2000, Institut Pasteur, Paris, France.
(1)
Laboratory of Molecular Biology, Intercollegiate Faculty of Biotechnology UG&MUG
(1)
Dr. Rolf M. Schwiete Osteoarthritis Research Unit, Department of Trauma Surgery and Orthopedics, University Hospital, Goethe University, Frankfurt, Germany
(1)
Department of Integration of Chinese and Western Medicine, School of Basic Medicine Science, Peking University, China
(1)
Department of Radiology Charité - Universitätsmedizin Berlin Charitéplatz 1 10117 Berlin Germany
(1)
Center for Systems and Synthetic Biology Institute for Cellular and Molecular Biology Department of Molecular Biosciences University of Texas at Austin
(1)
Forschunszentrum Jüich, Germany
(1)
Forschungszentrum Jülich, Germany
(1)
Johns Hopkins School of Medicine, Division of Cardiology
(1)
Mass Spectrometry Laboratory IBB PAS
(1)
Shanghai Veterinary Research Institute,Chinese Academy of Agricultural Sciences
(1)
PhD
(1)
Instituto Valenciano de Investigaciones Agrarias (IVIA), Polígono La Esperanza nº 100, 12400 Segorbe, Castellón, Spain
(1)
Institute of Molecular and Cell Biology, Agency for Science, Technology and Research, Singapore
(1)
Section for EvoGenomics, GLOBE Institute, University of Copenhagen, Denmark
(1)
Department of Veterinary Pathobiology College of Veterinary Medicine Texas A & M University College Station Texas USA ( lab head )
(1)
Groupe de recherche Metabolique (GRM), BCHM, Institut de Duve, Université Catholique de Louvain, Belgium
(1)
Instituto de Ciencia y Tecnologia Animal Iniversitat Politecnica de Valencia (UPV) Valencia, Spain
(1)
Instituto de Ciencia y Tecnologia Animal Universitat Politècnica de València (UPV) Valencia (Spain)
(1)
Max Planck Institute of Molecular Cell Biology and Genetics, Pfotenhauerstraße 108, 01307 Dresden, Germany
(1)
Harvard Medical School, Brigham and Women's Hospital
(1)
Tags
xref:PubMed:40461482
(3)
xref:PubMed:33221434
(3)
xref:PubMed:42625400
(3)
xref:PubMed:22968637
(2)
xref:PubMed:35841027
(2)
xref:PubMed:42266249
(2)
xref:PubMed:39329201
(2)
xref:PubMed:38448448
(2)
xref:PubMed:41287823
(2)
xref:PubMed:24226202
(1)
xref:PubMed:35372533
(1)
xref:PubMed:40781239
(1)
xref:PubMed:36497026
(1)
xref:PubMed:33308144
(1)
xref:PubMed:32503311
(1)
xref:PubMed:35985530
(1)
xref:PubMed:42002599
(1)
xref:PubMed:29785339
(1)
xref:PubMed:37228812
(1)
xref:PubMed:26207811
(1)
xref:PubMed:25402351
(1)
xref:PubMed:24097427
(1)
xref:PubMed:38282893
(1)
xref:PubMed:24444082
(1)
xref:PubMed:27594588
(1)
xref:PubMed:33529199
(1)
xref:PubMed:40593738
(1)
xref:PubMed:34662505
(1)
xref:PubMed:35417710
(1)
xref:PubMed:33098888
(1)
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Oryctolagus cuniculus cuniculus
Oryctolagus cuniculus cuniculus Assembly: OryCun3.0
PRJNA635554
|
ENA
Cite
Oryctolagus cuniculus
Oryctolagus cuniculus Genome sequencing
PRJNA832894
|
ENA
Cite
Oryctolagus cuniculus
Oryctolagus cuniculus Raw sequence reads
PRJNA751479
|
ENA
Cite
Oryctolagus cuniculus
Oryctolagus cuniculus Raw sequence reads
PRJNA773733
|
ENA
Cite
Oryctolagus cuniculus
Oryctolagus cuniculus Raw sequence reads
PRJNA531371
|
ENA
Cite
Oryctolagus cuniculus
Oryctolagus cuniculus Raw sequence reads
PRJNA1190119
|
ENA
Cite
Oryctolagus cuniculus
Oryctolagus cuniculus Raw sequence reads
PRJNA531523
|
ENA
Cite
Oryctolagus cuniculus
Oryctolagus cuniculus Raw sequence reads
PRJNA784157
|
ENA
Cite
Oryctolagus cuniculus
Oryctolagus cuniculus Genome sequencing and assembly
PRJNA1055669
|
ENA
Cite
Oryctolagus cuniculus
Oryctolagus cuniculus CPA1S282P mutation pancreas Transcriptome
PRJNA1250971
|
ENA
Cite
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