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TranscriptomicsEvaluation of the amplicons for SNP typing (allele bias) and locus bias using Illumina 550-Duo BeadChip
Highly specific amplification of complex DNA pools without bias or template-independent products (TIPs) remains a challenge. We have developed a procedure using phi29 DNA polymerase and trehalose and optimized control of amplification to create micrograms of specific amplicons without TIPs from down...
ORGANISM(S): Homo sapiens 
2010-06-25 | E-GEOD-12732 | biostudies-arrayexpress
TranscriptomicsSomatic copy-number mosaicism in human skin revealed by induced pluripotent stem cells (sequencing)
Reprogramming human somatic cells into induced pluripotent stem cells (iPSC) has been suspected of causing de novo copy number variations (CNVs). To explore this issue, we performed a whole-genome and transcriptome analysis of 20 human iPSC lines derived from primary skin fibroblasts of 7 individual...
ORGANISM(S): Homo sapiens 
2012-10-31 | E-GEOD-41716 | biostudies-arrayexpress
Transcriptomics8-chip high-resolution aCGH experiment NA15510 vs. NA18505
We introduce high-throughput and massive paired-end mapping (PEM), a large-scale genome sequencing method to identify SVs 3 kb or larger that combines the rescue and capture of paired-ends of 3 kb fragments, massive 454 Sequencing, and a computational approach to map DNA reads onto a reference genom...
ORGANISM(S): Homo sapiens 
2007-09-28 | E-GEOD-9002 | biostudies-arrayexpress
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