Panc1 cells - OmicsDI

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CHEBI ID

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Metabolite Name

N6-Threonyl-carbamoyl-adenosine (1)
1-Ribosyl-imidazolenicotinamide (1)
N2,N7-Dimethylguanosine (1)
N2,N2,N7-Trimethylguanosine (1)
5-Deoxy-5-methylthioadenosine (1)
5-Aminoimidazole-4-carboxamide-1-beta-D-ribofuranoside (1)
N1-Methylguanosine (1)
Taurolithocholic acid-3-sulfate (1)
PS(23:0_20:4) (1)
PS(22:4_18:0) (1)
PS(22:2_20:4) (1)
PS(21:2_20:4) (1)
PS(21:0_24:1) (1)
PS(21:0_22:6) (1)
PS(21:0_20:5) (1)
PS(21:0_20:4) (1)
PS(21:0_20:3) (1)
PS(21:0_20:2) (1)
PS(21:0_18:3) (1)
PS(21:0_18:2) (1)
PS(21:0_18:1) (1)
PS(21:0_17:1) (1)
PS(21:0_16:1) (1)
PS(20:4_20:4) (1)
PS(20:3_22:6) (1)
PS(20:3_22:4) (1)
PS(20:3_20:5) (1)
PS(20:3_20:4) (1)
PS(20:3_20:3) (1)
PS(20:2_22:4) (1)

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Study type

Transcription profiling by array (52)
RNA-seq of coding RNA (12)
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Release Date

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2012 (17)
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Lab affiliation

Department of Biochemistry and Molecular Biology and the Biomedicine Discovery Institute; Monash University; Clayton 3800; Victoria; Australia (3)
University of Wisconsin-Madison (2)
University of Verona (1)
Department of Cell Biology, Harvard Medical School, USA (1)
Department of Immunology & National Key Laboratory of Medical Molecular Biology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences (CAMS) & Peking Union Medical College, Beijing (1)
Full Professor of Systems Biology and Director of Computational Modelling Systems Biology Ireland, University College Dublin, Dublin, Ireland. Conway Institute of Biomolecular & Biomedical Research,University College Dublin, Dublin, Ireland. School of Medicine and Medical Science, University College Dublin, Dublin, Ireland. Department of Pharmacology, Yale University School of Medicine, New Haven, CT, USA (1)
Cell Biology Harvard Medical School Boston, MA 02115 (1)
Cold Spring Harbor Laboratory (1)
OncoProteomics Laboratory, Dept of Medical Oncology, VU University Medical Center, Amsterdam, The Netherlands (1)
Professor and Vice Chairman for Research Department of Biochemistry and Molecular Genetics Co-Leader, Experimental Therapeutics Program UAB O'Neal Comprehensive Cancer Center Hugh Kaul Human Genetics Building, Kaul 504A The University of Alabama at Birmingham Birmingham, Alabama (1)
Instituto de Investigaciones Sanitarias de Santiago de Compostela (1)
Vanderbilt University (1)
Amsterdam UMC, Vrije Universiteit Amsterdam, Medical Oncology, Cancer Center Amsterdam, OncoProteomics Laboratory, Amsterdam, Netherlands (1)

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PHF13 interacts with EZH2 in Panc1 cells

PRJNA746454 | ENA

RNA-seq in pancreatic cancer PANC1 cells

PRJNA542693 | ENA

Expression data from inflamed PANC1 cells

The effects of mutant p53 on TNFa stimulated PANC1 cells was tested. PANC1 cell harbor endogenous mutation in p53 (R273H). We knocked down this mutp53 (using sirna for p53) and then treated with low doses of TNFa to detect any differential transcription regulation governed by mutp53. A total of 7 sa...

ORGANISM(S): Homo sapiens

2013-01-26 | E-GEOD-43738 | biostudies-arrayexpress

GLI1 knock-down in Panc1 cells

Panc1 (human pancreatic adenocarcinoma cells) cells were transfected with control siRNA (targeting firefly luciferase, siLuc) or siRNA targeting GLI1 (siGLI1, Pool of four siRNAs). 72h following transfection, RNA was prepared for array analysis.

ORGANISM(S): Homo sapiens

2012-03-31 | E-MEXP-3379 | biostudies-arrayexpress

Expression analysis of Human pancreatic cancer cell line Panc1 pretreated with DMSO and Clofibrate.

Investigation of whole genome gene expression level changes of Panc1 pretreated with Clofibrate, compared to Panc1 pretreated with DMSO. Compare differentially expressed genes by analyzing mRNA profilings between DMSO and Clofibrate pretreating Panc1 cell.

ORGANISM(S): Homo sapiens

2015-06-09 | E-GEOD-69650 | biostudies-arrayexpress

Effect of DHODH inhibitor on gene expression in Panc1 cells

PRJNA911817 | ENA

Unravelling altered RNA metabolism in pancreatic cancer cells by liquid-chromatography coupling to ion mobility mass spectrometry

Ion mobility coupling to mass spectrometry facilitates an increase of resolution and chromatographic peak-capacity. Further coupling to liquid chromatography results in multi-dimensional analytical methods, especially suitable for complex matrices with structurally similar compounds. Modified nucleo...

2019-05-16 | MTBLS812 | MetaboLights

Expression data of Panc1 cells treated with romidepsin and tamoxifen

PRJNA756574 | ENA

Effect of ARNT on hypoxic response in Panc1 cells

PRJNA1427132 | ENA

Gene expression profiling of CAPAN2 and PANC1 with knockdown of MLL4

Lentivirus carrying shRNAs targeting MLL4 was transduced into CAPAN2 and PANC1 cells. Gene expression affected by the knockdown of MLL4 in PDAC cell lines will be revealed.

ORGANISM(S): Homo sapiens

2020-05-31 | E-MTAB-9073 | biostudies-arrayexpress

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