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Unknown
(1177)
Transcriptomics
(45)
Genomics
(11)
Proteomics
(7)
Metabolomics
(6)
Other
(1)
Organisms
Mus musculus
(18)
Homo sapiens
(12)
Solanum tuberosum
(4)
Heliconius erato etylus x Heliconius himera
(2)
Rattus norvegicus
(2)
Bos indicus
(2)
Arabidopsis thaliana
(2)
Bathyergus suillus
(1)
Spodoptera exigua
(1)
Fusarium oxysporum
(1)
Macaca mulatta
(1)
Marchantia polymorpha subsp. polymorpha
(1)
Schistosoma mansoni
(1)
Bos taurus
(1)
Saccharomyces cerevisiae
(1)
Danio rerio
(1)
Escherichia coli
(1)
Organisms
Escherichia coli
(1)
Homo sapiens
(1)
Repository
biostudies-arrayexpress
(50)
MetaboLights
(6)
PAXDB
(3)
ENA
(3)
geo
(2)
jPOST
(2)
MassIVE
(2)
EGA
(1)
EVA
(1)
pride
(1)
Tissue
Heart
(1)
Disease
Breast cancer
(1)
Technology Type
Mass spectrometry
(5)
Mass spectrometry assay
(1)
Mass Spectrometry
(1)
Shotgun proteomics
(1)
Instrument Platform
Illumina NovaSeq 6000
(5)
NextSeq 500
(2)
Q Exactive
(2)
Gas Chromatography MS - positive
(2)
Liquid Chromatography MS - negative - reverse phase
(2)
Liquid Chromatography MS - positive - reverse phase
(2)
PromethION
(1)
Solexa 2G Genome Analyzer
(1)
Illumina HiSeq 1500
(1)
Illumina HiSeq 4000
(1)
Illumina MiSeq
(1)
Gas Chromatography MS -
(1)
Liquid Chromatography MS - alternating - direct infusion
(1)
Liquid Chromatography MS - negative - hilic
(1)
Liquid Chromatography MS - negative - reverse-phase
(1)
Liquid Chromatography MS - positive - hilic
(1)
Liquid Chromatography MS - positive - reverse-phase
(1)
Publication Date
2025
(8)
2014
(7)
2012
(7)
2015
(6)
2013
(6)
2026
(5)
2010
(5)
2011
(4)
2008
(3)
2022
(3)
2021
(2)
2019
(2)
2016
(2)
2009
(2)
2007
(2)
2018
(1)
2020
(1)
2024
(1)
UNIPROT ID/AC
14331_SOLTU
(3)
14332_SOLTU
(3)
14335_SOLTU
(3)
4113.PGSC0003DMT400001418
(3)
4113.PGSC0003DMT400003947
(3)
4113.PGSC0003DMT400005135
(3)
4113.PGSC0003DMT400005136
(3)
4113.PGSC0003DMT400005427
(3)
4113.PGSC0003DMT400006164
(3)
4113.PGSC0003DMT400009751
(3)
4113.PGSC0003DMT400013958
(3)
4113.PGSC0003DMT400015957
(3)
4113.PGSC0003DMT400016201
(3)
4113.PGSC0003DMT400022438
(3)
4113.PGSC0003DMT400027147
(3)
4113.PGSC0003DMT400027379
(3)
4113.PGSC0003DMT400029003
(3)
4113.PGSC0003DMT400031900
(3)
4113.PGSC0003DMT400034164
(3)
4113.PGSC0003DMT400035006
(3)
4113.PGSC0003DMT400035007
(3)
4113.PGSC0003DMT400038109
(3)
4113.PGSC0003DMT400040121
(3)
4113.PGSC0003DMT400040182
(3)
4113.PGSC0003DMT400041662
(3)
4113.PGSC0003DMT400043254
(3)
4113.PGSC0003DMT400045338
(3)
4113.PGSC0003DMT400047686
(3)
4113.PGSC0003DMT400051640
(3)
4113.PGSC0003DMT400051919
(3)
CHEBI ID
CHEBI:17295
(3)
CHEBI:30769
(3)
CHEBI:14314
(2)
CHEBI:15603
(2)
CHEBI:15746
(2)
CHEBI:16643
(2)
CHEBI:16704
(2)
CHEBI:16828
(2)
CHEBI:16914
(2)
CHEBI:17015
(2)
CHEBI:17053
(2)
CHEBI:17191
(2)
CHEBI:17203
(2)
CHEBI:17895
(2)
CHEBI:17992
(2)
CHEBI:28527
(2)
CHEBI:29069
(2)
CHEBI:33508
(2)
CHEBI:9188
(2)
CHEBI:10123
(1)
CHEBI:116314
(1)
CHEBI:1294
(1)
CHEBI:131855
(1)
CHEBI:132838
(1)
CHEBI:133221
(1)
CHEBI:133561
(1)
CHEBI:133634
(1)
CHEBI:134418
(1)
CHEBI:134473
(1)
CHEBI:135782
(1)
Metabolite Name
L-Leucine
(4)
L-Methionine
(4)
L-Proline
(4)
L-Tryptophan
(4)
1,4-Ipomeadiol
(3)
Adenine
(3)
Citric acid
(3)
Glycerophosphocholine
(3)
L-Glutamine
(3)
L-Histidine
(3)
L-Isoleucine
(3)
L-Lysine
(3)
L-Phenylalanine
(3)
L-Threonine
(3)
L-Tyrosine
(3)
L-Valine
(3)
Linoleamide
(3)
Sucrose
(3)
(R)-2-Hydroxysterculic acid
(2)
(S)-10,16-Dihydroxyhexadecanoic acid
(2)
(S,E)-Zearalenone
(2)
1,2-Benzoquinone
(2)
13-Hydroxy-9-methoxy-10-oxo-11-octadecenoic acid
(2)
16-Hydroxy-10-oxohexadecanoic acid
(2)
2-Aminomuconic acid semialdehyde
(2)
2-Linoleoyl Glycerol
(2)
2-n-Propyl-4-oxopentanoic acid
(2)
28-Homobrassinolide
(2)
4-Hydroxybenzaldehyde
(2)
5-Aminopentanoic acid
(2)
First Public Date
2018
(1)
2014
(1)
2013
(1)
Classification
bacteria
(1)
Study type
Transcription profiling by array
(23)
RNA-seq of coding RNA
(10)
ChIP-seq
(4)
Unknown experiment type
(2)
Transcription profiling by tiling array
(2)
Transcription profiling by SAGE
(1)
Cell line - High-throughput sequencing
(1)
Comparative genomic hybridization by array
(1)
ATAC-seq
(1)
DNA-seq
(1)
Methylation profiling by array
(1)
RNA-seq of coding RNA from single cells
(1)
RNA-seq of non coding RNA
(1)
Release Date
2021
(173)
2023
(157)
2022
(150)
2025
(143)
2024
(120)
2020
(112)
2019
(63)
2018
(56)
2015
(42)
2016
(39)
2017
(37)
2014
(33)
2013
(24)
2026
(18)
2012
(11)
2011
(9)
2010
(7)
2008
(7)
2007
(6)
2009
(5)
2001
(4)
2006
(3)
2004
(3)
2000
(2)
2005
(1)
2003
(1)
2002
(1)
Lab affiliation
Division of Cardiology, Department of Medicine; Columbia University, Vagelos College of Physicians and Surgeons, 622 West 168th Street, New York, NY 10032. Department of Pharmacology and Molecular Signaling, Columbia University, Vagelos College of Physicians and Surgeons
(1)
Tags
xref:PubMed:21235772
(1)
xref:PubMed:29769381
(1)
xref:PubMed:21778360
(1)
pathogen:bacterium
(1)
pathogen
(1)
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Clinical, Molecular, and Genetic Characteristics of PAPA Syndrome: A Review.
Not available
S-EPMC3048314
|
biostudies-literature
Cite
Heterologous expression of pediocin/papA in Bacillus subtilis.
Not available
S-EPMC9148482
|
biostudies-literature
Cite
Production of p-amino-L-phenylalanine (L-PAPA) from glycerol by metabolic grafting of Escherichia coli.
Not available
S-EPMC6148955
|
biostudies-literature
Cite
Analysis of the F antigen-specific papA alleles of extraintestinal pathogenic Escherichia coli using a novel multiplex PCR-based assay.
Not available
S-EPMC97319
|
biostudies-literature
Cite
Crystal structure of the P pilus rod subunit PapA.
Not available
S-EPMC1868955
|
biostudies-literature
Cite
Talk to PAPA: A Systematic Review of Patient/Participant (PAPA) Feedback on Interactions With Community Health Workers Using a Depth Analysis Approach.
Not available
S-EPMC6884075
|
biostudies-literature
Cite
Pyrin binds the PSTPIP1/CD2BP1 protein, defining familial Mediterranean fever and PAPA syndrome as disorders in the same pathway.
Not available
S-EPMC263843
|
biostudies-literature
Cite
Clinical and Genetic Findings of the First Report of PAPA Syndrome in Brazil.
Not available
S-EPMC8687813
|
biostudies-literature
Cite
Adolescents' behavioral and neural responses to e-cigarette advertising.
Not available
S-EPMC5636647
|
biostudies-literature
Cite
Ongoing horizontal and vertical transmission of virulence genes and papA alleles among Escherichia coli blood isolates from patients with diverse-source bacteremia.
Not available
S-EPMC98646
|
biostudies-literature
Cite
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