Park Jung J - OmicsDI

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Unknown (2523)
Proteomics (41)
Transcriptomics (11)
Metabolomics (6)
Genomics (2)

Organisms

Homo sapiens (29)
Mus musculus (10)
Oryza sativa Japonica Group (2)
Ogataea angusta (1)
Gallus gallus (1)
Drosophila melanogaster (1)
Akkermansia muciniphila ATCC BAA-835 (1)
Caenorhabditis elegans (1)
Mus (1)
Octopus vulgaris (1)
Oryza sativa (1)

Repository

pride (31)
biostudies-arrayexpress (13)
MassIVE (7)
MetaboLights (5)
jPOST (2)
GNPS (1)
PeptideAtlas (1)

Tissue

Cell culture (4)
Blood serum (3)
Brain (3)
Epithelial cell (3)
Cell suspension culture (2)
Kidney (2)
Leaf (2)
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Blood cell (1)
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Tibialis anterior (1)

Disease

Alzheimer's disease (2)
Disease free (2)
Pancreatic cancer (2)
Bladder adenocarcinoma (1)
Lymphoma (1)
Stage IV colorectal cancer (1)
Stomach cancer (1)

Technology Type

Mass Spectrometry (31)
Shotgun proteomics (17)
Bottom-up proteomics (5)
Affinity purification coupled with mass spectrometry proteomics (4)
Mass spectrometry (3)
Data-dependent acquisition (3)
Gel-based experiment (3)
NMR spectroscopy (2)
Data-independent acquisition (1)
SRM/MRM (1)
SWATH MS (1)

Instrument Platform

LTQ Orbitrap Velos (2)
Orbitrap Fusion (2)
Q Exactive (2)
Liquid Chromatography MS - negative - reverse phase (2)
Liquid Chromatography MS - positive - reverse phase (2)
LTQ (2)
Xevo G2 Q-Tof (1)
LTQ Orbitrap Elite (1)
Orbitrap Fusion Lumos (1)
Q Exactive Plus (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - alternating - hilic (1)
Nuclear Magnetic Resonance (NMR) (1)
Nuclear Magnetic Resonance (NMR) - (1)

Publication Date

2023 (7)
2025 (6)
2016 (5)
2024 (5)
2022 (5)
2010 (4)
2026 (4)
2013 (3)
2020 (3)
2017 (3)
2019 (3)
2021 (2)
2018 (2)
2015 (1)
2014 (1)
2012 (1)
2007 (1)
2011 (1)
2006 (1)

UNIPROT ID/AC

A0A075B6P5 (1)
A0A087WT59 (1)
A0A087WTX5 (1)
A0A087WVW2 (1)
A0A087WVZ5 (1)
A0A087WXI0 (1)
A0A087WYL9 (1)
A0A087X130 (1)
A0A087X1V9 (1)
A0A0A0MS07 (1)
A0A0A0MS51 (1)
A0A0B4J1V0 (1)
A0M8Q6 (1)
A0N5G5 (1)
A0N7J6 (1)
A2BFH1 (1)
A2IPH7 (1)
A2IPI2 (1)
A2IPI5 (1)
A2J422 (1)
A2J423 (1)
A2N011 (1)
A2NB46 (1)
A2NI60 (1)
A2NKM6 (1)
A2NUT2 (1)
A2NXP9 (1)
A2NYQ9 (1)
A2NYV1 (1)
A2NZ55 (1)

ENSEMBL ID

ENSG00000147251 (1)
ENSG00000170477 (1)

CHEBI ID

CHEBI:15354 (4)
CHEBI:15741 (3)
CHEBI:27897 (3)
CHEBI:15366 (2)
CHEBI:15428 (2)
CHEBI:15756 (2)
CHEBI:15891 (2)
CHEBI:16449 (2)
CHEBI:16857 (2)
CHEBI:17126 (2)
CHEBI:17170 (2)
CHEBI:17750 (2)
CHEBI:17754 (2)
CHEBI:17992 (2)
CHEBI:18019 (2)
CHEBI:18139 (2)
CHEBI:18186 (2)
CHEBI:25017 (2)
CHEBI:27266 (2)
CHEBI:29016 (2)
CHEBI:32816 (2)
CHEBI:37084 (2)
CHEBI:37154 (2)
CHEBI:78320 (2)
CHEBI:1148 (1)
CHEBI:116314 (1)
CHEBI:133670 (1)
CHEBI:134270 (1)
CHEBI:135234 (1)
CHEBI:141588 (1)

Metabolite Name

1-Methylnicotinamide (1)
2-Hydroxybutyrate (1)
2-Hydroxyisobutyrate (1)
2-Oxoisocaproate (1)
2-Phenylpropionate (1)
3-Hydroxyisovalerate (1)
3-Indoxylsulfate (1)
3-Methyl-2-oxovalerate (1)
4-Hydroxyphenylacetate (1)
Acetate (1)
Acetone (1)
Alanine (1)
Allantoin (1)
Beta-Sitosterol (1)
Betaine (1)
Campesterol (1)
Carnitine (1)
Cholesterol (1)
Choline (1)
Citrate (1)
Creatine (1)
Creatinine (1)
D-ribose (1)
Dimethylamine (1)
Formate (1)
Fumarate (1)
Glucose (1)
Glycerol (1)
Glycine (1)
Guanidoacetate (1)

Modification

15.994915 (1)
57.021464 (1)

Study type

Unknown experiment type (3)
Transcription profiling by array (3)
RNA-seq of coding RNA (3)
Methylation profiling by high throughput sequencing (2)
Transcription profiling by MPSS (1)
Comparative genomic hybridization by array (1)

Release Date

2025 (363)
2022 (340)
2023 (315)
2021 (293)
2024 (290)
2020 (220)
2019 (169)
2018 (117)
2016 (88)
2017 (86)
2015 (72)
2026 (55)
2014 (50)
2013 (26)
2012 (18)
2010 (11)
2011 (11)
2009 (4)
2007 (2)
2008 (2)
2006 (2)
2004 (1)
2002 (1)

Lab affiliation

Proteomics core facility, Biomedical Research Institute, Seoul National University Hospital (3)
Proteomics and Metabolomics Core Facility, Biomedical Research Institute, Seoul National University Hospital (2)
Apoptosis and Molecular Disease Lab, Department of Biological Sciences, Seoul National University (1)
Assistant professor, School of Biological Sciences, Seoul National University (1)
Center for Advanced Biomolecular Recognition, Biomedical Research Institute, Korea Institute of Science and Technology (1)
Center for Advanced Biomolecular Recognition, Korea Institute of Science and Technology (1)
Center for Theragnosis, Korea Institute of Science and Technology, Republic of Korea (1)
Center for Theragnosis, Korea Institute of Science and Technology, Seoul, Korea (1)
Department of Applied Chemistry College of Applied Sciences, Kyung Hee University (1)
Department of Chemistry, Korea University (1)
Department of Internal Medicine, School of Medicine, Kyungpook National University, Kyungpook National University Hospital, Daegu, Republic of Korea (1)
Department of Life Science and Environmental Biochemistry, Life and Industry Convergence Research Institute, Pusan National University, Miryang 50463, Republic of Korea (1)
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, 50463, Republic of Korea (1)
Department of Plant Bioscience, Pusan National University, Miryang 50463, South Korea (1)
Department of molecular biotechnonlogy (1)
Epithelial Systems Biology Laboratory Systems Biology Center Division of Intramural Research National Heart, Lung and Blood Institute Building 10, Room 6N307 Bethesda, Maryland 20895-1603 (1)
Graduate School of Medical Science and Engineering, Korea Advanced Institute for Science and Technology (KAIST), Daejeon, 34141, Korea (1)
Group for Biometrology, Korea Research Institute of Standards and Science (KRISS), Daejeon, 34113, Republic of Korea (1)
Instituto de Acuicultura Torre de la Sal (IATS-CSIC), 12595 Ribera de Cabanes, Castellón, Spain (1)
Integrated Metabolomics Research Group, Western Seoul Center, Korea Basic Science Institute, Republic of Korea (1)
Kyung Hee University (1)
National Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health, Bethesda, MD, USA (1)
Proteomics core facility, Biomedical Research Institute, Seoul National University Hospital, 101 Daehak-ro, Seoul, Korea (1)
School of Biological Sciences, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul 08826, Korea (1)
Seoul National University (1)
Sequence database group (1)
Singapore Immunology Network (SIgN), Agency for Science, Technology and Research, Singapore 138648, Singapore (1)
Yonsei Proteome Research Center (1)

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TIMP3 is a CLOCK-dependent diurnal gene that inhibits the expression of UVB-induced inflammatory cytokines in human keratinocytes.

Not available

S-EPMC5892724 | biostudies-literature

Clusterin/apolipoprotein J attenuates angiotensin II-induced renal fibrosis.

Not available

S-EPMC4141810 | biostudies-literature

Short-term changes in the serum metabolome after laparoscopic sleeve gastrectomy and Roux-en-Y gastric bypass

INTRODUCTION: Bariatric surgery is known to be the most effective treatment for weight loss in obese patients and for the rapid remission of obesity-related comorbidities. These short-term improvements result from not only limited digestion or absorption but also dynamic changes ...

2022-03-17 | MTBLS2472 | MetaboLights

Role of jeotgal, a Korean traditional fermented fish sauce, in microbial dynamics and metabolite profiles during kimchi fermentation

We investigated the effects of jeotgal (fermented fish sauce) on kimchi fermentation, with or without saeu-jeot and myeolchi-jeot. Bacterial community analysis showed that Leuconostoc, Weissella, Lactobacillus, and Tetragenococcus were the dominant genera; however, their succession depended on the p...

2019-02-07 | MTBLS654 | MetaboLights

A critical role for ceramide synthase 2 in liver homeostasis: II. insights into molecular changes leading to hepatopathy.

Not available

S-EPMC2856297 | biostudies-literature

Transcriptome profiling of Hansenula polymorpha in response to sulfur starvation and cadmium stress

Transcriptome profiling analysis of the Hansenula polymorpha MET4 gene deletion strain have been carried out to obtain comprehensive information on the HpMet4p-mediated regulatory networks in association with the cadmium (Cd) detoxification and sulfur regulation in H. polymorpha. Total RNA samples w...

ORGANISM(S): Ogataea angusta

2014-07-31 | E-GEOD-31197 | biostudies-arrayexpress

Upregulation of Potassium Voltage-Gated Channel Subfamily J Member 2 Levels in the Lungs of Patients with Idiopathic Pulmonary Fibrosis.

Not available

S-EPMC7061125 | biostudies-literature

Weekly docetaxel and gemcitabine in previously treated metastatic esophageal squamous cell carcinoma.

Not available

S-EPMC4394089 | biostudies-literature

Additional record of Tuponia Reuter (Heteroptera, Miridae, Phylinae) from Korea, with a new synonym and discussion on distribution.

Not available

S-EPMC10214021 | biostudies-literature

Wound healing induced by new synthetic peptide, A7-1, in C57BL/6 mouse model.