Park S D SD - OmicsDI

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Transcriptomics (28)
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Mus musculus (10)
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Human immunodeficiency virus type 1 3916-CRO (3)
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NEWT:12924 (3)
Selenomonas sputigena ATCC 35185 (3)
Delftia acidovorans SPH-1 (3)
Cellulomonas gilvus ATCC 13127 (3)
Coprococcus comes ATCC 27758 (3)
Myxococcus xanthus DZ2 (3)
Roseibaca calidilacus (3)
Streptomyces griseorubens (3)
Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456 (3)
Allostigmatella aurantiaca DW4/3-1 (3)
Cyanobacterium stanieri (3)
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Acidiphilium cryptum JF-5 (3)
Xylanibacter ruminicola 23 (3)
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unidentified (1)
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Candida albicans (1)
Arabidopsis thaliana (1)

Repository

biostudies-arrayexpress (31)
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pride (3)

Tissue

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Disease

Normal (1)
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Technology Type

Mass spectrometry (5)
Mass Spectrometry (3)
Shotgun proteomics (3)
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Q Exactive (2)
Liquid Chromatography MS - negative - reverse phase (2)
Liquid Chromatography MS - positive - reverse phase (2)
GenePix 4200A (1)
Axon- GenePix4000B (1)
Illumina NovaSeq 6000 (1)
Nuclear Magnetic Resonance (NMR) - (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2012 (6)
2010 (5)
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2013 (3)
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2009 (2)
2008 (2)
2025 (2)
2024 (2)
2015 (1)
2007 (1)
2006 (1)
2021 (1)
2019 (1)

CHEBI ID

CHEBI:15724 (4)
CHEBI:15727 (4)
CHEBI:16919 (4)
CHEBI:16737 (4)
CHEBI:17268 (4)
CHEBI:17750 (4)
CHEBI:15891 (4)
CHEBI:60943 (3)
CHEBI:70959 (3)
CHEBI:17287 (3)
CHEBI:40410 (3)
CHEBI:18295 (3)
CHEBI:18323 (3)
CHEBI:64032 (3)
CHEBI:61695 (3)
CHEBI:16040 (3)
CHEBI:20607 (3)
CHEBI:17775 (3)
CHEBI:15350 (3)
CHEBI:17754 (3)
CHEBI:75034 (3)
CHEBI:26806 (3)
CHEBI:60645 (3)
CHEBI:16530 (3)
CHEBI:16552 (3)
CHEBI:28747 (3)
CHEBI:88494 (3)
CHEBI:28865 (3)
CHEBI:22470 (3)
CHEBI:17562 (3)

Metabolite Name

S-methylcysteine (2)
Fructosyllysine (2)
Creatine phosphate (2)
Corticosterone (2)
C-glycosyltryptophan (2)
Beta-muricholate (2)
3-hydroxypalmitoylcarnitine (2)
3-hydroxyoleoylcarnitine (2)
3-hydroxydecanoylcarnitine (2)
3-hydroxydecanoate (2)
3-hydroxyadipate (2)
1-stearoyl-2-oleoyl-GPE (18:0/18:1) (2)
1-oleoyl-GPI (18:1) (2)
1-myristoyl-2-palmitoyl-GPC (14:0/16:0) (2)
1-lignoceroyl-GPC (24:0) (2)
(R)-3-hydroxybutyrylcarnitine (2)
Urea (2)
Taurocyamine (2)
Tauro-beta-muricholate (2)
Ribitol (2)
Nicotinamide N-oxide (2)
Malonylcarnitine (2)
Arabitol/xylitol (2)
Tauroursodeoxycholate (2)
Taurodeoxycholate (2)
Taurocholate (2)
Taurochenodeoxycholate (2)
Stearoyl ethanolamide (2)
Stearidonate (18:4n3) (2)
Sphingosine (2)

Study type

Transcription profiling by array (20)
RNA-seq of coding RNA (4)
ChIP-chip by tiling array (2)
ChIP-seq (2)
Transcription profiling by RT-PCR (1)
Comparative genomic hybridization by array (1)
Proteomic profiling by array (1)

Release Date

2025 (130)
2021 (112)
2022 (110)
2024 (107)
2023 (99)
2020 (82)
2018 (58)
2019 (53)
2017 (51)
2016 (44)
2015 (31)
2014 (25)
2013 (23)
2012 (18)
2026 (18)
2011 (11)
2010 (7)
2009 (6)
2008 (6)
2006 (2)
2007 (1)
2000 (1)

Lab affiliation

Department of Infection Biology Institute of Infection & Global Health University of Liverpool Liverpool Science Park IC2 146 Brownlow Hill Liverpool L3 5RF UK (1)
Head of The Steen-Laboratory, Director of Proteomics, Boston Children's Hospital, Harvard Medical School (1)
Institue of Bioinformatics Discoverer Building, 7th Floor International Tech Park Whitefield, Bangalore - 560 066 Karnataka, India. (1)

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D-allulose ameliorates adiposity through the AMPK-SIRT1-PGC-1α pathway in HFD-induced SD rats.

Not available

S-EPMC8829832 | biostudies-literature

Stromal factors SDF1alpha, sFRP1 and VEGFD induce dopaminergic neuron differentiation of human pluripotent stem cells

The identified stromal factors SDF1alpha, sFRP1 and VEGFD induce dopaminergic neuron differentiation of human pluripotent stem cells. Human embryonic stem cell (hESC)-derived dopaminergic (DA) neurons are potentially useful for treating Parkinson’s disease (PD) through cell replacement therapy. Gen...

ORGANISM(S): Mus musculus

2012-06-24 | E-GEOD-20503 | biostudies-arrayexpress

Vitamin D supplementation and vitamin D status in children of immigrant background in Norway.

Not available

S-EPMC10261310 | biostudies-literature

Historical changes in plant water use and need in the continental United States.

Not available

S-EPMC8412362 | biostudies-literature

Real-time quantitative PCR analysis of mRNA from lungs of WT and Pglyrp1-/- mice sensitized with HDM

Wild type (WT) and Pglyrp1-/- mice were treated with PBS or sensitized 5 days/week for 3 or 5 weeks with 10 M-BM-5l per application of 2.5 mg/ml of purified house dust mite allergen. 3 days after the last sensitization the lungs were removed and homogenized, and RNA was isolated from the right lobes...

ORGANISM(S): Mus musculus

2012-12-25 | E-GEOD-43137 | biostudies-arrayexpress

Differentially expressed genes between WT and AtC3H17-overexpressing transgenic plants

We characterized the biological and molecular functions of AtC3H17, a unique Arabidopsis gene encoding a non-tandem CCCH zinc finger protein, in plant development. To investigate the downstream regulatory mechanisms of AtC3H17, whole genome microarray expression profiling was carried out. The experi...

ORGANISM(S): Arabidopsis thaliana

2015-12-05 | E-GEOD-75702 | biostudies-arrayexpress

Pregnancy vitamin D supplementation and offspring bone mineral density in childhood follow-up of a randomized controlled trial.

Not available

S-EPMC11600048 | biostudies-literature

Demographic, lifestyle, and genetic determinants of circulating concentrations of 25-hydroxyvitamin D and vitamin D-binding protein in African American and European American women.

Not available

S-EPMC5445669 | biostudies-literature

Serum 25-Hydroxyvitamin D Levels and Dry Eye Syndrome: Differential Effects of Vitamin D on Ocular Diseases.

Not available

S-EPMC4760949 | biostudies-literature

Identifying important conservation areas for the clouded leopard Neofelis nebulosa in a mountainous landscape: Inference from spatial modeling techniques.