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Unknown
(5120)
Proteomics
(102)
Transcriptomics
(92)
Genomics
(34)
Metabolomics
(18)
Organisms
Homo sapiens
(133)
Mus musculus
(44)
Arabidopsis thaliana
(9)
Drosophila melanogaster
(8)
Rattus norvegicus
(5)
Escherichia coli
(3)
Chlamydomonas sp. HS-5
(3)
Gallus gallus
(2)
Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130
(2)
Severe acute respiratory syndrome coronavirus 2
(2)
Sorghum bicolor
(1)
Oryza sativa Japonica Group
(1)
Caenorhabditis elegans
(1)
Plasmodium falciparum
(1)
Escherichia coli str. K-12 substr. MG1655
(1)
Sus scrofa
(1)
Danio rerio
(1)
Acinetobacter baumannii
(1)
Bos taurus
(1)
Ceratopteris
(1)
Ciona intestinalis
(1)
Cytomegalovirus
(1)
Drosophila willistoni
(1)
Hemicentrotus pulcherrimus
(1)
Leishmania amazonensis
(1)
Leishmania infantum
(1)
Leishmania mexicana
(1)
Magallana gigas x Magallana angulata
(1)
Oncorhynchus mykiss
(1)
Oryctolagus cuniculus
(1)
Organisms
Stenotrophomonas sp. BSUC-16
(1)
Escherichia coli str. K-12 substr. MG1655
(1)
Mus musculus
(1)
Repository
biostudies-arrayexpress
(102)
pride
(96)
MetaboLights
(18)
EGA
(16)
ENA
(9)
MassIVE
(4)
jPOST
(1)
Tissue
Cell culture
(16)
Epithelial cell
(9)
Blood plasma
(5)
Oral epithelium
(5)
Blood
(3)
Blood cell
(3)
Ciliary body
(3)
Fibroblast
(3)
Blood serum
(2)
Brain
(2)
Cell line cell
(2)
Feces
(2)
Heart
(2)
Keratinocyte
(2)
Leukocyte
(2)
Lung
(2)
Myocardium
(2)
Ovary
(2)
Permanent cell line cell
(2)
Accessory sex gland
(1)
Adrenal medulla
(1)
Bone marrow
(1)
Breast
(1)
Bronchoalveolar lavage
(1)
Carotid artery segment
(1)
Carotid atherosclerotic plaque
(1)
Early embryonic cell
(1)
Embryo
(1)
Embryonic stem cell
(1)
Epithelial cell of prostate
(1)
Disease
Acute leukemia
(3)
Breast cancer
(2)
COVID-19
(2)
Disease free
(2)
Malignant neoplasm of ovary
(2)
Normal
(1)
Abnormal breast morphology
(1)
Atherosclerosis
(1)
Cell type cancer
(1)
Chronic myeloid leukemia
(1)
Colon cancer
(1)
Degenerative disc disease
(1)
Developmental and epileptic encephalopathy 9
(1)
Ehlers-Danlos syndrome
(1)
Hypertrophic cardiomyopathy
(1)
Irritable bowel syndrome
(1)
Kidney disease
(1)
Leishmaniasis
(1)
Lung cancer
(1)
Obsessive-compulsive disorder
(1)
Oral cavity cancer
(1)
Paraganglioma
(1)
Parkinson's disease
(1)
Prostate carcinoma
(1)
Pulmonary fibrosis
(1)
Sarcoidosis
(1)
Type 2 diabetes mellitus
(1)
Technology Type
Mass Spectrometry
(96)
Shotgun proteomics
(47)
Bottom-up proteomics
(27)
Mass spectrometry
(14)
Data-dependent acquisition
(13)
Affinity purification coupled with mass spectrometry proteomics
(8)
Data-independent acquisition
(8)
Mass spectrometry assay
(4)
Chemical cross-linking coupled with mass spectrometry proteomics
(4)
Gel-based experiment
(4)
SWATH MS
(4)
Top-down proteomics
(2)
Illumina HiSeq 2000
(1)
Illumina HiSeq 2500, ILLUMINA
(1)
Illumina HiSeq 4000, ILLUMINA
(1)
Illumina MiSeq, Illumina Genome Analyzer IIx
(1)
NMR spectroscopy
(1)
NMR spectroscopy assay
(1)
All-ion fragmentation
(1)
HDMSE
(1)
SRM/MRM
(1)
Instrument Platform
NextSeq 500
(7)
Liquid Chromatography MS - negative - reverse phase
(7)
Illumina NovaSeq 6000
(6)
Liquid Chromatography MS - positive - reverse phase
(6)
Liquid Chromatography MS - positive - hilic
(5)
Q Exactive
(4)
Conviron controlled environment chamber
(2)
Illumina HiSeq 4000
(2)
Orbitrap Fusion
(2)
Liquid Chromatography MS - Negative (LC-MS (Negative))
(2)
Liquid Chromatography MS - Positive (LC-MS (Positive))
(2)
Liquid Chromatography MS - negative - hilic
(2)
Liquid Chromatography MS - positive
(2)
Liquid Chromatography Tandem MS (LC-MS/MS)
(2)
Nuclear Magnetic Resonance (NMR) -
(2)
BD FACSARIA III
(1)
Fluidigm C1
(1)
Illumina HiScanSQ
(1)
MinION
(1)
HiSeq X Ten
(1)
Illumina HiSeq 2500
(1)
Gas Chromatography MS -
(1)
Gas Chromatography MS - positive
(1)
Liquid Chromatography MS - Alternating (LC-MS (Alternating))
(1)
Liquid Chromatography MS - alternating - reverse phase
(1)
Liquid Chromatography MS - alternating - reverse-phase
(1)
Liquid Chromatography MS - negative
(1)
MS Imaging -
(1)
Applied biosystems / mds sciex 4700 proteomics analyzer
(1)
Applied biosystems / mds sciex q trap
(1)
Publication Date
2025
(22)
2014
(19)
2021
(18)
2024
(17)
2026
(16)
2022
(13)
2016
(13)
2010
(13)
2019
(12)
2013
(11)
2023
(11)
2020
(10)
2011
(10)
2015
(8)
2012
(8)
2018
(7)
2008
(4)
2017
(4)
2007
(3)
2009
(1)
2005
(1)
CHEBI ID
CHEBI:16704
(7)
CHEBI:17368
(7)
CHEBI:25017
(7)
CHEBI:27897
(7)
CHEBI:15354
(6)
CHEBI:15741
(6)
CHEBI:15891
(6)
CHEBI:15971
(6)
CHEBI:16015
(6)
CHEBI:16359
(6)
CHEBI:16467
(6)
CHEBI:16643
(6)
CHEBI:17191
(6)
CHEBI:17295
(6)
CHEBI:17895
(6)
CHEBI:15428
(5)
CHEBI:15760
(5)
CHEBI:16325
(5)
CHEBI:16335
(5)
CHEBI:16414
(5)
CHEBI:16566
(5)
CHEBI:16755
(5)
CHEBI:16811
(5)
CHEBI:16856
(5)
CHEBI:16865
(5)
CHEBI:16919
(5)
CHEBI:17053
(5)
CHEBI:17115
(5)
CHEBI:17203
(5)
CHEBI:17750
(5)
Metabolite Name
Choline
(5)
Adenine
(3)
Adenosine
(3)
Betaine
(3)
Cytosine
(3)
Guanine
(3)
L-Arginine
(3)
L-Homoserine
(3)
Methionine
(3)
Tryptophan
(3)
Uridine
(3)
(3R)-beta-Leucine
(2)
1,4-Lactone
(2)
1-Linoleoylglycerophosphocholine
(2)
1-Pyrroline-4-hydroxy-2-carboxylate
(2)
10-Oxodecanoate
(2)
2'-O-Methylodoratol
(2)
3-Hydroxypropenoate
(2)
4-Hydroxybenzaldehyde
(2)
4-Oxoproline
(2)
7-Methylguanine
(2)
8(S)-HETrE
(2)
Acetylcarnitine
(2)
Aflatoxin B1
(2)
Allantoin
(2)
Anandamide (22:6, n-3)
(2)
Atropine
(2)
Azelaic acid
(2)
Bis(2-ethylhexyl) phthalate
(2)
Bisphenol A
(2)
First Public Date
2024
(2)
2016
(2)
2026
(1)
2021
(1)
2020
(1)
2019
(1)
2014
(1)
Classification
bacteria
(1)
Modification
N6
(1)
N6-dimethyl-L-lysine
(1)
Not available
(1)
Study type
Transcription profiling by array
(52)
RNA-seq of coding RNA
(14)
Unknown experiment type
(6)
ChIP-seq
(6)
RNA-seq of non coding RNA
(4)
Genotyping by high throughput sequencing
(3)
RNA-seq of coding RNA from single cells
(3)
Comparative genomic hybridization by array
(2)
Methylation profiling by array
(2)
Methylation profiling by high throughput sequencing
(2)
Baseline
(1)
Plant - High-throughput sequencing
(1)
Transcription profiling by RT-PCR
(1)
Spatial transcriptomics by high-throughput sequencing
(1)
Single nucleus RNA sequencing
(1)
DNA-seq
(1)
Proteomic profiling by array
(1)
RNA-seq of total RNA
(1)
Release Date
2022
(672)
2023
(630)
2025
(587)
2021
(583)
2024
(578)
2020
(377)
2019
(298)
2018
(276)
2017
(203)
2015
(187)
2016
(174)
2014
(138)
2013
(104)
2011
(87)
2026
(81)
2012
(81)
2010
(61)
2009
(41)
2008
(30)
2007
(15)
2005
(7)
2006
(4)
2004
(3)
2003
(2)
2001
(1)
1999
(1)
1997
(1)
Lab affiliation
Institute of Bioinformatics , International Technology Park, Bangalore, India
(4)
Proteomics & Metabolomics Facility, Center for Open Research Resources & Equipment University of Connecticut Storrs, CT 06269
(4)
College of Life Sciences, University of Dundee
(2)
Department of Pharmaceutical Sciences, Leslie Dan Faculty of Pharmacy, University of Toronto
(2)
Division of Cell Matrix Biology and Regenerative Medicine, School of Biological Sciences, Faculty of Biology, Medicine and Health, University of Manchester, Manchester, United Kingdom, M13 9PT
(2)
MRC Toxicology Unit, University of Cambridge
(2)
Mayo Clinic
(2)
School of Life and Environmental Sciences, University of Sydney, NSW 2006 Australia
(2)
The University of Melbourne
(2)
1BHF Centre of Research Excellence, Division of Cardiovascular Medicine, Radcliffe Department of Medicine, John Radcliffe Hospital, University of Oxford, UK
(1)
Academia Sinica Institute of Biological Chemistry(IBC), Dr. Shih-Hsiung Wu's lab, Taipei, Taiwan (R.O.C.)
(1)
BIOCEV, First Faculty of Medicine, Charles University, Czech Republic
(1)
Baylor College of Medicine Radiation Oncology
(1)
Bioanalytics, Institute of Biotechnology, Technische Universität Berlin, 13355 Berlin, Germany Wellcome Centre for Cell Biology, School of Biological Sciences, University of Edinburgh, Edinburgh EH9 3BF, Scotland, United Kingdom
(1)
Bristol Renal University of Bristol UK
(1)
CRUK - Beatson Institute for Cancer Research - Switchback Rd, Bearsden, Glasgow G61 1BD - United Kingdom
(1)
Cambridge Institute for Medical Research, University of Cambridge
(1)
Cancer Institute, University College London
(1)
Cardiovascular Center of Excellence, Louisiana State University Health Sciences Center, New Orleans, Louisiana, 70112, USA
(1)
Center for Cancer Research, Massachusetts General Hospital, Boston MA, USA;Department of Chemistry and Chemical Biology, Harvard University, Cambridge MA, USA.
(1)
Centre for Genomics and Computational Biology Barts Cancer Institute Queen Mary, University of London John Vane Science Centre, Charterhouse Square, London EC1M 6BQ Tel: +44 (0)20 7882 8266
(1)
Centre for Microbiome Research, School of Biomedical Sciences, Queensland University of Technology (QUT), Translational Research Institute, Woolloongabba, QLD, Australia
(1)
Children's Hospital of Philadelphia 416B Abramson Pediatric Research Center Philadelphia, PA 19104 Office: 215-590-5320 Lab: 215-590-5319
(1)
Clinical Neuroproteomics Lab Navarrabiomed Proteored Pamplona, Spain
(1)
Department of Biochemistry and Molecular Biology, University of Calgary, Alberta, Canada; Department of Physiology and Pharmacology, University of Calgary, Alberta, Canada; The Hotchkiss Brain Institute, University of Calgary, Alberta, Canada; McCaig Institute for Bone and Joint Health, University of Calgary, Alberta, Canada.
(1)
Department of Cellular and Molecular Pharmacology University of California San Francisco (UCSF)
(1)
Department of Chemistry, University of Michigan, Ann Arbor, MI 48109 Department of Biological Chemistry, University of Michigan, Ann Arbor, MI 48109
(1)
Department of Molecular Medicine, The Scripps Research Institute, Jupiter, FL 33458, USA.
(1)
Department of Pathology and Cell Biology Morsani College of Medicine University of South Florida
(1)
Department of Physiology and Pharmacology, Cumming School of Medicine, University of Calgary, Calgary, AB, Canada
(1)
Tags
xref:ArrayExpress:E-MTAB-4967
(1)
xref:ArrayExpress:E-MTAB-4657
(1)
xref:PubMed:38690566
(1)
xref:PubMed:19767843
(1)
pathogen
(1)
pathogen:bacterium
(1)
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Accelerated biodecolorization and detoxification of synthetic textile dye Acid Maroon V by bacterial consortium under redox mediator system.
Not available
S-EPMC9845506
|
biostudies-literature
Cite
Effect of Ca(v)beta subunits on structural organization of Ca(v)1.2 calcium channels.
Not available
S-EPMC2688388
|
biostudies-literature
Cite
Nutrient improvement for simultaneous production of exopolysaccharide and mycelial biomass by submerged cultivation of Schizophyllum commune AGMJ-1 using statistical optimization.
Not available
S-EPMC3723862
|
biostudies-literature
Cite
COX-2/PGE2: molecular ambassadors of Kaposi's sarcoma-associated herpes virus oncoprotein-v-FLIP.
Not available
S-EPMC3412643
|
biostudies-literature
Cite
Biodegradation of kerosene: Study of growth optimization and metabolic fate of P. janthinellum SDX7.
Not available
S-EPMC4507531
|
biostudies-literature
Cite
Differential recognition of CD1d-alpha-galactosyl ceramide by the V beta 8.2 and V beta 7 semi-invariant NKT T cell receptors.
Not available
S-EPMC2765864
|
biostudies-literature
Cite
Three-year data from the XIENCE V INDIA study: safety and efficacy of XIENCE V in 1000 real world Indian patients.
Not available
S-EPMC4121758
|
biostudies-literature
Cite
CTCF-binding elements mediate control of V(D)J recombination.
Not available
S-EPMC3342812
|
biostudies-literature
Cite
Nerve injury increases native Ca V 2.2 trafficking in dorsal root ganglion mechanoreceptors.
Not available
S-EPMC10184561
|
biostudies-literature
Cite
Regulation of Mutagenic DNA Polymerase V Activation in Space and Time.
Not available
S-EPMC4552617
|
biostudies-literature
Cite
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