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TranscriptomicsGENCODE PCR-Seq Batch XVII
As part of the ENCODE consortium, the GENCODE project is producing a reference gene set through manual and automated gene prediction. Selected transcript models are verified experimentally by RT-PCR amplification of at least one of their unique splice junctions, followed by high-throughput sequencin...
ORGANISM(S): Homo sapiens 
2017-03-31 | E-MTAB-5527 | biostudies-arrayexpress
GenomicsApplication of Microdroplet PCR for Large-Scale Targeted Bisulfite Sequencing
Cytosine methylation of DNA CpG dinucleotides in gene promoters is an epigenetic modification that regulates gene transcription. While many methods exist to interrogate methylation states, no current methods offer large-scale, targeted, single CpG resolution. We report an approach combining bisulf...
ORGANISM(S): Homo sapiens 
2011-06-25 | E-GEOD-30179 | biostudies-arrayexpress
TranscriptomicsRapid Identification of Bacterial Pathogens using a PCR- and Microarray-Based Assay
A method based on a modified broad-range PCR and an oligonucleotide microarray for the simultaneous detection and identification of 12 bacterial pathogens at the species level. The feasibility of this assay in routine diagnostic testing was evaluated using 146 blood culture positive and 40 blood cul...
ORGANISM(S): Homo sapiens 
2010-06-24 | E-GEOD-17221 | biostudies-arrayexpress
TranscriptomicsGENCODE PCR-Seq Batch M1
As part of the ENCODE consortium the GENCODE project is producing a reference gene set through manual and automated gene prediction. Selected transcript models are verified experimentally by RT-PCR amplification of at least one of their unique splice junctions followed by high-throughput sequencing....
ORGANISM(S): Mus musculus 
2015-01-22 | E-MTAB-3261 | biostudies-arrayexpress
TranscriptomicsGENCODE PCR-Seq Batch XII
As part of the ENCODE consortium the GENCODE project is producing a reference gene set through manual and automated gene prediction. Selected transcript models are verified experimentally by RT-PCR amplification of at least one of their unique splice junctions followed by sequencing. The experiment ...
ORGANISM(S): Homo sapiens 
2014-11-26 | E-MTAB-3122 | biostudies-arrayexpress
TranscriptomicsGENCODE PCR-Seq Batch XIV
As part of the ENCODE consortium the GENCODE project is producing a reference gene set through manual and automated gene prediction. Selected transcript models are verified experimentally by RT-PCR amplification of at least one of their unique splice junctions followed by sequencing. The experiment ...
ORGANISM(S): Homo sapiens 
2014-12-16 | E-MTAB-3168 | biostudies-arrayexpress
TranscriptomicsGENCODE PCR-Seq Batch XV
As part of the ENCODE consortium the GENCODE project is producing a reference gene set through manual and automated gene prediction. Selected transcript models are verified experimentally by RT-PCR amplification of at least one of their unique splice junctions followed by high-throughput sequencing....
ORGANISM(S): Homo sapiens 
2014-12-16 | E-MTAB-3169 | biostudies-arrayexpress
GenomicsBurkholderia contaminans strain:PCR-C_Y9
Burkholderia contaminans strain:PCR-C_Y9 Genome sequencing
PRJNA1175622 | ENA
GenomicsBacillus tropicus strain:PCr-6
Bacillus tropicus strain:PCr-6 Genome sequencing and assembly
PRJNA1273302 | ENA
ProteomicsComparison of LC-MS/MS and real-time PCR assays for the efficient detection of potentially allergenic silkworm
The silkworm (Bombyx mori) has long been considered a source of food and medicine due to its high nutritional, medicinal, and economic value in East Asia. However, in some sensitive individuals, silkworm consumption can cause allergenic reactions such as vomiting, asthma, and anaphylaxis. Therefore,...
ORGANISM(S): Bombyx mori (Silk moth) 
2024-05-24 | PXD042494 | Pride
Real-time pcr Model cookies Alpha-amlyase Lipoprotein Bombyx mori Silkworm Lc-ms/ms 
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