Peng Yuan Y - OmicsDI

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Unknown (1247)
Proteomics (61)
Transcriptomics (7)
Genomics (5)
Metabolomics (5)

Organisms

Homo sapiens (29)
Aerococcus urinae NBRC 15544 = CCUG 36881 (25)
Andropogon gerardi (25)
Bacteria (25)
Canis lupus familiaris (25)
Cnidaria (25)
Ectopseudomonas oleovorans CECT 5344 (25)
Ensifer adhaerens (25)
Enterococcus faecalis (25)
Globicatella sanguinis (25)
Halictus scabiosae (25)
Human immunodeficiency virus 1 (25)
Mesocricetus auratus (25)
Methylohalobius crimeensis 10Ki (25)
Miscanthus x giganteus (25)
Mus musculus (4)
Oryza sativa (2)
Drosophila melanogaster (2)
Acromyrmex echinatior (1)
Lilium longiflorum (1)
502593 (1)
Arabidopsis thaliana (1)
Bos taurus (1)
Deinagkistrodon acutus (1)
Lamprigera yunnana (1)
Macaca fascicularis fascicularis (1)
Magnaporthe (1)
Pseudomonas aeruginosa PAO1 (1)
Pyricularia oryzae P131 (1)
Severe acute respiratory syndrome coronavirus 2 (1)

Repository

iProX (34)
pride (25)
biostudies-arrayexpress (7)
EGA (5)
MetaboLights (5)
MassIVE (2)

Tissue

Cell culture (4)
Epithelial cell (4)
Brain (3)
Fibroblast (2)
Kidney (2)
Skeletal muscle tissue (2)
Tibialis anterior (2)
Blood serum (1)
Bone marrow-derived macrophage (1)
Colon (1)
Heart (1)
Hepatocyte (1)
Serum (1)

Disease

Alzheimer's disease (2)
Cachexia (2)
Muscular atrophy (2)
Bone osteosarcoma (1)

Technology Type

Mass Spectrometry (25)
Shotgun proteomics (15)
Mass spectrometry (5)
Bottom-up proteomics (5)
Affinity proteomics (2)
Affinity purification coupled with mass spectrometry proteomics (2)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
Data-dependent acquisition (1)
Data-independent acquisition (1)
Gel-based experiment (1)
Proteogenomics (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (2)
Liquid Chromatography MS - positive - reverse phase (2)
Exactive Plus (1)
Q Exactive (1)
6530 Q-TOF LC/MS (Agilent) (1)
Xevo G2 QTOF (Waters) (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - positive (1)

Publication Date

2022 (13)
2023 (10)
2025 (9)
2024 (9)
2021 (9)
2026 (5)
2020 (4)
2019 (4)
2014 (3)
2017 (2)
2015 (1)
2010 (1)
2009 (1)
2008 (1)
2018 (1)

CHEBI ID

CHEBI:16927 (3)
CHEBI:17786 (3)
CHEBI:16031 (3)
CHEBI:17620 (3)
CHEBI:55328 (3)
CHEBI:15999 (3)
CHEBI:17311 (3)
CHEBI:28661 (3)
CHEBI:16040 (3)
CHEBI:7916 (3)
CHEBI:16543 (3)
CHEBI:16235 (3)
CHEBI:17895 (3)
CHEBI:16914 (3)
CHEBI:138861 (2)
CHEBI:9698 (2)
CHEBI:18128 (2)
CHEBI:50540 (2)
CHEBI:2880 (2)
CHEBI:38626 (2)
CHEBI:38178 (2)
CHEBI:3613 (2)
CHEBI:17209 (2)
CHEBI:133908 (2)
CHEBI:17257 (2)
CHEBI:73237 (2)
CHEBI:81314 (2)
CHEBI:26907 (2)
CHEBI:3293 (2)
CHEBI:27472 (2)

Metabolite Name

Genistein 4'-O-glucuronide (2)
2-Methoxyestradiol-17beta 3-sulfate (2)
Salicylate (2)
Caffeic acid 3-glucoside (2)
Oleandolide (2)
Procyanidin B2 (2)
Beta-Zearalenol (2)
Lamioside (2)
Tuberonic acid glucoside (2)
3'-CMP (2)
Cucurbitacin S (2)
Indole-3-ethanol (2)
Zizybeoside I (2)
Noradrenaline (2)
Cinobufotalin (2)
Piperonyl sulfoxide (2)
4-Heptyloxyphenol (2)
Piceatannol (2)
Wogonin (2)
Amastatin (2)
Zierin (2)
Lusitanicoside (2)
Rishitin (2)
Cafestol (2)
Ferulate (2)
Cantharidin (2)
Indole-3-acetaldehyde (2)
Valine (2)
L-tyrosine (2)
Mitoxantrone (2)

Study type

Transcription profiling by array (3)
RNA-seq of non coding RNA (2)
Unknown experiment type (1)
RNA-seq of coding RNA (1)

Release Date

2025 (189)
2024 (181)
2022 (180)
2023 (175)
2021 (140)
2020 (106)
2019 (60)
2018 (47)
2017 (40)
2016 (32)
2026 (27)
2014 (21)
2015 (18)
2013 (9)
2012 (8)
2011 (6)
2010 (5)
2009 (4)
2008 (3)
2005 (2)
2007 (1)

Lab affiliation

BGI Research (3)
Department of Developmental Neurobiology St. Jude Children's Research Hospital (2)
St Jude Children's Research Hospital (2)
Wuhan University School of Basic Medical Sciences (2)
CAS Key Laboratory for Quantitative Engineering Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences (1)
Center for Proteomics & Metabolomics, St. Jude Children's Research Hospital, Memphis, TN 38105, USA (1)
Department of Chemical Biology College of Chemistry and Molecular Engineering Peking University (1)
Department of Neurology, UCLA (1)
Department of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, TN 38105, USA (1)
Departments of Critical Care Medicine, the First Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang, 150001, China. (1)
HHubei Academy of Agricultural Sciences, Wuhan, China ubei Academy of Agricultural Sciences, Wuhan, China (1)
Harvard Medical School (1)
Laboratory of Integrative Biology, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences; Guangzhou, 510530, China. (1)
Lineberger Comprehensive Cancer Center, Department of Microbiology and Immunology, The University of North Carolina at Chapel Hill, Chapel Hill, NC, United States of America.  (1)
Member, Pharmacy $ Pharmaceutical Sciences, St Jude Children's Research Hospital (1)
Nanchang University (1)
Professor Department of Structural Biology Department of Developmental Neurobiology MS 311, D1034C (office) & D1039, D1046 (lab) St. Jude Children's Research Hospital 262 Danny Thomas Place Memphis, TN 38105-3678 (1)
Soochow University (1)
St. Jude Children's Research Hospital (1)
The Affiliated Hospital of Guizhou Medical University (1)

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Lack of serum- and glucocorticoid-inducible kinase 3 leads to podocyte dysfunction.

Not available

S-EPMC8793723 | biostudies-literature

TIMELESS promotes reprogramming of glucose metabolism in oral squamous cell carcinoma.

Not available

S-EPMC10768318 | biostudies-literature

Gene repression via multiplex gRNA strategy in Y. lipolytica.

Not available

S-EPMC5910576 | biostudies-literature

Colitis-associated carcinogenesis: crosstalk between tumors, immune cells and gut microbiota.

Not available

S-EPMC10594787 | biostudies-literature

Transcription profiling of human stage non-small cell lung cancer samples, metaanalysis for a predictive signature

We applied a meta-analysis of datasets from seven different microarray studies on lung cancer for differentially expressed genes related to survival time (under 2 y and over 5 y). Systematic bias adjustment in the datasets was performed by distance-weighted discrimination (DWD). We identified a gene...

ORGANISM(S): Homo sapiens

2008-06-14 | E-GEOD-6253 | biostudies-arrayexpress

Targeting CSPG4 enhances the anti-tumor activity of CAR-NK cells for glioblastoma.

Not available

S-EPMC12528275 | biostudies-literature

Therapeutic efficacy of human adipose mesenchymal stem cells in Crohn's colon fibrosis is improved by IFN-γ and kynurenic acid priming through indoleamine 2,3-dioxygenase-1 signaling.

Not available

S-EPMC9461110 | biostudies-literature

Smooth Muscle Differentiation of Penile Stem/Progenitor Cells Induced by Microenergy Acoustic Pulses In Vitro.

Not available

S-EPMC6885549 | biostudies-literature

In vivo adenine base editing corrects newborn murine model of Hurler syndrome.