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MetabolomicsUntargeted plasma metabolome identifies biomarkers in patients with extracranial arteriovenous malformations

OBJECTIVE: This study aimed to investigate the plasma metabolic profile of patients with extracranial arteriovenous malformations (AVM).

METHOD: Plasma samples were collected from 32 AVM patients and 30 healthy controls (HC). Ultra-high performance liquid c...

2023-10-30 | MTBLS7753 | MetaboLights
GenomicsGenome-wide maps of chromatin state in rice endosperm
We report the application of single-molecule-based sequencing technology for high-throughput profiling of histone H3 trimethylation in rice endosperm. By obtaining about four hundred million bases of sequence from rice chromatin immunoprecipitated DNA, we generated genome-wide chromatin-state maps o...
ORGANISM(S): Oryza sativa 
2011-12-06 | E-GEOD-27048 | biostudies-arrayexpress
ProteomicsProteome-wide lysine succinylome profiling and comprehensive analysis of protein lysine co-modification in developing rice seeds
Lysine succinylation has been recognized as a post-translational modification (PTM) in recent years. It is plausible that succinylation may have a vaster functional impact than acetylation due to bulkier structural changes and greater charge differences on the modified lysine residue. Currently, how...
ORGANISM(S): Oryza sativa (Rice) 
2019-09-09 | PXD013664 | Pride
Post-translational modification  lysine succinylation  succinylome  rice  storage nutrient  seeds 
ProteomicsOryza sativa Lysine Acetylation LC-MS/MS
By the combination of affinity enrichment and high-resolution LC-MS/MS analysis, large-scale lysine acetylome analysis was performed in oryza sativa. Altogether, 1,003 lysine acetylation sites in 692 proteins were identified.
ORGANISM(S): Oryza sativa (Rice) 
2018-10-24 | PXD002773 | Pride
Oryza sativa Lysine acetylation Lc-ms/ms 
TranscriptomicsExpress data from rice endosperm
Immatured rice seeds 7-8 days after pollination were used for expression analysis and matured rice leaf was used as control. Targets from biological replicates of both were generated and the expression were determined using Affymetrix Rice Genome arrays. Rice immatured seed after 7-8 days pollinatio...
ORGANISM(S): Oryza sativa 
2011-12-06 | E-GEOD-26840 | biostudies-arrayexpress
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