Peptide cyclization

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Unknown (419)
Proteomics (64)
Metabolomics (4)
Other (3)
Genomics (3)

Organisms

Aerococcus urinae NBRC 15544 = CCUG 36881 (58)
Alteromonadales (58)
Bacteria (58)
Canis lupus familiaris (58)
Carya cathayensis (58)
Ectopseudomonas oleovorans CECT 5344 (58)
Ensifer adhaerens (58)
Enterococcus faecalis (58)
Globicatella sanguinis (58)
Halictus scabiosae (58)
Histomonas meleagridis (58)
Human immunodeficiency virus 1 (58)
Mesocricetus auratus (58)
Methylohalobius crimeensis 10Ki (58)
Mus musculus (58)
Olavius algarvensis sulfate-reducing endosymbiont (58)
Ophrys garganica (58)
Ophrys sphegodes (58)
Pseudomonas aeruginosa SJTD-1 (58)
Pseudomonas putida KT2440 (58)
Rabies virus Nishigahara RCEH (58)
Rattus norvegicus (58)
Rattus rattus (58)
Rhodococcus jostii RHA1 (58)
Rhodopseudomonas palustris (58)
Schizosaccharomyces pombe 927 (58)
Homo sapiens (2)
Achyranthes bidentata (1)
Celtis occidentalis (1)
Selaginella uncinata (1)

Organisms

Streptomyces albidoflavus (1)

Repository

pride (58)
MassIVE (7)
GNPS (3)
ENA (3)
iProX (1)
jPOST (1)
MetaboLights (1)

Tissue

Cell culture (15)
Brain (6)
Blood plasma (4)
Blood platelet (3)
Cell suspension culture (3)
Heart (3)
Liver (3)
Macrophage (3)
Early embryonic cell (2)
Kidney (2)
Leaf (2)
Lung (2)
Pancreas (2)
Plant cell (2)
Spleen (2)
Whole body (2)
Adipose tissue (1)
Adrenal gland (1)
Astrocyte (1)
B-lymphocyte (1)
Blood (1)
Blood cell (1)
Blood serum (1)
Cerebrospinal fluid (1)
Colon (1)
Colon epithelial cell (1)
Cytotoxic T-lymphocyte (1)
Dental pulp (1)
HeLa cell (1)
JURKAT cell (1)

Disease

Breast cancer (1)
Candidiasis (1)
Chronic myeloid leukemia (1)
Colon cancer (1)
Cystic fibrosis (1)
Disease free (1)
Immunoglobulin light chain amyloidosis (1)
Inflammation (1)
Intestinal schistosomiasis (1)
Lung adenocarcinoma (1)
Meningitis (1)
Mucopolysaccharidosis type IIIB (1)
Myopathy (1)
Pancreatic carcinoma (1)
Periodontitis (1)
Platelet storage pool deficiency (1)

Technology Type

Mass Spectrometry (58)
Shotgun proteomics (34)
Bottom-up proteomics (12)
Gel-based experiment (8)
Data-dependent acquisition (7)
Data-independent acquisition (5)
Affinity purification coupled with mass spectrometry proteomics (3)
Top-down proteomics (2)
Mass spectrometry (1)
All-ion fragmentation (1)
SRM/MRM (1)
SWATH MS (1)

Instrument Platform

Orbitrap Fusion (6)
Q Exactive Plus (2)
LTQ Orbitrap Velos (1)
Q Exactive (1)
TimsTOF Pro (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - alternating - reverse phase (1)

Publication Date

2025 (13)
2021 (9)
2018 (8)
2026 (7)
2019 (6)
2024 (5)
2016 (5)
2022 (4)
2017 (4)
2020 (3)
2023 (2)
2015 (2)
2014 (2)
2013 (1)

CHEBI ID

CHEBI:53753 (1)
CHEBI:176778 (1)
CHEBI:176777 (1)
CHEBI:141283 (1)
CHEBI:140929 (1)
CHEBI:16011 (1)
CHEBI:50464 (1)
CHEBI:176780 (1)
CHEBI:176779 (1)
CHEBI:176781 (1)
CHEBI:71225 (1)
CHEBI:6053 (1)
CHEBI:76173 (1)
CHEBI:2899 (1)
CHEBI:76155 (1)
CHEBI:8198 (1)
CHEBI:61724 (1)
CHEBI:39932 (1)
CHEBI:141205 (1)
CHEBI:75841 (1)
CHEBI:10556 (1)
CHEBI:29020 (1)
CHEBI:28866 (1)
CHEBI:89945 (1)
CHEBI:23292 (1)
CHEBI:20030 (1)
CHEBI:87393 (1)
CHEBI:25097 (1)
CHEBI:156235 (1)
CHEBI:67206 (1)

Metabolite Name

2(5H)-Furanone,5-ethyl (1)
Neral (1)
Glyceryl trioleate (1)
Geranylacetone (1)
E-nerolidol (1)
Dihydroactinidiolide (1)
Cis-3-hexenyl butyrate (1)
(E)-2-Hexenol (1)
Cis-3-hexenyl benzoate (1)
Trans-3-hexenal (1)
Penten-3-one (1)
Glyceryl tripalmitoleate (1)
3-methyl-3-heptanol (1)
1-hexanol-2-ethyl (1)
2-(5h)-furanone-5-ethyl (1)
1,2,3-tripentadecanoylglycerol (1)
Trans-epsilon-viniferin (1)
Trans-2-octenal (1)
Methyl-salicylate (1)
Cis-3-hexenylacetate (1)
Ceramide (1)
2-heptenal (1)
Isorhapontin (1)
Farnesene (1)
Astringin (1)
6-methyl-5-hepten-2-one (1)
1-hexanol (1)
Cis-3-hexenal (1)
Taxifolin (1)
Benzaldehyde (1)

First Public Date

2025 (1)
2024 (1)
2019 (1)

Modification

4-tetrahydrothiazine-3-carboxylic acid (2)
N6-dimethyl-L-lysine (2)
4x(2)H labeled dimethylated L-lysine (1)

Release Date

2025 (44)
2023 (39)
2022 (39)
2024 (34)
2021 (33)
2020 (29)
2016 (28)
2019 (24)
2018 (23)
2015 (20)
2017 (17)
2013 (13)
2008 (12)
2014 (11)
2011 (11)
2012 (10)
2007 (7)
2026 (6)
2009 (6)
2010 (5)
2006 (2)
2005 (2)
2000 (2)
2003 (1)
2002 (1)

Lab affiliation

MICALIS Institute Université Paris Saclay, INRAE, AgroParisTech 78350 Jouy-en-Josas France (3)
Charles University, Faculty of Pharmacy in Hradec Králové Department of Analytical Chemistry Akademika Heyrovského 1203/8 500 05 Hradec Králové, Czech Republic (2)
Department of Neuroscience, University of Florida (2)
Imperial College London (2)
Professor and Tier 1 Canada Research Chair in Proteinase Proteomics and Systems Biology at the University of British Columbia, Centre for Blood Research (2)
1VIB Center for Medical Biotechnology, VIB, Ghent, 9052, Belgium 2Department of Biomolecular Medicine, Ghent University, Ghent, 9052, Belgium (1)
Associate Professor, University of Washington (1)
Broad Institute (1)
CeMM - Research Center for Molecular Medicine of the Austrian Academy of Sciences (1)
Cell Cycle and Genome Stability Group. Institute of Functional Biology and Genomics (IBFG). Spanish National Research Council (CSIC). University of Salamanca (USAL). C/ Zacarías González 2. Salamanca 37007. SPAIN (1)
Centre for Blood Research, Department of Oral Biological and Medical Sciences, University of British Columbia, Vancouver, BC, Canada (1)
Centre for Blood Research, Department of Oral Biological and Medical Sciences, University of British Columbia, Vancouver, BC, Canada. (1)
Departamento de Microbiología y Parasitología, Facultad de Farmacia, Universidad Complutense de Madrid, Madrid, Spain (1)
Department of Molecular Medicine and Medical Biotechnology - University of Naples "Federico II" (1)
Department of Biochemistry and Molecular Biology Oklahoma State University Stillwater, OK 74078 USA (1)
Department of Biochemistry and Molecular Biology, Oklahoma Center for Respiratory and Infectious Diseases, Oklahoma State University, Stillwater, Oklahoma, USA (1)
Department of Biochemistry and Molecular Biology, Oklahoma State Univerity, Stillwater, OK. (1)
Department of Biological Chemistry John Innes Centre Norwich Research Park Norwich NR4 7UH (1)
Department of Biological Sciences and the Center for Emerging, Zoonotic, and Arthropod-Borne Pathogens, Virginia Tech, Blacksburg, VA (1)
Department of Cell Biology, Microbiology, and Molecular Biology, University of South Florida, Tampa, Florida, USA (1)
Department of Chemistry and Chemical Biology, Harvard University (1)
Department of Entomology and Plant Pathology, 127 Noble Research Center, Oklahoma State University, Stillwater, Oklahoma, USA, 74078 (1)
Department of Medicine, University of Chicago (1)
Department of Microbiology and Microbial Engineering, School of Life Sciences, Fudan University, Shanghai 200433, China (1)
Department of Microbiology and Molecular Genetics, Oklahoma State University (1)
Department of Microbiology and Molecular Genetics, Oklahoma State University, Stillwater, Oklahoma, USA. (1)
Department of Molecular Biology, University of Bergen, N-5020 Bergen (1)
Department of Neurochemistry, NIMHANS, No. 2900, Hosur Road, Bangalore-560029, Karnataka, India (1)
Department of Pharmacology Director of Proteomics Mass Spectrometry Facility (1)
Discipline of Pathology, Charles Perkins Centre, University of Sydney, Australia (1)