Personalized medicine

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Unknown (23069)
Genomics (696)
Transcriptomics (260)
Proteomics (183)
Metabolomics (25)
Genomic (19)
Clinical (16)
Methylation profiling (14)
Multiomics (14)
Models (9)
Other (8)

Organisms

Homo sapiens (468)
Aerococcus urinae NBRC 15544 = CCUG 36881 (95)
Alteromonadales (95)
Mus musculus (63)
Bos taurus (17)
Dermestes lardarius (16)
Senegalia senegal (16)
Frangula alnus (16)
Rhodotorula (16)
Pandalus borealis (16)
Pachymenia carnosa (16)
Bothrops moojeni (16)
Quercus alba (16)
Megathura crenulata (16)
Gossypium hirsutum (16)
Gallus gallus (16)
Ovis aries (16)
Medicago sativa (10)
Drosophila melanogaster (3)
Saccharomyces cerevisiae (2)
Canis lupus familiaris (2)
Rattus norvegicus (2)
Canis lupus (1)
human gut metagenome (1)
Macaca fascicularis (1)
Macaca nemestrina (1)
Pan troglodytes (1)
Macaca mulatta (1)
Escherichia coli (1)
human metagenome (1)

Organisms

Homo sapiens (357)
Mus musculus (35)
Rattus norvegicus (18)
unidentified (7)
Arabidopsis thaliana (5)
human gut metagenome (3)
Mycolicibacterium setense (2)
Drosophila melanogaster (2)
Canis lupus familiaris (2)
human skin metagenome (1)
Macaca mulatta (1)
Solanum lycopersicum (1)
Sus scrofa (1)
Danio rerio (1)
Saccharomyces cerevisiae (1)

Repository

ENA (526)
geo (213)
biostudies-arrayexpress (152)
EGA (116)
pride (95)
MassIVE (27)
MetaboLights (23)
dbGaP (19)
PeptideAtlas (15)
BioModels (9)
jPOST (7)
iProX (5)
GNPS (2)
NODE (2)
PanoramaPublic (2)
EVA (1)

Tissue

Cell culture (17)
Others (12)
Blood plasma (8)
Brain (8)
Epithelial cell (7)
Liver (5)
Plasma Non-glyco (3)
Blood serum (3)
Colon (3)
Lung (3)
Permanent cell line cell (3)
Urine (3)
Heart (2)
Kidney (2)
Pancreas (2)
Skeletal muscle (2)
Skin (2)
Sweat (2)
Venom gland (2)
Artery (1)
Ascites (1)
Ascites tumor cell (1)
B cell (1)
Blood cell (1)
Blood platelet (1)
Cartilage (1)
Cerebellum (1)
Cerebrospinal fluid (1)
Corneal endothelial cell (1)
Early embryonic cell (1)

Disease

Colorectal Neoplasms (9)
Malignant neoplasm of ovary (4)
Breast cancer (3)
Colon cancer (3)
Disease free (3)
Cancer (2)
Combined hepatocellular cholangiocarcinoma (2)
Intrahepatic cholangiocarcinoma (2)
Cholangiocarcinoma (2)
Hepatocellular carcinoma (2)
Melanoma (2)
Primary sclerosing cholangitis (2)
Diabetes Mellitus, Type 2 (1)
Pathologically (histologically or cytologically) confirmed diagnosis of solid tumor (breast, lung, colorectal and head and neck) (1)
Colorectal cancer surgery (1)
Neoplasm Metastasis (1)
Carcinoma (1)
Colonic Neoplasms (1)
Colorectal cancer (1)
Combined hepatocellular carcinoma (1)
Acute myeloid leukemia (1)
Adenocarcinoma (1)
Alzheimer's disease (1)
Aortic valve stenosis (1)
Bacterial sepsis (1)
Brain cancer (1)
Brain glioblastoma multiforme (1)
COVID-19 (1)
Cataract (1)
Chronic lymphocytic leukemia (1)

Technology Type

Mass Spectrometry (95)
Shotgun proteomics (56)
Bottom-up proteomics (21)
Mass spectrometry (18)
Data-dependent acquisition (18)
Data-independent acquisition (13)
Illumina HiSeq 2000 (5)
Mass spectrometry assay (4)
Top-down proteomics (3)
NMR spectroscopy (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Metaproteomics (2)
SWATH MS (2)
ILLUMINA, NextSeq 500, HiSeq X Ten (1)
OXFORD_NANOPORE, MinION (1)
ABI_SOLID, Illumina HiSeq 2000, Illumina 450K, AB 5500xl Genetic Analyzer, AB 5500 Genetic Analyzer, ILLUMINA (1)
Illumina HiSeq 1500, Illumina HiSeq 2500, Illumina Genome Analyzer IIx, ILLUMINA (1)
Illumina MiSeq, ILLUMINA (1)
HiSeq X Ten, ILLUMINA, Illumina HiSeq 2500 (1)
Illumina HiSeq 2500, ILLUMINA (1)
Illumina_450K (1)
Illumina MiSeq, Illumina Genome Analyzer IIx (1)
ILLUMINA, Illumina HiSeq 2000 (1)
Illumina Genome Analyzer, Illumina HiSeq 2000, Illumina MiSeq, Affymetrix_U133plus2- (1)
Illumina HiSeq 2500 (1)
Affinity purification coupled with mass spectrometry proteomics (1)
DiaPASEF (1)
Glycoproteomics (1)
Immunopeptidomics (1)

Instrument Platform

Illumina NovaSeq 6000 (18)
LTQ Orbitrap Velos (15)
Liquid Chromatography MS - positive - reverse phase (10)
Liquid Chromatography MS - negative - reverse phase (9)
Q Exactive (8)
Illumina HiSeq 2500 (6)
NextSeq 500 (4)
Q Exactive Plus (3)
LTQ Orbitrap Elite (3)
Orbitrap Eclipse (2)
Orbitrap Exploris 480 (2)
Orbitrap Fusion (2)
Orbitrap Fusion Lumos (2)
TimsTOF Pro (2)
TripleTOF 6600 (2)
Liquid Chromatography MS - alternating - reverse phase (2)
Liquid Chromatography MS - positive - reverse-phase (2)
Liquid Chromatography MS - negative - reverse-phase (2)
Liquid Chromatography MS - negative - hilic (2)
Liquid Chromatography MS - positive - hilic (2)
454 GS FLX Titanium (1)
Illumina HiSeq 2000 (1)
TripleTOF 5600+ (1)
Gas Chromatography (1)
Impact II (1)
LTQ Orbitrap (1)
Orbitrap Fusion ETD (1)
Q Exactive HF (1)
Q Exactive HF (Thermo Scientific instrument model) (1)
QTRAP 6500+ (1)

Publication Date

2015 (77)
2025 (65)
2024 (61)
2021 (38)
2026 (38)
2022 (38)
2013 (38)
2012 (32)
2023 (27)
2014 (23)
2020 (19)
2017 (18)
2016 (18)
2019 (16)
2018 (15)
2010 (9)
2011 (5)
2009 (5)
2007 (5)
2005 (1)

UNIPROT ID/AC

P29353 (2)
P60484 (2)
P63151 (1)
Q07890 (1)
Q02297 (1)
P21860 (1)
P04626 (1)
P27361 (1)
P01116 (1)
P07333 (1)
P36897 (1)
P63104 (1)
P38398 (1)
Q96GD4 (1)
P09874 (1)
P27986 (1)
Q92934 (1)
P17612 (1)
O15264 (1)
Q13315 (1)
P45985 (1)
Q16539 (1)
P46734 (1)
Q75JK0 (1)
Q16512 (1)
P31749 (1)
P04049 (1)
Q02750 (1)
Q07889 (1)
P12931 (1)

ENSEMBL ID

ENSG00000170477 (8)
ENSG00000229353 (3)
ENSG00000147251 (1)
ENSG00000247315 (1)

CHEBI ID

CHEBI:30769 (9)
CHEBI:15428 (8)
CHEBI:16737 (8)
CHEBI:16811 (7)
CHEBI:28300 (7)
CHEBI:18012 (7)
CHEBI:16199 (7)
CHEBI:22653 (6)
CHEBI:27570 (6)
CHEBI:18257 (6)
CHEBI:17154 (6)
CHEBI:7916 (6)
CHEBI:18211 (6)
CHEBI:15891 (6)
CHEBI:16359 (6)
CHEBI:29016 (6)
CHEBI:30915 (6)
CHEBI:16919 (6)
CHEBI:17368 (6)
CHEBI:17822 (5)
CHEBI:26271 (5)
CHEBI:25094 (5)
CHEBI:18237 (5)
CHEBI:17126 (5)
180533 (1)
5383 (1)
CHEBI:15552 (1)
CHEBI:16618 (1)
CHEBI:15996 (1)
CHEBI:17552 (1)

Metabolite Name

Cholic acid (4)
Catechol sulfate (3)
2-aminophenol sulfate (3)
Trimethylamine N-oxide (3)
N-acetylhistidine (3)
Hippurate (3)
Gluconate (3)
Salicylate (3)
Isovalerylglycine (3)
Urea (3)
Dimethyl sulfone (3)
Creatinine (3)
Glycine (3)
Glycerol (3)
N-acetylvaline (3)
Citrulline (3)
Succinic acid (3)
Pantothenic acid (3)
Taurocholic acid (3)
Adenine (3)
N-acetylserine (3)
Guanosine (3)
Uridine (3)
FA(17:0) (2)
FA(16:2) (2)
FA(18:3) (2)
FA(20:1) (2)
FA(20:2) (2)
FA(20:3) (2)
FA(22:1) (2)

First Public Date

2025 (73)
2024 (69)
2015 (62)
2014 (62)
2021 (41)
2023 (40)
2026 (36)
2022 (31)
2018 (29)
2019 (26)
2020 (25)
2013 (14)
2017 (10)
2016 (8)

Modelling Approach

Ordinary differential equation model (7)

Study status

Completed (6)
Active, not recruiting (3)
Not yet recruiting (3)
Not provided (2)
Recruiting (2)

Lab affiliation

Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN, USA (2)
IBMM, Univ Montpellier, CNRS, ENSCM, 34095 Montpellier, France (2)
Personalized Genomic Medicine Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB) (2)
- Platelet Research Lab, Instituto de Investigación Sanitaria del Principado de Asturias (ISPA), Oviedo, Spain - Department of Blood Cell Research, Sanquin Research and Landsteiner Laboratory, Amsterdam, The Netherlands - Department of Medicine, University of Oviedo, Oviedo, Spain (1)
1)Program for Predictive and Personalized Medicine of Cancer, Germans Trias i Pujol Research Institute (PMPPC-IGTP), 08916 Badalona, Spain 2)Cancer and Leukemia Epigenetics and Biology Program, Josep Carreras Leukaemia Research Institute (IJC), Campus ICO-GTP-UAB, 08916 Badalona, Spain (1)
1. Division of Experimental Medicine, McGill University, Montreal, QC 2. Segal Cancer Proteomics Centre, Lady Davis Institute for Medical Research, Jewish General Hospital, Montreal, QC 3. Department of Pathology, Segal Cancer Centre, Lady Davis Institute for Medical Research, Jewish General Hospital, McGill University, Montreal, QC 4. Segal Cancer Centre, Lady Davis Institute for Medical Research, Jewish General Hospital, Montreal, QC 5. Department of Oncology, McGill University, Montreal, QC (1)
1. Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Copenhagen, Denmark; 2. Proteomics and Singal Transduction, Max Planck Institute of Biochemistry, Martinsried, Germany (1)
1. School of Pharmaceutical Sciences, Faculty of Medicine, University of Ottawa, Canada. 2.Quadram Institute Bioscience, Norwich Research Park, United Kingdom (1)
1Laboratory for Neurodegenerative Diseases and Personalized Medicine, School of Molecular Cell Biology and Biotechnology, The George S. Wise Faculty for Life Sciences, Sagol School of Neurosciences, Tel Aviv University, Ramat Aviv 69978, Israel (1)
Allegheny Health Network (1)
Amsterdam UMC, Vrije Universiteit Amsterdam, Medical Oncology, Cancer Center Amsterdam, OncoProteomics Laboratory, Amsterdam, Netherlands (1)
Angiogenesis Laboratory, Centro Cardiovascular da Universidade de Lisboa (CCUL@RISE), Lisbon School of Medicine of the Universidade de Lisboa; Lisbon, 1649-028, Portugal (1)
Assistant Professor, Departments of Oncology & Pathology, McGill University Principal Investigator, Cancer Research Program, MUHC-RI 1001 Decarie Blvd, EM2.2218 514.934.1934 ext 76307 Montréal, Canada (1)
Attending Physician Medical Director, Brain Tumor Institute Principal Investigator, Center for Cancer and Immunology Research, Children Research Institute Associate Professor of Pediatrics - The George Washington University School of Medicine and Health Sciences Executive co-Chair, Childrens Brain Tumor Network www.CBTN.org (1)
Bavarian Center for Biomolecular Mass Spectrometry (BayBioMS) School of Life Sciences Technical University Munich (TUM) Gregor-Mendel-Straße 4 85354 Freising GERMANY Bavarian Center for Biomolecular Mass Spectrometry Technische Universität München Gregor-Mendel-Straße 4 85354 Freising DEUTSCHLAND / GERMANY (1)
Ben-Gurion University of the Negev (1)
Biomedical Research in Melanoma-Animal Models and Cancer Laboratory- Vall d´Hebron Research Institute VHIR-Vall d’Hebron Hospital Barcelona-UAB 08035, Spain. (1)
Center for Alzheimer’s Disease and Related Dementias (CARD) National Institute on Aging (NIA) National Institutes of Health (NIH) (1)
Centre for Proteome Research, Department of Biochemistry & Systems Biology, University of Liverpool, Liverpool L69 7ZB, UK (1)
Clinical Collaboration Unit Translational Immunology, German Cancer Consortium (DKTK), Department of Internal Medicine, University Hospital Tübingen, Tübingen, Germany (1)
Clinical Medical Research Center of Second Clinical Medical College, Jinan University, Shenzhen People's Hospital, No.1017, Dongmen North Road, Luohu District, Shenzhen 518020, China. (1)
Department of Animal Sciences, Robert H. Smith Faculty of Agriculture, Food and Environment, the Hebrew University, Rehovot 76100, Israel Center of Excellence in Agriculture and Environmental Health, the Hebrew University, Rehovot 76100, Israel (1)
Department of Biochemistry and Molecular Biology, Universitat de València, 46100 Burjassot, Spain (1)
Department of Clinical Laboratory, Shanghai Children’s Medical Center, School of Medicine, Shanghai Jiao Tong University (1)
Department of Computer Science and Engineering, University of North Texas (1)
Department of Immunology, Weizmann Institute of Science (1)
Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester MN (1)
Department of Medical Sciences, Institute of Biomedicine (iBiMED), University of Aveiro, 3810-193 Aveiro, Portugal. (1)
Department of Molecular and Integrative Physiology, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA (1)
Department of Pharmacology and Toxicology (1)

Keyword

Chemosensitivity (1)
Family medicine (1)
Genetics (1)
Personalized medicine (1)
Rehabilitation (1)
Family history (1)
Prevention (1)
Mailed FIT (1)
Cancer screening (1)

IsPrivate

False (9)

Model Flag

Non Kinetic (1)

Submitter Keywords

Immuno-oncology (1)

Study type

Transcription profiling by array (64)
RNA-seq of coding RNA (25)
Proteomic profiling by array (17)
Observational (10)
RNA-seq of non coding RNA (7)
Methylation profiling by array (6)
Interventional (6)
Comparative genomic hybridization by array (5)
Genotyping by array (4)
Other (4)
ChIP-seq (4)
DNA-seq (3)
Methylation profiling by high throughput sequencing (2)
Unknown experiment type (1)
RNA-seq of non coding RNA from single cells (1)
Human - Two-color microarray (1)
Animal - One-color microarray (1)
One-color microarray (1)
Human - High-throughput sequencing (1)
Human - One-color microarray (1)
Transcription profiling by tiling array (1)
ATAC-seq (1)
ScATAC-seq (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2025 (3979)
2022 (3104)
2023 (2772)
2021 (2737)
2024 (2632)
2020 (1751)
2019 (1149)
2018 (950)
2017 (841)
2016 (717)
2015 (656)
2026 (535)
2014 (503)
2013 (332)
2012 (217)
2011 (146)
2010 (97)
2009 (62)
2008 (23)
2007 (10)
2004 (4)
2005 (1)
2003 (1)

Location

France (4)
Cyprus (2)
Denmark (2)
Greece (2)
China (2)
Italy (2)
Spain (2)
Belgium (2)
Canada (2)
United States (2)
Slovenia (1)
India (1)
Portugal (1)
Bulgaria (1)
Sweden (1)
Poland (1)
Germany (1)
United Kingdom (1)
Switzerland (1)

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Deep sequencing of gastric carcinoma reveals somatic mutations relevant to personalized medicine

This SuperSeries is composed of the following subset Series: GSE29996: Deep sequencing of gastric carcinoma reveals somatic mutations relevant to personalized medicine [Affymetrix SNP array data] GSE29998: Deep sequencing of gastric carcinoma reveals somatic mutations relevant to personalized medici...

ORGANISM(S): Homo sapiens

2012-10-25 | E-GEOD-29999 | biostudies-arrayexpress

Expression data from Drosophila dLmo (EP1306 and BxJ) mutants

The Drosophila gene dLmo encodes a transcriptional regulator involved in wing development and behavioral responses to cocaine and ethanol. We were interested in discovering novel transcriptional targets of dLmo in the nervous system by examining gene expression changes in the heads of wild-type flie...

ORGANISM(S): Drosophila melanogaster

2011-02-01 | E-GEOD-25988 | biostudies-arrayexpress

IGNITE: Genomic Medicine Implementation - The Personalized Medicine Program

PRJNA606620 | ENA

IGNITE: Genomic Medicine Implementation - The Personalized Medicine Program

PRJNA606621 | ENA

A Quantitative Framework for Measuring Personalized Medicine Integration into US Healthcare Delivery Organizations.

Not available

S-EPMC8000405 | biostudies-literature

An eMERGE Clinical Center at Partners Personalized Medicine.

Not available

S-EPMC4810384 | biostudies-literature

Prospective molecular profiling of canine cancers provides a clinically relevant comparative model for evaluating precision medicine (PMed) trials

Feasibility trial to examine the ability to conduct molecular guided therapy in a geographically distributed systems within strict time constraints Canine patients were enrolled across a broad panel of tumor types where tumor samples were acquired and processed to preserve RNA quality for genomic an...

ORGANISM(S): Canis lupus

2014-04-28 | E-GEOD-51131 | biostudies-arrayexpress

Using a rhabdomyosarcoma patient-derived xenograft to examine precision medicine approaches and model acquired resistance.

Original patient tumor is directly implanted in mice xenografts. Tumor is propagated to multiple mice for conduct of 6 arm treatment trials and control. Therapies are selected based on T0 and F0 genomic profiles. ICE-T refractory tumor are implanted and additional 6 arm treatment trial and control c...

ORGANISM(S): Homo sapiens

2014-07-22 | E-GEOD-51130 | biostudies-arrayexpress

Bioinformatics Workflow for Clinical Whole Genome Sequencing at Partners HealthCare Personalized Medicine.

Not available

S-EPMC4810391 | biostudies-literature

Asthma pharmacogenetics and the development of genetic profiles for personalized medicine.

Not available

S-EPMC4325626 | biostudies-literature

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24299 Results

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