Pfeiffer D D - OmicsDI

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Unknown (648)
Transcriptomics (42)
Proteomics (29)
Models (7)
Genomics (5)
Metabolomics (2)
Clinical (1)
Multiomics (1)

Organisms

Schizophyllum commune H4-8 (25)
Mycobacterium tuberculosis SP7 (25)
Oryza sativa Japonica Group (25)
Eriocheir sinensis (25)
Candidatus Endoriftia persephonae (25)
Mycobacterium tuberculosis SP10 (25)
Mycobacterium tuberculosis SP13 (25)
Mycobacterium tuberculosis SP22 (25)
Enterobacter ludwigii (25)
Chlamydomonas reinhardtii (25)
Lama (25)
Pyricularia oryzae P131 (25)
Enterococcus mundtii CRL35 (25)
Pongo pygmaeus (25)
Oncorhynchus tshawytscha (25)
Pseudomonas canadensis (25)
Strongylocentrotus purpuratus (25)
Influenza A virus (A/California/04/2009(H1N1)) (25)
Homo sapiens (17)
Arabidopsis thaliana (9)
Mus musculus (9)
Halobacterium salinarum (6)
Natronomonas pharaonis (1)
cellular organisms (1)
Agrobacterium tumefaciens (1)
Yersinia enterocolitica (1)
Staphylococcus aureus (1)
Caenorhabditis elegans (1)
Saccharomyces cerevisiae (1)
Halobacterium salinarum NRC-1 (1)

Repository

biostudies-arrayexpress (47)
pride (25)
BioModels (7)
MassIVE (3)
MetaboLights (2)
PeptideAtlas (1)

Tissue

Cell culture (6)
Retina (4)
Oocyte (2)
Brain (2)
Permanent cell line cell (2)
Layer of retina (1)
Uterine endometrium (1)
Embryonic stem cell (1)
Early embryonic cell (1)
Neuron (1)
Blood plasma (1)
Embryo (1)
Lung (1)
Epithelial cell (1)

Disease

Prostate cancer (2)
Glaucoma (2)
Normal (1)
Multi-pathological condition. According with Working Group of the Sociedad Española de Medicina Interna (SEMI), a patients are defined as multi-pathological or polypathological when they have chronic diseases that belong to two or more of the eight next categories:-Category A: NYHA heart failure class II (slight limitation of physical activity, in which ordinary physical activity causes dyspnea, angina, fatigue or palpitations). Ischemic heart disease.- Category B: Vasculitis and systemic autoimmune diseases. Chronic kidney disease defined by elevated creatinine (>1.4 mg/dL in men or >1.3 mg/dL in women) or proteinuria (albumin/creatinine ratio >300 mg/g, microalbuminuria >3mg/dL in urine sample or albumin >300 mg/day in 24-hour urine, for 3 months).- Category C: Chronic respiratory disease classified as MCR grade 2 (unable to keep the pace of another person of the same age (1)
Open-angle glaucoma (1)
Bacterial gastritis (1)
Bacterial infectious disease (1)
Charcot-Marie-Tooth disease (1)
Primary open angle glaucoma (1)
Neuroblastoma (1)
COVID-19 (1)

Technology Type

Mass Spectrometry (25)
Bottom-up proteomics (6)
Affinity purification coupled with mass spectrometry proteomics (5)
Shotgun proteomics (5)
SWATH MS (3)
Gel-based experiment (3)
Mass spectrometry (2)
HDMSE (2)
Data-independent acquisition (2)
Data-dependent acquisition (2)
Top-down proteomics (2)
All-ion fragmentation (1)

Instrument Platform

Q Exactive (2)
Typhoon TRIO (1)
GenePix 4000B [Axon Instruments] (1)
Illumina NovaSeq X (1)
Illumina NovaSeq 6000 (1)
Illumina HiSeq 2000 (1)
LTQ Orbitrap XL (1)
MicrOTOF-Q I ESI-Qq-TOF (Bruker) (1)
Gas Chromatography MS - positive (1)
MicrOTOF-Q II ESI-Qq-TOF (Bruker) (1)
Unknown (1)

Publication Date

2014 (15)
2005 (6)
2013 (6)
2012 (6)
2022 (6)
2026 (5)
2010 (5)
2008 (5)
2017 (5)
2023 (4)
2011 (3)
2006 (3)
2025 (3)
2021 (3)
2024 (2)
2018 (2)
2020 (2)
2016 (2)
2015 (1)
2007 (1)

CHEBI ID

CHEBI:15895 (1)
CHEBI:37661 (1)
CHEBI:74105 (1)
CHEBI:28800 (1)
CHEBI:33511 (1)
CHEBI:16384 (1)
CHEBI:24266 (1)
CHEBI:17521 (1)
CHEBI:17566 (1)
CHEBI:45658 (1)
CHEBI:17992 (1)
CHEBI:15584 (1)
CHEBI:16433 (1)
CHEBI:30653 (1)
CHEBI:33508 (1)
CHEBI:26271 (1)
CHEBI:25094 (1)
CHEBI:18237 (1)
CHEBI:15356 (1)
CHEBI:22660 (1)
CHEBI:22653 (1)
CHEBI:17981 (1)
CHEBI:18186 (1)
CHEBI:28757 (1)
CHEBI:26986 (1)
CHEBI:22652 (1)
CHEBI:16811 (1)
CHEBI:17234 (1)
CHEBI:28300 (1)
CHEBI:18257 (1)

Metabolite Name

O-acetyl-Serine (1)
5-caffeoyl-trans-Quinic acid (1)
3-caffeoyl-trans-Quinic acid (1)
2-methyl-Malic acid (1)
2-oxo-Glutaric acid (1)
2-hydroxy-Glutaric acid (1)
Gluconic acid-1,5-lactone (1)
N-acetyl-Galactosamine (1)
Galactonic acid-1,4-lactone (1)
S-methyl-Cysteine (1)
4-hydroxy-trans-Cinnamic acid (1)
2-Aminobutanoic acid (1)
D-Glucose-6-phosphate (1)
Glucopyranose (1)
Ribonic acid (1)
Trans-Caffeic acid (1)
Cysteine (1)
2-hydroxybutanoic acid (1)
Fructose-6-phosphate (1)
Phosphoric acid (1)
Trans-Ferulic acid (1)
Leucine (1)
Glycine (1)
Beta-alanine (1)
4-hydroxybenzoic acid (1)
Glycolic acid (1)
Valine (1)
Pyroglutamic acid (1)
Gluconic acid (1)
Indole-3-acetonitrile (1)

IsPrivate

False (7)

Model Flag

Non Kinetic (2)

Modelling Approach

Ordinary differential equation model (6)

Study status

Not yet recruiting (1)

Study type

Transcription profiling by array (28)
RNA-seq of coding RNA (10)
ChIP-seq (5)
Comparative genomic hybridization by array (2)
MicroRNA profiling by array (1)
Methylation profiling by array (1)
Interventional (1)

Release Date

2023 (65)
2024 (57)
2022 (56)
2025 (54)
2021 (49)
2014 (44)
2020 (43)
2018 (42)
2019 (40)
2012 (33)
2017 (32)
2015 (28)
2013 (28)
2016 (24)
2011 (21)
2008 (17)
2010 (15)
2009 (14)
2026 (9)
2007 (6)
2006 (6)
2004 (3)
2003 (2)
2002 (2)
1999 (2)
2005 (1)
2000 (1)
1998 (1)

Lab affiliation

Charité – Universitätsmedizin Berlin, Department of Biochemistry, 10117 Berlin, Germany; The Francis Crick Institute, Molecular Biology of Metabolism Laboratory, London NW11AT, UK (2)
Institute for Immunology, University Medical Center Mainz. Langenbeckstr. 1 55131 Mainz, Germany (1)
Instiute for Microbiology (1)
Technical University of Munich (TUM), TUM School of Natural Sciences, Department Bioscience, Chair of Organic Chemistry II, Center for Functional Protein Assemblies (CPA), Ernst-Otto-Fischer Str. 8, Garching 85748, Germany (1)
University Medical Center Mainz, Germany, Institute for Immunology (1)
Experimental Ophthalmology, University Medical Center Mainz (1)
Experimental Ophthalmology, Department of Ophthalmology, Mainz, Rheinland-Pfalz, Germany (1)
Department of Microbial Proteomics, Institute of Microbiology, Center for Functional Genomics of Microbes, University of Greifswald, Felix-Hausdorff-Str. 8, 17489 Greifswald, Germany (1)
Department of Gene Regulation Friedrich Miescher Institutefor Biomedical Research (1)
Corresponding author of research, responsible for contracting Mass Spec services at CeMM (1)
Max Planck Institute for Molecular Biomedicine Biomolecular Mass Spectrometry Unit Röntgenstr. 20 D-48149 Münster Germany (1)
Interfaculty Institute of Biochemistry, University of Tübingen, Tübingen, Germany Gene and RNA Therapy Center (GRTC), Faculty of Medicine, University of Tübingen, Tübingen, Germany iFIT Cluster of Excellence (EXC2180) "Image-Guided and Functionally Instructed Tumor Therapies, University of Tübingen, Tübingen, Germany (1)
Corresponding author on the publication and contracted services for MS analysis at CeMM. (1)
Max Planck Institute for Molecular Biomedicine, Bioanalytical Mass Spectrometry, Röntgenstr. 20, D-48149 Münster Germany (1)
Oerthbio (1)
Translational and Experimental Ophthalmology, University Medical Center in Mainz (1)
Sequence database group (1)
Experimental Ophthalmology, Medical Care Center in Mainz, Germany (1)
Chair of Proteomics and Bioanalytics, Technical University of Munich, Bavaria, Germany (1)
TUM School of Natural Sciences, Department Biosciences, Chair of Organic Chemistry II, Center for Functional Protein Assemblies (CPA), Technical University Munich (TUM); Ernst-Otto-Fischer Str. 8, 85748 Garching, Germany (1)
University of Pennsylvania, Department of Biology (1)
Department of Gene Regulation Friedrich Miescher Institute for Biomedical Research (1)
Charite- Universitaetsmedizin Berlin, 10117 Berlin, Germany (1)
Department of Experimental Ophthalmology, Medical Center of the Johannes Gutenberg-University Mainz, Langenbeckstr. 1, 55131 Mainz, Germany Phone: + 49 6131 17 3328 Fax: + 49 06131 4970563 (1)

Location

Colombia (1)

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Revision of the carnivorous snail genus Discartemon Pfeiffer, 1856, with description of twelve new species (Pulmonata, Streptaxidae).

Not available

S-EPMC4023267 | biostudies-literature

D-Glucosamine supplementation extends life span of nematodes and of ageing mice.

Not available

S-EPMC3988823 | biostudies-literature

Supplemental Vitamin D Increased Serum Total 25-Hydroxyvitamin D in the US Adult Population During 2007-2014.

Not available

S-EPMC8349116 | biostudies-literature

PREDICT: untargeted metabolomic profiling in a Brassica napus (canola) breeding population by GC-MS

Genome-wide association studies (GWAS) identified thousands of genetic loci associated with complex plant traits, including many traits of agronomical importance. However, functional interpretation of GWAS results remains challenging because of large candidate regions due to linkage disequilibriu...

2023-11-20 | MTBLS8056 | MetaboLights

RNA-seq of C.elegans and M.musculus in the presence and absence of D-Glucosamine (GlcN)

D-Glucosamine (2-amino-2-deoxy-D-glucose, C.A.S.# 3416-24-8) (GlcN) is a freely available and commonly used dietary supplement possibly promoting cartilage health in humans which also acts as an inhibitor of glycolysis. We here find that GlcN extends C. elegans lifespan by impairing glucose metaboli...

ORGANISM(S): Mus musculus

2014-03-07 | E-GEOD-54853 | biostudies-arrayexpress

Chiral micellar electrokinetic chromatographic separation for determination of L- and D-primary amines released from murine islets of Langerhans.

Not available

S-EPMC6502259 | biostudies-literature

The fibroblast growth factor receptor 2 p.Ala172Phe mutation in Pfeiffer syndrome--history repeating itself.

Not available

S-EPMC3652025 | biostudies-literature

Vitamin D status in the United States, 2011-2014.

Not available

S-EPMC7263437 | biostudies-literature

A candidate reference measurement procedure for quantifying serum concentrations of 25-hydroxyvitamin D₃ and 25-hydroxyvitamin D₂ using isotope-dilution liquid chromatography-tandem mass spectrometry.